| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ctaA [H]
Identifier: 91781683
GI number: 91781683
Start: 332172
End: 333281
Strand: Direct
Name: ctaA [H]
Synonym: Bxe_A4163
Alternate gene names: 91781683
Gene position: 332172-333281 (Clockwise)
Preceding gene: 91781682
Following gene: 91781684
Centisome position: 6.78
GC content: 64.86
Gene sequence:
>1110_bases ATGTTCGTACTGCAACTGGCTTTGATCGGCTTGTGTATCGCGTTGTTGCCGCTGTCCTACGTGTGGGTCAAGGCCGACGA CAACAAATTCCGCAAGCTGGTCTGGCTCACCACCTTCCTCACGCTCGATCTGGTGATGTTCGGCGGCTTCACGCGGCTCA CCGATTCGGGGCTCGGCTGTCCGGACTGGCCGGGCTGTTACGGCACGTCGTCGCCGTTCATCGCGCATGCGGCGATCACG GCCGCGCATCAGGCAATGCCCACCGGGCCCGTCAGCATGACGAAGGCGTGGATCGAAATGATCCACCGCTACTTCGCGAT GGCGATCGGCGTGCTGATCATCGCGCAGACCATCATTGCCTGGACGGCGCGCGTCAAACGGCGTCCGTTGCACGTGTCGC CGTGGTGGCCGACCTCGTTGCTGCTGCTGATTCTGGTGCAAGGCGCGTTCGGCGCCTGGACCGTGACGATGAAGCTGCAA CCGGTCATCGTGACGACGCACTTGCTGCTCGGCCTCGCGCTGCTGGGCACGCTCGGCTGGTTGGCCGCGCGGCAGACGCC GTTGCCTGCTTACGAGCCCGAAGCCGCGCGCTGGCGCGCAGCCGCGCTCGCGGGTCTGGTGCTGCTGATTGCGCAAATTG CGCTGGGCGGCTGGGTCAGCACGAACTACGCAGTGCTCGCATGCACCGATTTCCCGACCTGCAACGGCCAATGGGTTCCG CCGATGGACTTCGCGCACGGCTTCCACCTGTGGCGCGCGCTCGGCATGACCGGCGACGGCGACGTGATTACCCAGGACGC GCTGGTGGCGATTCACTGGACGCACCGCACGTTCGCTATCGTCGTGGTCGCTTATCTGGTGTGGCTGACGCTGAAGCTGC GCCGCTTCGAGTCGCTGCGGCGGCCGGCCAACGGCGTGCTGCTGGTGGTGCTGATCCAGTTCATCACAGGGCTGTCGAAC ATCGTTCTGCAATGGCCGTTGCCCATTGCGGTGGCGCATAACGGTGGGGCCGCGATCCTGCTGCTTCTGCTCGTTATGTT AAACTTTCGGATCGCTTATAGCCGTCCCGGCCGCGCCGTGTTCCCAGCGCGCGATGCCGCGCCAGCGTGA
Upstream 100 bases:
>100_bases CGATTCCCGAAAGATCCGAACCCCAGCAAGATCAAGGGCGACGTGACCAAGCTGCTCAAATGGTCGAGTATCGGCTGATG CCGCAACCTGGGTAAAAGAG
Downstream 100 bases:
>100_bases CTCCACATGGACAGCACAACACTTTCCCAAACGCCCGGTAGCCGGGTCTCCCAGTACATCGCCCTGACGAAGCCGCGCGT CACGCAACTCGCCGTGTTCT
Product: putative cytochrome oxidase assembly protein
Products: NA
Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MFVLQLALIGLCIALLPLSYVWVKADDNKFRKLVWLTTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTIIAWTARVKRRPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ PVIVTTHLLLGLALLGTLGWLAARQTPLPAYEPEAARWRAAALAGLVLLIAQIALGGWVSTNYAVLACTDFPTCNGQWVP PMDFAHGFHLWRALGMTGDGDVITQDALVAIHWTHRTFAIVVVAYLVWLTLKLRRFESLRRPANGVLLVVLIQFITGLSN IVLQWPLPIAVAHNGGAAILLLLLVMLNFRIAYSRPGRAVFPARDAAPA
Sequences:
>Translated_369_residues MFVLQLALIGLCIALLPLSYVWVKADDNKFRKLVWLTTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTIIAWTARVKRRPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ PVIVTTHLLLGLALLGTLGWLAARQTPLPAYEPEAARWRAAALAGLVLLIAQIALGGWVSTNYAVLACTDFPTCNGQWVP PMDFAHGFHLWRALGMTGDGDVITQDALVAIHWTHRTFAIVVVAYLVWLTLKLRRFESLRRPANGVLLVVLIQFITGLSN IVLQWPLPIAVAHNGGAAILLLLLVMLNFRIAYSRPGRAVFPARDAAPA >Mature_369_residues MFVLQLALIGLCIALLPLSYVWVKADDNKFRKLVWLTTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTIIAWTARVKRRPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ PVIVTTHLLLGLALLGTLGWLAARQTPLPAYEPEAARWRAAALAGLVLLIAQIALGGWVSTNYAVLACTDFPTCNGQWVP PMDFAHGFHLWRALGMTGDGDVITQDALVAIHWTHRTFAIVVVAYLVWLTLKLRRFESLRRPANGVLLVVLIQFITGLSN IVLQWPLPIAVAHNGGAAILLLLLVMLNFRIAYSRPGRAVFPARDAAPA
Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]
COG id: COG1612
COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003780 [H]
Pfam domain/function: PF02628 COX15-CtaA [H]
EC number: NA
Molecular weight: Translated: 40466; Mature: 40466
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLQLALIGLCIALLPLSYVWVKADDNKFRKLVWLTTFLTLDLVMFGGFTRLTDSGLGC CHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC PDWPGCYGTSSPFIAHAAITAAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTIIA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTARVKRRPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQPVIVTTHLLLGLALLGTLGW HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH LAARQTPLPAYEPEAARWRAAALAGLVLLIAQIALGGWVSTNYAVLACTDFPTCNGQWVP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCC PMDFAHGFHLWRALGMTGDGDVITQDALVAIHWTHRTFAIVVVAYLVWLTLKLRRFESLR CHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH RPANGVLLVVLIQFITGLSNIVLQWPLPIAVAHNGGAAILLLLLVMLNFRIAYSRPGRAV CCCCCHHHHHHHHHHHCHHHEEEECCCCEEEECCCCHHHHHHHHHHHCCEEEECCCCCEE FPARDAAPA CCCCCCCCC >Mature Secondary Structure MFVLQLALIGLCIALLPLSYVWVKADDNKFRKLVWLTTFLTLDLVMFGGFTRLTDSGLGC CHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC PDWPGCYGTSSPFIAHAAITAAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTIIA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTARVKRRPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQPVIVTTHLLLGLALLGTLGW HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH LAARQTPLPAYEPEAARWRAAALAGLVLLIAQIALGGWVSTNYAVLACTDFPTCNGQWVP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCC PMDFAHGFHLWRALGMTGDGDVITQDALVAIHWTHRTFAIVVVAYLVWLTLKLRRFESLR CHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH RPANGVLLVVLIQFITGLSNIVLQWPLPIAVAHNGGAAILLLLLVMLNFRIAYSRPGRAV CCCCCHHHHHHHHHHHCHHHEEEECCCCEEEECCCCHHHHHHHHHHHCCEEEECCCCCEE FPARDAAPA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA