| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781796
Identifier: 91781796
GI number: 91781796
Start: 458677
End: 459669
Strand: Direct
Name: 91781796
Synonym: Bxe_A4049
Alternate gene names: NA
Gene position: 458677-459669 (Clockwise)
Preceding gene: 91781795
Following gene: 91781797
Centisome position: 9.37
GC content: 66.06
Gene sequence:
>993_bases ATGTCCGATTCAGGTGTGTTATCTCCCCGTAAGGTTAAGCGGTCGTTGGTGAGAAGAATCGGACTGATCGCGATGGTCGG TCTGATCATGGCCGGCTCCCTCGCTTCGCTCGATGCGGAAGCTCGCCGCATGGGCGGTGGCCGTAGTATTGGCCGTCAGT CGAATAGCGTGACGCAGCAGTCCGCGCCGTCGCAACCTTCCCAAGGCAATCAGGCCATGCAGCAGCGTGCGCAGCCTGCC CCGGCGCCCGCGCCGGCTCCGGCCGCGCAACCTAACCGCTCGCGCTGGCTGGGGCCGATCGCCGGTCTGGCGGCCGGTCT CGGCATCGCCGCGCTGTTGTCGCACTTCGGTCTGGGCGGCGCGTTCGCGGGCGCGATGGCCAATATCATCGTGATTGCGA TCATCGCCATGATCGGTATCTGGCTGATCCGCCGCTTCATGGGGCGCAAACGCGACACGTCTCAACCGGCGTACGCGGGC GGCTCGCCGTCGCTCAACTCGAGCGGCATGGGCTACTCGCAGGAACCGCGTTATACCGCGCCGCCCACCGGCTCCTACCT CGAACCGCAAGGCAACCCGCTGAGCACGCCGGCCATCAACACCGCGCCCGCCGTGCCGGCCGGCTTCGATTCGGAAGCGT TCCTGCGCAACGCCAAGGTCTACTTCGTGCGCCTGCAAGCCGCATGGGACGTCGGCAACACGGAAGACATCCGCGAATTC ACCACGCCGGAAATGTTCGCCGAGGTGAAGGTCGATCTGTCTTCGCGTGGTGCCGAGACGAATCAGACAGACGTGGTGCA ACTGAACGCCGAGTTGCTGGGCGTGGAAGAGCGCGCGAACGAATACTTCGCCAGCGTCCGCTTCTCGGGCCTGATCCGCG AAGCGCCGGGCGCGGCGGCGGAACCCTTCGTCGAAGTCTGGAACCTGTCCAAGGCGAACCGCGCCGGCGAAGGCTGGCTG CTGGCCGGCATCCAGCAGGTGGCGCAGCACTGA
Upstream 100 bases:
>100_bases GCGTCAAATATTACAATTTGTCAGCTGGCGTGGTAGCTTTACATGTGGGGACCAAATACTAGGGTCCCTAACCCGTCGAT TTTTAAAGGAAAGTACGAAA
Downstream 100 bases:
>100_bases GACGACAGCGCGCCGGGGTCGCGTGAGGGCTGCATGACCTGACCTGGCTCATGAGGTTGGCCGTTCGGCATAGCGAGCCG CGAAGCCAACGGACGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSDSGVLSPRKVKRSLVRRIGLIAMVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQSAPSQPSQGNQAMQQRAQPA PAPAPAPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGAMANIIVIAIIAMIGIWLIRRFMGRKRDTSQPAYAG GSPSLNSSGMGYSQEPRYTAPPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREF TTPEMFAEVKVDLSSRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAAEPFVEVWNLSKANRAGEGWL LAGIQQVAQH
Sequences:
>Translated_330_residues MSDSGVLSPRKVKRSLVRRIGLIAMVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQSAPSQPSQGNQAMQQRAQPA PAPAPAPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGAMANIIVIAIIAMIGIWLIRRFMGRKRDTSQPAYAG GSPSLNSSGMGYSQEPRYTAPPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREF TTPEMFAEVKVDLSSRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAAEPFVEVWNLSKANRAGEGWL LAGIQQVAQH >Mature_329_residues SDSGVLSPRKVKRSLVRRIGLIAMVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQSAPSQPSQGNQAMQQRAQPAP APAPAPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGAMANIIVIAIIAMIGIWLIRRFMGRKRDTSQPAYAGG SPSLNSSGMGYSQEPRYTAPPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREFT TPEMFAEVKVDLSSRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAAEPFVEVWNLSKANRAGEGWLL AGIQQVAQH
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34868; Mature: 34737
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSGVLSPRKVKRSLVRRIGLIAMVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH SAPSQPSQGNQAMQQRAQPAPAPAPAPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGG CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AFAGAMANIIVIAIIAMIGIWLIRRFMGRKRDTSQPAYAGGSPSLNSSGMGYSQEPRYTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCCHHHHHHH TTPEMFAEVKVDLSSRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAA CCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EPFVEVWNLSKANRAGEGWLLAGIQQVAQH HHHHHHHCCHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SDSGVLSPRKVKRSLVRRIGLIAMVGLIMAGSLASLDAEARRMGGGRSIGRQSNSVTQQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH SAPSQPSQGNQAMQQRAQPAPAPAPAPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGG CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AFAGAMANIIVIAIIAMIGIWLIRRFMGRKRDTSQPAYAGGSPSLNSSGMGYSQEPRYTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTEDIREF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCCHHHHHHH TTPEMFAEVKVDLSSRGAETNQTDVVQLNAELLGVEERANEYFASVRFSGLIREAPGAAA CCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EPFVEVWNLSKANRAGEGWLLAGIQQVAQH HHHHHHHCCHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA