Click here to switch to the map view.

The map label for this gene is glyQ [H]

Identifier: 91781833

GI number: 91781833

Start: 503090

End: 504097

Strand: Reverse

Name: glyQ [H]

Synonym: Bxe_A4012

Alternate gene names: 91781833

Gene position: 504097-503090 (Counterclockwise)

Preceding gene: 91781834

Following gene: 91781832

Centisome position: 10.3

GC content: 61.9

Gene sequence:

>1008_bases
ATGCTCACGTTTCAGCAAATCATCCTGACAATGCAGTCGTACTGGGACAAGCAGGGTTGCGCGTTGCTCCAGCCAATCGA
CATGGAAGTCGGCGCGGGCACGTCCCACGTCCATACTTTCCTGCGCGCGATCGGCCCCGAGCCGTGGCGCGCGGCGTACG
TGCAACCGTCGCGCCGTCCGAAAGACGGCCGCTACGGCGAGAACCCGAACCGTCTGCAGCACTACTACCAGTACCAGGTG
GTGCTCAAGCCGGCGCCGGAAAATATCCTCGACCTGTACCTCGGCTCGCTCGAAGCCCTCGGCTTCGACCTGAAGCAGAA
CGACGTGCGCTTCGTGGAAGACGACTGGGAAAACCCCACGCTCGGCGCCTGGGGTCTCGGCTGGGAAGTGTGGCTGAACG
GCATGGAAGTGACCCAGTTCACCTACTTCCAGCAGGTTGGCGGTCTGGACTGCAAGCCGGTGCTCGGCGAAATCACGTAT
GGCCTCGAGCGCCTCGCCATGTATTTGCAGAAGGTCGAAAACGTCTACGACCTGGTCTGGACGGAGTGGGAAGAGCAAGG
CCCGAACGGCCCCGAACTGCGTCGCCTGACTTATGGCGACGTCTACCATCAGAACGAAGTCGAACAGTCCGCCTACAACT
TCGAGCACGCGAACGTCGAGTTGCTGTTCTCGATCTTCAACAGCTACGAAGCCGAAGCCAAACGCATGATCGAAGCGCAG
ATCGCGCTGCCCGCCTATGAGCTGGTGCTGAAAGCCGGCCACACGTTCAACCTGCTCGACGCGCGCGGCGCCATTTCGGT
CACGGAACGCGCGGCATATATCGGCCGCATTCGTGCGCTGTCGAAGCTGGTCGCCCAGGCTTACTACGATTCGCGCGAGA
AGCTCGGTTTCCCGATGCTCGGCAATCCGGTGCACGGCGTACCCGGCCTCACGACTGACGAACAGGACGCCGCCATGCCC
GCATGGGCGCCGCCGCTGAAAGTCGAACGCAAGATCGACCAGGACTGA

Upstream 100 bases:

>100_bases
CCTCCCTTTCCGTTAAAATCTCTGGTTTAGCACTTCGCTCCACGGCCACCCCGGCGCGCTTCGGCGTTCACGGCGCGGCC
CCATGCCCGAAAGGCACTTC

Downstream 100 bases:

>100_bases
CGAGAACATCAAGAAATGACTCAACCCCATCAAGCTACCCTGCTCGTCGAGCTGCTGACCGAAGAATTGCCGCCGAAAGC
GCTCGCGCGTCTCGGCGACG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLTFQQIILTMQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLTYGDVYHQNEVEQSAYNFEHANVELLFSIFNSYEAEAKRMIEAQ
IALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSKLVAQAYYDSREKLGFPMLGNPVHGVPGLTTDEQDAAMP
AWAPPLKVERKIDQD

Sequences:

>Translated_335_residues
MLTFQQIILTMQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLTYGDVYHQNEVEQSAYNFEHANVELLFSIFNSYEAEAKRMIEAQ
IALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSKLVAQAYYDSREKLGFPMLGNPVHGVPGLTTDEQDAAMP
AWAPPLKVERKIDQD
>Mature_335_residues
MLTFQQIILTMQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLTYGDVYHQNEVEQSAYNFEHANVELLFSIFNSYEAEAKRMIEAQ
IALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSKLVAQAYYDSREKLGFPMLGNPVHGVPGLTTDEQDAAMP
AWAPPLKVERKIDQD

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=302, Percent_Identity=70.1986754966888, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 38226; Mature: 38226

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQQIILTMQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGLERLAMYLQKVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEQGPNGPELRRLTYGDVYHQNEVEQSAYNFEHANVELLFSIFNSYEAEAKRMIEAQ
HHHHHCCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSKLVAQAYYDSREKLGFPML
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPVHGVPGLTTDEQDAAMPAWAPPLKVERKIDQD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MLTFQQIILTMQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGLERLAMYLQKVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEQGPNGPELRRLTYGDVYHQNEVEQSAYNFEHANVELLFSIFNSYEAEAKRMIEAQ
HHHHHCCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSKLVAQAYYDSREKLGFPML
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPVHGVPGLTTDEQDAAMPAWAPPLKVERKIDQD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]