| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is dgk [H]
Identifier: 91781888
GI number: 91781888
Start: 571617
End: 572297
Strand: Reverse
Name: dgk [H]
Synonym: Bxe_A3957
Alternate gene names: 91781888
Gene position: 572297-571617 (Counterclockwise)
Preceding gene: 91781889
Following gene: 91781887
Centisome position: 11.69
GC content: 63.14
Gene sequence:
>681_bases ATGAATTCATCGCCGCTCACCGTCACGGCGCCGCAGCTGCGGCCGCCGTTCGGCTATCTCGCGATCGAAGGCCCGATCGG CGTCGGCAAGACGTCGCTCGCACGGCGCCTCGCGCAGCGCTGGTCGATGCAGGAAATGTTCGAACGGCCGCAAGATAATC CGTTTCTCGAACGCTTTTACCGCGACACCGTGCGTTACGCGTTGCCCACGCAATTGCACTTCGCCTTGCAACGCGCGCAG CAGGCTCAGGACGTGAGCGCGGCGCACCTGTCGGGCACGCCGCTGATCGCCGATTTCATGACGCAGAAGAACGACATCTT CGCGCGTCTGACGCTACAGGAAGACGAGTGGCAGTTGTATCGCGCGCTTGCCGCGCGGCTCGAAGTCAGCGCGCCGGCGC CGGACTTCGTGGTCTATCTGCAGGCGAGCCCGGAGGTGCTGTTCGCGCGCATCCAGAAGCGCGCGGTGCCGATGGAGCTA CAGATTTCCGACGCCTATCTGCACGCCCTGTGCGATGCGTACAACGAATTTTTCTATCACTACGACCGCACGCCCGTGCT GACGGTCAACGCCGAACACCTGAATCCGCTCGACTCGGACGCGGACCTTGCGCTGCTTGCCGAACGCATCGAGACCATGC GCGGCCGCAAGGAATTCTTTGTCAAAGGCACGTCGCTCTGA
Upstream 100 bases:
>100_bases TGAGCGATCAACGCATCGAGAAGGTGAAAGGACCTTGCCAGTGTCCTATGCTCAACGCGTTGACCGTCGGTGAAGACAAA ACCGGCAAGGGCCGCTGCGA
Downstream 100 bases:
>100_bases GCGGCACGGCCACCTCTTTTTTCTCAACGGATTGACCCATGACCTATTTGCAGGAAGCGAGCCGGAACGCCGTCACCGTG CCGAAACTGCAGGCAATGCG
Product: putative deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNSSPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQEMFERPQDNPFLERFYRDTVRYALPTQLHFALQRAQ QAQDVSAAHLSGTPLIADFMTQKNDIFARLTLQEDEWQLYRALAARLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMEL QISDAYLHALCDAYNEFFYHYDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL
Sequences:
>Translated_226_residues MNSSPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQEMFERPQDNPFLERFYRDTVRYALPTQLHFALQRAQ QAQDVSAAHLSGTPLIADFMTQKNDIFARLTLQEDEWQLYRALAARLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMEL QISDAYLHALCDAYNEFFYHYDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL >Mature_226_residues MNSSPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQEMFERPQDNPFLERFYRDTVRYALPTQLHFALQRAQ QAQDVSAAHLSGTPLIADFMTQKNDIFARLTLQEDEWQLYRALAARLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMEL QISDAYLHALCDAYNEFFYHYDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 25808; Mature: 25808
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQEMFERPQDNPFLERFY CCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RDTVRYALPTQLHFALQRAQQAQDVSAAHLSGTPLIADFMTQKNDIFARLTLQEDEWQLY HHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCEEEEEEEECHHHHHH RALAARLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAYLHALCDAYNEFFYH HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHEE YDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL CCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCC >Mature Secondary Structure MNSSPLTVTAPQLRPPFGYLAIEGPIGVGKTSLARRLAQRWSMQEMFERPQDNPFLERFY CCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RDTVRYALPTQLHFALQRAQQAQDVSAAHLSGTPLIADFMTQKNDIFARLTLQEDEWQLY HHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCEEEEEEEECHHHHHH RALAARLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAYLHALCDAYNEFFYH HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHEE YDRTPVLTVNAEHLNPLDSDADLALLAERIETMRGRKEFFVKGTSL CCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]