| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mutL [H]
Identifier: 91781911
GI number: 91781911
Start: 593976
End: 596042
Strand: Reverse
Name: mutL [H]
Synonym: Bxe_A3934
Alternate gene names: 91781911
Gene position: 596042-593976 (Counterclockwise)
Preceding gene: 91781913
Following gene: 91781910
Centisome position: 12.17
GC content: 67.59
Gene sequence:
>2067_bases ATGTCCGAATTCTCCGAAACGCCTGCCGGCCTCGACACCGCAGCCGCGCCCGCGGTTTCCGCCGCCACGCCCGCGCCGCG CCCGTTGCGCGCGATCCAGCCCCTTCCCGATCAGTTGATCAGTCAGATTGCCGCCGGCGAAGTGGTCGAGCGGCCCGCTT CGGTCGTCAAGGAGCTGCTGGAAAATGCACTCGACGCGGGCGCGCAGTCGCTGCGCATCCTGCTCGACGAAGGCGGCGTC AAACGCATCTCGATCACCGACGACGGCTGCGGCATCCCCGAGAACGAACTCGCGCTGGCGCTGATGCGTCACGCCACCAG CAAAATCCGCTCGCTCGCCGAACTGGAAGCGGTCGCTACGCTGGGGTTCCGCGGCGAGGCGCTGGCCTCGATCGCCTCGG TCGCGCAGATGACCATCACGAGCCGCACGGCCGACGCGGCGCACGCGGTGCGCGTGGATGCGCAAACCGGCGTGCTGAGT CCCGCGGCCGGCACCCAGGGCACCACGATCGAAGTCCGCGAGTTGTACTTCAATACGCCGGCGCGCCGTAAATTTCTGAA GAGCGAGCAGACCGAACTCGGCCATTGTCTCGAACAGATCCGCCGCGCCGCGCTGGCGCGGCCGGATGTCGCGATTTCGG TGCTGCATAACGGCAAGGCGGTCGAACACTGGAACGCCAGCGAGCCGCCCGTGCGGGTCGCGAAGATTCTCGGCGACACG TTTGCCACCGCTCATCTGCCGCTCGACGAATCCGCCGGACCGCTTGCGGTCTACGGTTGCGCGGGTCTGCCGACCGCGAG CCGCGGGCGTGCCGATCAGCAGTATTTCTTCGTCAACGGCCGCTTCGTGCGCGACAAGCTGCTCACGCACGCCGTGCGCG CCGCTTATGAAGACGTGCTGCATGGCGAGCGCTATCCGTCCTACGTGCTGTTCCTCGACCTGCCGCCTGAAGCGGTCGAT GTGAACGTGCATCCGTCGAAAATCGAGGTGCGCTTCCGCGATTCGCGCTCGATTCACCAGTTCGTCTTCCACGCCGTGCA GCGCGCGCTGGCGCGGCATGCGGGCGCATCGCCGGAAACGACGGCGGGCGGGCATGCGGCGCATCTGGCGCCTTCCGTTA GCGGGCCGGCTTCGTTTGGCGCGACGCCACTGGGCGGCGCGGGCGTCGGCGGCGTCGGCTTCGGTGCTGGCAACGGCGCT GGCGGCATCGGTGGCGGCTTGGGTGGCGCATCGGGCGGCGGCTTCGGATCGTCGTCGCAGCAGCCCGGCAATACCTGGAT GCGCCAGGCGCGCATGACGCAAGGCACGCTGCCGGTTGCCCAACCGCTCGCGTTTTACGACGCGCTCTTCGGCCGCAAAG ATACGAACGCGGGCACGGCGGAAGGCGCCACGCTTTTCGAGGCGCGCGATTCGGCCGCCGAAGCACCGTCACCGTACAAC GCGTCCGCGCCGTACCCGGCGCCCGCTTTCCATGCCGCCGACGAGCAACCGCTCGGCTTCGCGCTCGGCCAGATCCACGG CATCTATGTGCTGGCCCAGAACGCGCACGGTCTGGTGATCGTCGACATGCACGCCGCGCACGAGCGCATTCTGTACGAGC AGTTCAAGAACGCGCTGGCCGATCGCACGATCGCCGTGCAACCGCTGCTGATCCCGCAGTCCATGCAGGCCGATCCGGTC GAAATCGGTACGGTGGAAGAAGAGCGCGACACACTCGACGCACTCGGCTTCGATCTCGCCGTGCTGTCGCCGACCACACT CGCCATCCGCGCCGTACCGGCGCTGCTGAAAGACGCCGATCTGCAGGCGCTGGCGCGCGCGGTCCTCTCCGACCTGCATG CATTCGGCGGCTCGCGCGTACTGACCGAACGTCAGCACGAACTGCTCGGCACGCTCGCCTGCCATCACGCGGTGCGCGCG AACCGGCGTCTGACGCTCGACGAAATGAACGCGCTGCTGCGTCAGATGGAAGCCACCGAGCGCGCCGATCAATGCAATCA CGGACGTCCCACGTGGTATCAGTTGACGCTGTCCGATCTCGATCGGCTGTTCATGCGTGGTCAGTGA
Upstream 100 bases:
>100_bases CATGATACAGAAAGTGCCCGGCGGCATTTAAAAATCTCCCGCGCCACGGTGCGCTTGCGCGCGCCGCGAGCTTGCCGCGC CGAATCGCTATAATTTCGCC
Downstream 100 bases:
>100_bases CGTGACGCTGCTGCAACCGCCGCTGCAACGCACGCCCGCCTGCCCATGACTTCACGCACGCCTACCACCGTCCCGTGTCT GCTCGGCCCGACTGCATCCG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSEFSETPAGLDTAAAPAVSAATPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQSLRILLDEGGV KRISITDDGCGIPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVRVDAQTGVLS PAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARPDVAISVLHNGKAVEHWNASEPPVRVAKILGDT FATAHLPLDESAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVD VNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPSVSGPASFGATPLGGAGVGGVGFGAGNGA GGIGGGLGGASGGGFGSSSQQPGNTWMRQARMTQGTLPVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYN ASAPYPAPAFHAADEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSMQADPV EIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRA NRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMRGQ
Sequences:
>Translated_688_residues MSEFSETPAGLDTAAAPAVSAATPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQSLRILLDEGGV KRISITDDGCGIPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVRVDAQTGVLS PAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARPDVAISVLHNGKAVEHWNASEPPVRVAKILGDT FATAHLPLDESAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVD VNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPSVSGPASFGATPLGGAGVGGVGFGAGNGA GGIGGGLGGASGGGFGSSSQQPGNTWMRQARMTQGTLPVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYN ASAPYPAPAFHAADEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSMQADPV EIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRA NRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMRGQ >Mature_687_residues SEFSETPAGLDTAAAPAVSAATPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQSLRILLDEGGVK RISITDDGCGIPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVRVDAQTGVLSP AAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARPDVAISVLHNGKAVEHWNASEPPVRVAKILGDTF ATAHLPLDESAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVDV NVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPSVSGPASFGATPLGGAGVGGVGFGAGNGAG GIGGGLGGASGGGFGSSSQQPGNTWMRQARMTQGTLPVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYNA SAPYPAPAFHAADEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSMQADPVE IGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRAN RRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=36.0606060606061, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI189458898, Length=355, Percent_Identity=28.4507042253521, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI4505911, Length=355, Percent_Identity=28.4507042253521, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI310128478, Length=347, Percent_Identity=26.5129682997118, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4505913, Length=347, Percent_Identity=26.5129682997118, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI189458896, Length=338, Percent_Identity=28.9940828402367, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI263191589, Length=235, Percent_Identity=33.1914893617021, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI310128480, Length=300, Percent_Identity=24.6666666666667, Blast_Score=96, Evalue=8e-20, Organism=Escherichia coli, GI1790612, Length=331, Percent_Identity=51.0574018126888, Blast_Score=311, Evalue=8e-86, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.6875, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17562796, Length=409, Percent_Identity=23.4718826405868, Blast_Score=131, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=314, Percent_Identity=34.7133757961783, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=361, Percent_Identity=26.5927977839335, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6325093, Length=707, Percent_Identity=20.0848656294201, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323063, Length=449, Percent_Identity=23.162583518931, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI17136968, Length=310, Percent_Identity=34.5161290322581, Blast_Score=169, Evalue=7e-42, Organism=Drosophila melanogaster, GI17136970, Length=382, Percent_Identity=26.9633507853403, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 72856; Mature: 72725
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFSETPAGLDTAAAPAVSAATPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELL CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENALDAGAQSLRILLDEGGVKRISITDDGCGIPENELALALMRHATSKIRSLAELEAVAT HHHHHCCHHHEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRGEALASIASVAQMTITSRTADAAHAVRVDAQTGVLSPAAGTQGTTIEVRELYFNTP CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHCCH ARRKFLKSEQTELGHCLEQIRRAALARPDVAISVLHNGKAVEHWNASEPPVRVAKILGDT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHH FATAHLPLDESAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVL HHEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH HGERYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET CCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC TAGGHAAHLAPSVSGPASFGATPLGGAGVGGVGFGAGNGAGGIGGGLGGASGGGFGSSSQ CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPGNTWMRQARMTQGTLPVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYN CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC ASAPYPAPAFHAADEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALA CCCCCCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH DRTIAVQPLLIPQSMQADPVEIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDAD CCEEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCC LQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RADQCNHGRPTWYQLTLSDLDRLFMRGQ HHHHCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure SEFSETPAGLDTAAAPAVSAATPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELL CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENALDAGAQSLRILLDEGGVKRISITDDGCGIPENELALALMRHATSKIRSLAELEAVAT HHHHHCCHHHEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRGEALASIASVAQMTITSRTADAAHAVRVDAQTGVLSPAAGTQGTTIEVRELYFNTP CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHCCH ARRKFLKSEQTELGHCLEQIRRAALARPDVAISVLHNGKAVEHWNASEPPVRVAKILGDT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHH FATAHLPLDESAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVL HHEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH HGERYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET CCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC TAGGHAAHLAPSVSGPASFGATPLGGAGVGGVGFGAGNGAGGIGGGLGGASGGGFGSSSQ CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPGNTWMRQARMTQGTLPVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYN CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC ASAPYPAPAFHAADEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALA CCCCCCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH DRTIAVQPLLIPQSMQADPVEIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDAD CCEEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCC LQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RADQCNHGRPTWYQLTLSDLDRLFMRGQ HHHHCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]