| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tpm [H]
Identifier: 91781799
GI number: 91781799
Start: 462084
End: 462707
Strand: Direct
Name: tpm [H]
Synonym: Bxe_A4046
Alternate gene names: 91781799
Gene position: 462084-462707 (Clockwise)
Preceding gene: 91781798
Following gene: 91781800
Centisome position: 9.44
GC content: 67.79
Gene sequence:
>624_bases ATGAGCGATCCGACCCAACCCGCCGTGCCCGACTTCGAAACGCGCGATCCCAACTCACCCGCTTTCTGGGACGAGCGTTT CGAGCGCCGTTTCACGCCTTGGGATCAGGCTGGCGTGCCGGCCGCGTTTCAGTCGTTCGCCGCCCGCCACAGCGGCGCGG CCGTACTGATTCCGGGCTGCGGCAGTGCCTACGAAGCGGTGTGGCTGGCCGGACAGGGCAACCCGGTCCGGGCCATCGAC TTTTCACCGGCCGCCGTCGCGGCGGCGCATGAGCAACTGGGTGCGCAGCACGCGCAACTGGTGGAACAGGCGGACTTCTT CACCTATGAACCGCCGTTCACGCCCGCGTGGATTTACGAGCGCGCATTCCTCTGCGCGCTGCCGCTCGCCCGCCGCGCGG ACTATGCGCACCGGATGGCGGATCTGTTGCCCGGCGGCGCGTTGCTCGCGGGCTTCTTTTTCCTTGGCGCGACGCCGAAA GGGCCGCCGTTCGGCATCGAGCGCGCGGAGCTCGATGCGCTGCTCACGCCGTACTTCGACTTGATCGAAGACGAAGCCGT GCACGATTCGATTGCCGTTTTCGCGGGACGTGAGCGCTGGCTAACCTGGCGCCGCCGCGCCTGA
Upstream 100 bases:
>100_bases TGCTGCTGTTCGGTGTGGCGGTGGGTGTCGGCGCGGCGCTGGCGCGGGTGTTTCTGGCGCTCGCTTACGGCGGCTGAATG CAATCCCCAGGAGGCACTTG
Downstream 100 bases:
>100_bases ACGCGCGGCTGTGGCGCGTCACGGCCGCGCGGACCGGACTTGATTCGACAGCGGCCGCCCCCACTTGAATGGACGGCGGC TGCGTCGGGCGCTCGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Thiopurine methyltransferase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSDPTQPAVPDFETRDPNSPAFWDERFERRFTPWDQAGVPAAFQSFAARHSGAAVLIPGCGSAYEAVWLAGQGNPVRAID FSPAAVAAAHEQLGAQHAQLVEQADFFTYEPPFTPAWIYERAFLCALPLARRADYAHRMADLLPGGALLAGFFFLGATPK GPPFGIERAELDALLTPYFDLIEDEAVHDSIAVFAGRERWLTWRRRA
Sequences:
>Translated_207_residues MSDPTQPAVPDFETRDPNSPAFWDERFERRFTPWDQAGVPAAFQSFAARHSGAAVLIPGCGSAYEAVWLAGQGNPVRAID FSPAAVAAAHEQLGAQHAQLVEQADFFTYEPPFTPAWIYERAFLCALPLARRADYAHRMADLLPGGALLAGFFFLGATPK GPPFGIERAELDALLTPYFDLIEDEAVHDSIAVFAGRERWLTWRRRA >Mature_206_residues SDPTQPAVPDFETRDPNSPAFWDERFERRFTPWDQAGVPAAFQSFAARHSGAAVLIPGCGSAYEAVWLAGQGNPVRAIDF SPAAVAAAHEQLGAQHAQLVEQADFFTYEPPFTPAWIYERAFLCALPLARRADYAHRMADLLPGGALLAGFFFLGATPKG PPFGIERAELDALLTPYFDLIEDEAVHDSIAVFAGRERWLTWRRRA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TPMT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022474 - InterPro: IPR008854 - InterPro: IPR016822 [H]
Pfam domain/function: PF05724 TPMT [H]
EC number: =2.1.1.67 [H]
Molecular weight: Translated: 22850; Mature: 22719
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPTQPAVPDFETRDPNSPAFWDERFERRFTPWDQAGVPAAFQSFAARHSGAAVLIPGC CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC GSAYEAVWLAGQGNPVRAIDFSPAAVAAAHEQLGAQHAQLVEQADFFTYEPPFTPAWIYE CCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH RAFLCALPLARRADYAHRMADLLPGGALLAGFFFLGATPKGPPFGIERAELDALLTPYFD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LIEDEAVHDSIAVFAGRERWLTWRRRA HHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure SDPTQPAVPDFETRDPNSPAFWDERFERRFTPWDQAGVPAAFQSFAARHSGAAVLIPGC CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC GSAYEAVWLAGQGNPVRAIDFSPAAVAAAHEQLGAQHAQLVEQADFFTYEPPFTPAWIYE CCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH RAFLCALPLARRADYAHRMADLLPGGALLAGFFFLGATPKGPPFGIERAELDALLTPYFD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LIEDEAVHDSIAVFAGRERWLTWRRRA HHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA