| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781640
Identifier: 91781640
GI number: 91781640
Start: 288777
End: 289460
Strand: Reverse
Name: 91781640
Synonym: Bxe_A4206
Alternate gene names: NA
Gene position: 289460-288777 (Counterclockwise)
Preceding gene: 91781642
Following gene: 91781636
Centisome position: 5.91
GC content: 64.62
Gene sequence:
>684_bases ATGAGCCGCAACCTTGCGCTGTTCGACCTGGACCACACGCTGCTGCCGCTCGACAGCGATCAGGCGTGGGCCCACTTCAT TGCCGGACTGGGCGTGGAAGGCGCCGTGCGGCACGCGCAGGAAATCGACGATTACTACCGGCAGTATGTGGCCGGCACGC TCGATATGGCCGCCTATCTGAACTATACGCTGGCGCCGCTCGCCCGCCACTCACGCGAGCAACTCAACGCGTGGCACGCG CAGTTCATGCAGCAGGTGATTGCGCCGGCCATCCTGCCTGCCGCGCGCGAACTCGTGCAACGCCATCTGGACGCGGGCGA TCTTTGCTGCATCGTCACCGCCACCAATGTGTTCATCACGGAGCCGATCGGCAAGGCGCTCGGTTTCGAGCATCTGCTGG GAATCGAGCTCGGCACCGAAGGCGGCGATCCATCGGCGCGCTTCACGGGCACCGCTGTCGGCACCCCCACCTTCCGCGAA GGCAAGATCACGCGCACCGAGAGTTGGCTGGCTTCGCTCGGGCATCGGCTGCAGGATTTCCACGAGAGCTGGTTCTATAG CGATTCGATCAACGACGTCCCCTTGCTGGAGCGCGTCACCCATCCGGTCGCGACCAATCCCGATCCGCGTTTGCGTGCCG TCGCTTCGGAACGCGGCTGGCCGGTGATCGAGCTGTTTGCCTGA
Upstream 100 bases:
>100_bases TAAATATACGCTCGTGCAAAACTGTGGATTGCTGTGTGCCGGCTCATGGCCAGTCATGCATGGCGTTCGACCACACCCCC CTTAAACACGAGGACTCTGG
Downstream 100 bases:
>100_bases GCTTGCCTGGACCTGGACCTGGGCTTGCGCCTGGCGCTGAGCGGCAGCCGCCGCGCTACACGCGCCCTTTCCACGGCACG AGGCGGCGCTCCAGCGCGCG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSRNLALFDLDHTLLPLDSDQAWAHFIAGLGVEGAVRHAQEIDDYYRQYVAGTLDMAAYLNYTLAPLARHSREQLNAWHA QFMQQVIAPAILPAARELVQRHLDAGDLCCIVTATNVFITEPIGKALGFEHLLGIELGTEGGDPSARFTGTAVGTPTFRE GKITRTESWLASLGHRLQDFHESWFYSDSINDVPLLERVTHPVATNPDPRLRAVASERGWPVIELFA
Sequences:
>Translated_227_residues MSRNLALFDLDHTLLPLDSDQAWAHFIAGLGVEGAVRHAQEIDDYYRQYVAGTLDMAAYLNYTLAPLARHSREQLNAWHA QFMQQVIAPAILPAARELVQRHLDAGDLCCIVTATNVFITEPIGKALGFEHLLGIELGTEGGDPSARFTGTAVGTPTFRE GKITRTESWLASLGHRLQDFHESWFYSDSINDVPLLERVTHPVATNPDPRLRAVASERGWPVIELFA >Mature_226_residues SRNLALFDLDHTLLPLDSDQAWAHFIAGLGVEGAVRHAQEIDDYYRQYVAGTLDMAAYLNYTLAPLARHSREQLNAWHAQ FMQQVIAPAILPAARELVQRHLDAGDLCCIVTATNVFITEPIGKALGFEHLLGIELGTEGGDPSARFTGTAVGTPTFREG KITRTESWLASLGHRLQDFHESWFYSDSINDVPLLERVTHPVATNPDPRLRAVASERGWPVIELFA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25201; Mature: 25070
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNLALFDLDHTLLPLDSDQAWAHFIAGLGVEGAVRHAQEIDDYYRQYVAGTLDMAAYL CCCCEEEEECCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYTLAPLARHSREQLNAWHAQFMQQVIAPAILPAARELVQRHLDAGDLCCIVTATNVFIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEE EPIGKALGFEHLLGIELGTEGGDPSARFTGTAVGTPTFREGKITRTESWLASLGHRLQDF CCHHHHHCHHHHHEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH HESWFYSDSINDVPLLERVTHPVATNPDPRLRAVASERGWPVIELFA HHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECC >Mature Secondary Structure SRNLALFDLDHTLLPLDSDQAWAHFIAGLGVEGAVRHAQEIDDYYRQYVAGTLDMAAYL CCCEEEEECCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYTLAPLARHSREQLNAWHAQFMQQVIAPAILPAARELVQRHLDAGDLCCIVTATNVFIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEE EPIGKALGFEHLLGIELGTEGGDPSARFTGTAVGTPTFREGKITRTESWLASLGHRLQDF CCHHHHHCHHHHHEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH HESWFYSDSINDVPLLERVTHPVATNPDPRLRAVASERGWPVIELFA HHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]