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The map label for this gene is yvoA [H]

Identifier: 91781762

GI number: 91781762

Start: 418683

End: 419435

Strand: Direct

Name: yvoA [H]

Synonym: Bxe_A4083

Alternate gene names: 91781762

Gene position: 418683-419435 (Clockwise)

Preceding gene: 91781761

Following gene: 91781763

Centisome position: 8.55

GC content: 64.14

Gene sequence:

>753_bases
ATGGCCACGACAGTCCTCGGGCAACAGCCGCGCTACATGCAACTGGCACAAACGCTCCTCAACGAGATTCAGGGTGGGCA
GTTTCCCATCGGCACGTTGCTGCCGACCGAGTTCGAGTTATGCGAGCAGTTCGGCGCGAGCCGCTTCACCGTGCGCCAGG
CGATCAAGCAGCTGGAGCAGCGCGGCCTGGTGGACCGGCGGCCCGGCATCGGCACCCGCGTGAAGGCCACGCAGAGCGAG
ACTGCGTACCGTCAGGTGATGGAGCGCCTGAGCGATCTGCACCGTTACACGTCCGACACGGAGCTGGAAATCGCCTCGAC
GCAGACCGTCGAGATCGATGACCCGGATCTGATCGAGCGGCTCGGCGCAAAGCCGGGCGAAACCTGGCTGCTGGCCGAGG
GCATTCGTCTCTCGCCGGAGAGTGTCGAACCGATCTGCCACACCGAGGTGTATATCCACCCGGCGTTCCGTTCGTTGGCG
GGTTTGAGCGGCCGGACGCACGTGCCGATCTACACGCTGATCGAAAAGCAGTTCGGCGAGCAGATCACCGAAGTGCAGCA
GGAAATCCGCGCGGTCGCGCTGCCGGCGGCGCTGGCGCAACGTCTGAACGCAAAGCCGCGTTCGCCGGCGCTGTGGTTGT
GCCGCCGTTATCTGAACCGGCGGGGGCAGGTGGTCGAACTGACGATCAGCGTGCATCCGGCGGATCGCTATAGTTATTCC
GAAACGTTTCAACGCGACTGGCACGCGAACTAG

Upstream 100 bases:

>100_bases
GGCTACGGTGCGGAAAGGATCGCTTTGCTGAGAGAGGCGGGTGTGGTGCAATAAGGCCGGGCGGGCAACCGTCCGCTCTT
CCACTTTTTTGCACACCAAG

Downstream 100 bases:

>100_bases
CAATCTTGCGCCGCGTGCCGTTCAGGAGAACAACATGGACGCACGCAGTTATCTGTTCGTGCCGGGCGACCGCCCCGAGC
GCTTTGCCAAGGCGCTCGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MATTVLGQQPRYMQLAQTLLNEIQGGQFPIGTLLPTEFELCEQFGASRFTVRQAIKQLEQRGLVDRRPGIGTRVKATQSE
TAYRQVMERLSDLHRYTSDTELEIASTQTVEIDDPDLIERLGAKPGETWLLAEGIRLSPESVEPICHTEVYIHPAFRSLA
GLSGRTHVPIYTLIEKQFGEQITEVQQEIRAVALPAALAQRLNAKPRSPALWLCRRYLNRRGQVVELTISVHPADRYSYS
ETFQRDWHAN

Sequences:

>Translated_250_residues
MATTVLGQQPRYMQLAQTLLNEIQGGQFPIGTLLPTEFELCEQFGASRFTVRQAIKQLEQRGLVDRRPGIGTRVKATQSE
TAYRQVMERLSDLHRYTSDTELEIASTQTVEIDDPDLIERLGAKPGETWLLAEGIRLSPESVEPICHTEVYIHPAFRSLA
GLSGRTHVPIYTLIEKQFGEQITEVQQEIRAVALPAALAQRLNAKPRSPALWLCRRYLNRRGQVVELTISVHPADRYSYS
ETFQRDWHAN
>Mature_249_residues
ATTVLGQQPRYMQLAQTLLNEIQGGQFPIGTLLPTEFELCEQFGASRFTVRQAIKQLEQRGLVDRRPGIGTRVKATQSET
AYRQVMERLSDLHRYTSDTELEIASTQTVEIDDPDLIERLGAKPGETWLLAEGIRLSPESVEPICHTEVYIHPAFRSLAG
LSGRTHVPIYTLIEKQFGEQITEVQQEIRAVALPAALAQRLNAKPRSPALWLCRRYLNRRGQVVELTISVHPADRYSYSE
TFQRDWHAN

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786950, Length=244, Percent_Identity=27.4590163934426, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI48994961, Length=60, Percent_Identity=53.3333333333333, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28384; Mature: 28252

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTVLGQQPRYMQLAQTLLNEIQGGQFPIGTLLPTEFELCEQFGASRFTVRQAIKQLEQ
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
RGLVDRRPGIGTRVKATQSETAYRQVMERLSDLHRYTSDTELEIASTQTVEIDDPDLIER
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCHHHHHH
LGAKPGETWLLAEGIRLSPESVEPICHTEVYIHPAFRSLAGLSGRTHVPIYTLIEKQFGE
HCCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHH
QITEVQQEIRAVALPAALAQRLNAKPRSPALWLCRRYLNRRGQVVELTISVHPADRYSYS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHH
ETFQRDWHAN
HHHHHHCCCC
>Mature Secondary Structure 
ATTVLGQQPRYMQLAQTLLNEIQGGQFPIGTLLPTEFELCEQFGASRFTVRQAIKQLEQ
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
RGLVDRRPGIGTRVKATQSETAYRQVMERLSDLHRYTSDTELEIASTQTVEIDDPDLIER
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCHHHHHH
LGAKPGETWLLAEGIRLSPESVEPICHTEVYIHPAFRSLAGLSGRTHVPIYTLIEKQFGE
HCCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHH
QITEVQQEIRAVALPAALAQRLNAKPRSPALWLCRRYLNRRGQVVELTISVHPADRYSYS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHH
ETFQRDWHAN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]