| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fdx [H]
Identifier: 91781709
GI number: 91781709
Start: 360188
End: 360445
Strand: Direct
Name: fdx [H]
Synonym: Bxe_A4137
Alternate gene names: 91781709
Gene position: 360188-360445 (Clockwise)
Preceding gene: 91781708
Following gene: 91781717
Centisome position: 7.36
GC content: 59.3
Gene sequence:
>258_bases ATGGCCTTGATGATTACCGACGAGTGCATCAATTGCGACGTCTGCGAGCCCGAGTGCCCGAACGACGCGATTTCGATGGG CCCGGAAATCTATGTGATCGACCCGAAGAAGTGTACCGAGTGCGTCGGGCATTTCGACGAGCCGCAATGTATTCAGGTGT GCCCGGTCGAGTGTATCCCGCGCGATCCGGAGCATCTGGAGACGCCCGGCGAGTTGATGGCGAAGTACCACGCGCTACAG GCTGCAAAGGGCGAGTGA
Upstream 100 bases:
>100_bases GGATCCGGCCAACGGTGCTTCGGCGGCGCAACCGTAACCGGCGTAAACTGTCGGTTTGACGGATCAAAGTCGGCTGCGGC CGGCGTGAAGTGAGAGAAGC
Downstream 100 bases:
>100_bases AGTTCGAAGTCTAAAAAAACGGCGAGACCTTTCGGCCTCGCCGTTTTTTTTTGCCGCAACGTTTCTGCGCTGTTCGTCGT GTTAACCGACGTAAGCGCTG
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQ AAKGE
Sequences:
>Translated_85_residues MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQ AAKGE >Mature_84_residues ALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIPRDPEHLETPGELMAKYHALQA AKGE
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=83, Percent_Identity=56.6265060240964, Blast_Score=97, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9408; Mature: 9277
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 15.3 %Cys+Met (Translated Protein) 10.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIP CEEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCC RDPEHLETPGELMAKYHALQAAKGE CCHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ALMITDECINCDVCEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVECIP EEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCC RDPEHLETPGELMAKYHALQAAKGE CCHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8765743; 893371; 8880900 [H]