| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ubiE [H]
Identifier: 91781795
GI number: 91781795
Start: 457907
End: 458638
Strand: Direct
Name: ubiE [H]
Synonym: Bxe_A4050
Alternate gene names: 91781795
Gene position: 457907-458638 (Clockwise)
Preceding gene: 91781794
Following gene: 91781796
Centisome position: 9.35
GC content: 58.61
Gene sequence:
>732_bases ATGAGCAAAACCCACTTCGGCTTTCAATCGGTCGACGAACAGGACAAGGCGCAGAAGGTGGCGGGCGTGTTCCACTCGGT TGCCGCCAACTACGACTTGATGAACGACCTGATGTCGGGCGGGTTGCACCGGGCGTGGAAGATGTTCACGATCGCCCAGG CCAACGTGCGGCCGGGCTACAAGGTGCTCGACATCGCGGGCGGCACGGGCGACCTGTCGAAGGCGTTTGCGAAGCAGGCC GGCGAAACCGGCGAAGTCTGGCATACCGACATCAACGAATCGATGCTGCGGGTGGGCCGCGACCGTCTGCTGGACAAGGG TGTGATCACCCCGGCGCTGCTCTGCGACGCCGAGAAAATTCCCTTTCCGGACAATTACTTCGACGTGGTGACCGTGGCAT TCGGCTTGCGCAACATGACGCACAAGGACATCGCGCTGGCGGAAATGCGGCGCGTGCTGAAGCCGGCCGGGCGTCTGCTG GTGCTGGAATTTTCGAAGGTGTGGGATCCGCTCAAGAAGGTCTACGACGTCTATTCTTTCAAGGTGCTGCCGTGGTTGGG CGAGCACTTTGCGAAAGATGCCGGGAGCTATCAATACCTCGCGGAATCGATCCGGATGCATCCGGACCAGGAAACTTTAA AAACAATGATGGAACAAGCGGGCCTGGACGGCGTCAAATATTACAATTTGTCAGCTGGCGTGGTAGCTTTACATGTGGGG ACCAAATACTAG
Upstream 100 bases:
>100_bases CCAGGCCGGCGCTGCGCACGGGCACTGTCACTGATACGATTCGCCCCATCGCCGCACTGATGCGGCGCAACATTTCAGAA TACGCGAAAGGACGAGCGCG
Downstream 100 bases:
>100_bases GGTCCCTAACCCGTCGATTTTTAAAGGAAAGTACGAAAATGTCCGATTCAGGTGTGTTATCTCCCCGTAAGGTTAAGCGG TCGTTGGTGAGAAGAATCGG
Product: ubiquinone/menaquinone biosynthesis methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSKTHFGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGYKVLDIAGGTGDLSKAFAKQA GETGEVWHTDINESMLRVGRDRLLDKGVITPALLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLL VLEFSKVWDPLKKVYDVYSFKVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAGVVALHVG TKY
Sequences:
>Translated_243_residues MSKTHFGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGYKVLDIAGGTGDLSKAFAKQA GETGEVWHTDINESMLRVGRDRLLDKGVITPALLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLL VLEFSKVWDPLKKVYDVYSFKVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAGVVALHVG TKY >Mature_242_residues SKTHFGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGYKVLDIAGGTGDLSKAFAKQAG ETGEVWHTDINESMLRVGRDRLLDKGVITPALLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLLV LEFSKVWDPLKKVYDVYSFKVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAGVVALHVGT KY
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: COG2226
COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI116063536, Length=277, Percent_Identity=44.7653429602888, Blast_Score=223, Evalue=1e-58, Organism=Escherichia coli, GI48994983, Length=243, Percent_Identity=62.1399176954732, Blast_Score=304, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17557039, Length=244, Percent_Identity=46.3114754098361, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6323526, Length=256, Percent_Identity=40.625, Blast_Score=162, Evalue=6e-41, Organism=Drosophila melanogaster, GI24641702, Length=255, Percent_Identity=45.8823529411765, Blast_Score=217, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 27151; Mature: 27019
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS01183 UBIE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTHFGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCC KVLDIAGGTGDLSKAFAKQAGETGEVWHTDINESMLRVGRDRLLDKGVITPALLCDAEKI EEEEECCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC PFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLLVLEFSKVWDPLKKVYDVYSF CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH KVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAGVVALHVG HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEECC TKY CCC >Mature Secondary Structure SKTHFGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCC KVLDIAGGTGDLSKAFAKQAGETGEVWHTDINESMLRVGRDRLLDKGVITPALLCDAEKI EEEEECCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC PFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLLVLEFSKVWDPLKKVYDVYSF CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH KVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAGVVALHVG HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEECC TKY CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA