| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yxeQ [H]
Identifier: 91781743
GI number: 91781743
Start: 395996
End: 397381
Strand: Reverse
Name: yxeQ [H]
Synonym: Bxe_A4102
Alternate gene names: 91781743
Gene position: 397381-395996 (Counterclockwise)
Preceding gene: 91781744
Following gene: 91781741
Centisome position: 8.12
GC content: 66.96
Gene sequence:
>1386_bases ATGAGCGTTGAAAAACCAGAAGGACCCGGCGTCATTGCCGAAAAACTGGGCGCCTGGATCGCCGATGTGCATGCGTCTGC ATTGCCGGACCGGACGGTCGAAATCGCCCGTCTGCTGCTGCTCGACGTAACCGGCTTGTGCATTGCCGGGCGCGGCGAAT CCTATGTCCGGGCGACGCTGCAGGCCACCGATCCGGGCGGCGCGTGCACGGCGCTCGGCCACGCGGGCAGCTTCAGCGCG TTCGATGCGGCGCTGATCAACGGCACCGCCGCGCACGGCGAAGACTATGACGACACCTTTGAAGGCGGCCCGGTGCATTC GGGTGCCGTGGTCGTGCCCGCGGTGCTCGCGGCCTGCGAACGCGAAGGCCTCGGTGGCGAAGCATTGCTACGCGGCATCG CCGTCGGCGCGGAGTTGATGTGCCGGCTGAGTCTCGTCGCACCGCGCGCAATTCATAGCGCCGGTTTCCATCCGACCGCC GTGATCGGCGCACTTGCGGCAGCCGGCGGCGTCGCGGCCGCGCTGCGCCTGGAGGCACGGCAAACCACGTCGGCGCTCGG TATTGCGGGCAGCATGGCGGCGGGGATCATCGAGTATCTGGCCGAAGGCACGTCGACCAAACGCATGCATGCCGGCTGGG CCGCCCAGTCGGGCATTCGCGCGGCGCTGATGGCGCGCGGCGGCTTCGACGGCCCGCGCACCGTGCTCGAAGGCAAGCAC GGTTTCTTCAAGGCGTTCGCGCCGTCTCGCGCGCCGGATTTTTCGCCGGTGCTCGAGACGCTCGGCGAGTCGTGGATCAT GGAAACGATCGCGTTCAAGCCCTATGCGTGCGGGACCATGACCCAGCCGTATATCGATTGCGCCATCGCACTCGCGGAGC GCGGCGTGCAGGCGGAGCAGATTCGCGACATCGTGTGCGAAGTCGGCGAAGGCACGGTGCATCGTCTATGGGAAGAACTC GCCGTCAAGCATCGGCCGCCGACCGCTTATGCCGCGAAATTCAGCACACCGTTCTGCATGGCCGTGGGTTTCTTCGATCG CAAAGCGGGCTTCGGTCAATTCACCGAAGCCCGGATTCACGATCCCGCGGTGCTCGCGCTGGCCGGCAAGATCCGCTACG TGATCGACCCGGATAACGAGTATCCGGACAATTTCACCGGCCATCTGCGCGCCACGCTCAACGACGGCACCGTGCAGGAA GTGCGTCAGCCGCATATGCGCGGCGGTGCGCGCGAGCCGCTGACGGGCGCCGAACTCGCGCAAAAATTCGTCGACAACGC GCAGCACGGCGGCTGGAACGCCGCGCTCGCCGACGAGGCGCGCGGATGGTGCGAAACCGTGTTCGGCGAGCCGGCCCTCG GCACGATCGCACGGTTCCGGCAATAG
Upstream 100 bases:
>100_bases GCCGACGGTTCGCGCTAGCAACGCTAGCAAGCCCCACGCTTTGCAAACGCGCAGCACAGCGGCGCACGCATTTCAATACC GACTCGGAGCGGTCACCCAT
Downstream 100 bases:
>100_bases CCGATCAGTCCTGCAAGCCGCGCACGTTCCGATAGGAACAGCGGCTCGAATCGACAAGGCGCACGCGAAATTCGACCGGC TGGTCCTTGAACGTGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSVEKPEGPGVIAEKLGAWIADVHASALPDRTVEIARLLLLDVTGLCIAGRGESYVRATLQATDPGGACTALGHAGSFSA FDAALINGTAAHGEDYDDTFEGGPVHSGAVVVPAVLAACEREGLGGEALLRGIAVGAELMCRLSLVAPRAIHSAGFHPTA VIGALAAAGGVAAALRLEARQTTSALGIAGSMAAGIIEYLAEGTSTKRMHAGWAAQSGIRAALMARGGFDGPRTVLEGKH GFFKAFAPSRAPDFSPVLETLGESWIMETIAFKPYACGTMTQPYIDCAIALAERGVQAEQIRDIVCEVGEGTVHRLWEEL AVKHRPPTAYAAKFSTPFCMAVGFFDRKAGFGQFTEARIHDPAVLALAGKIRYVIDPDNEYPDNFTGHLRATLNDGTVQE VRQPHMRGGAREPLTGAELAQKFVDNAQHGGWNAALADEARGWCETVFGEPALGTIARFRQ
Sequences:
>Translated_461_residues MSVEKPEGPGVIAEKLGAWIADVHASALPDRTVEIARLLLLDVTGLCIAGRGESYVRATLQATDPGGACTALGHAGSFSA FDAALINGTAAHGEDYDDTFEGGPVHSGAVVVPAVLAACEREGLGGEALLRGIAVGAELMCRLSLVAPRAIHSAGFHPTA VIGALAAAGGVAAALRLEARQTTSALGIAGSMAAGIIEYLAEGTSTKRMHAGWAAQSGIRAALMARGGFDGPRTVLEGKH GFFKAFAPSRAPDFSPVLETLGESWIMETIAFKPYACGTMTQPYIDCAIALAERGVQAEQIRDIVCEVGEGTVHRLWEEL AVKHRPPTAYAAKFSTPFCMAVGFFDRKAGFGQFTEARIHDPAVLALAGKIRYVIDPDNEYPDNFTGHLRATLNDGTVQE VRQPHMRGGAREPLTGAELAQKFVDNAQHGGWNAALADEARGWCETVFGEPALGTIARFRQ >Mature_460_residues SVEKPEGPGVIAEKLGAWIADVHASALPDRTVEIARLLLLDVTGLCIAGRGESYVRATLQATDPGGACTALGHAGSFSAF DAALINGTAAHGEDYDDTFEGGPVHSGAVVVPAVLAACEREGLGGEALLRGIAVGAELMCRLSLVAPRAIHSAGFHPTAV IGALAAAGGVAAALRLEARQTTSALGIAGSMAAGIIEYLAEGTSTKRMHAGWAAQSGIRAALMARGGFDGPRTVLEGKHG FFKAFAPSRAPDFSPVLETLGESWIMETIAFKPYACGTMTQPYIDCAIALAERGVQAEQIRDIVCEVGEGTVHRLWEELA VKHRPPTAYAAKFSTPFCMAVGFFDRKAGFGQFTEARIHDPAVLALAGKIRYVIDPDNEYPDNFTGHLRATLNDGTVQEV RQPHMRGGAREPLTGAELAQKFVDNAQHGGWNAALADEARGWCETVFGEPALGTIARFRQ
Specific function: Unknown
COG id: COG2079
COG function: function code R; Uncharacterized protein involved in propionate catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpD family [H]
Homologues:
Organism=Homo sapiens, GI310129732, Length=434, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI310110533, Length=434, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI310123058, Length=417, Percent_Identity=28.537170263789, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005656 [H]
Pfam domain/function: PF03972 MmgE_PrpD [H]
EC number: NA
Molecular weight: Translated: 48471; Mature: 48339
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEKPEGPGVIAEKLGAWIADVHASALPDRTVEIARLLLLDVTGLCIAGRGESYVRATL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCEEEEEE QATDPGGACTALGHAGSFSAFDAALINGTAAHGEDYDDTFEGGPVHSGAVVVPAVLAACE EECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH REGLGGEALLRGIAVGAELMCRLSLVAPRAIHSAGFHPTAVIGALAAAGGVAAALRLEAR HCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QTTSALGIAGSMAAGIIEYLAEGTSTKRMHAGWAAQSGIRAALMARGGFDGPRTVLEGKH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHCHHHHHHHCCCCCCCHHHHCCCC GFFKAFAPSRAPDFSPVLETLGESWIMETIAFKPYACGTMTQPYIDCAIALAERGVQAEQ CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHH IRDIVCEVGEGTVHRLWEELAVKHRPPTAYAAKFSTPFCMAVGFFDRKAGFGQFTEARIH HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCC DPAVLALAGKIRYVIDPDNEYPDNFTGHLRATLNDGTVQEVRQPHMRGGAREPLTGAELA CCEEEEEECCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHH QKFVDNAQHGGWNAALADEARGWCETVFGEPALGTIARFRQ HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure SVEKPEGPGVIAEKLGAWIADVHASALPDRTVEIARLLLLDVTGLCIAGRGESYVRATL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCEEEEEE QATDPGGACTALGHAGSFSAFDAALINGTAAHGEDYDDTFEGGPVHSGAVVVPAVLAACE EECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH REGLGGEALLRGIAVGAELMCRLSLVAPRAIHSAGFHPTAVIGALAAAGGVAAALRLEAR HCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QTTSALGIAGSMAAGIIEYLAEGTSTKRMHAGWAAQSGIRAALMARGGFDGPRTVLEGKH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHCHHHHHHHCCCCCCCHHHHCCCC GFFKAFAPSRAPDFSPVLETLGESWIMETIAFKPYACGTMTQPYIDCAIALAERGVQAEQ CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHH IRDIVCEVGEGTVHRLWEELAVKHRPPTAYAAKFSTPFCMAVGFFDRKAGFGQFTEARIH HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCC DPAVLALAGKIRYVIDPDNEYPDNFTGHLRATLNDGTVQEVRQPHMRGGAREPLTGAELA CCEEEEEECCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHH QKFVDNAQHGGWNAALADEARGWCETVFGEPALGTIARFRQ HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]