| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tauC [H]
Identifier: 91781639
GI number: 91781639
Start: 287852
End: 288721
Strand: Direct
Name: tauC [H]
Synonym: Bxe_A4207
Alternate gene names: 91781639
Gene position: 287852-288721 (Clockwise)
Preceding gene: 91781638
Following gene: 91781641
Centisome position: 5.88
GC content: 66.67
Gene sequence:
>870_bases GTGACGGCTTCGCGTGAATCATTGGGCAATGTGCCGCTCGCCGAAACCGGCAAGCGGCCGCAACGGACCGCGCGTCCCGT ACGCGGCTGGCGTTTGCCCGGCGAAGGGCCGACCGCGGCACTCAGCGCGGCGTCGGTCACGACGCTCGCGGCGTTGTGGT GGCTTGCCACGCATCTGCACTGGTTGCCGCCGCTATTTCTGCCGACGCCCGAAGCCGTATGGGCCGCGTTCATCGATGCG TGGCATGGCCGCATTCAAGGTGGCTTGCCGCTCTCCGAGCATCTCGCCTGGAGTGCGTTGCGTGTGTTCGGTGCGTTTGC GCTGGCCGCGGTCACGGCCGTGCCGGTCGGTATTCTGATGGGCGTGAGCCGGGTCGCGCGCGGCCTGCTCGATCCACCTC TGGAGTTCTACCGGCCGCTGCCGCCGCTCGCTTATCTGCCGCTGGTGGTGATCTGGTTCGGCATCGACGAAACGGCGAAG ATCGTCGTGATCTATCTCGCCTGCTTTGCGCCGATTGCGATGGCCGCGCGCGCCGGCGTGCGCAGCGCAACCATCGAGCA GATTCATGCGGCGTATTCACTGGGCGGCAGCTTCTCGCAGATCGTGCGGCACGTGGTCTTGCCGGCGGCGCTGCCGGAGA TTCTGACCGGCCTGCGTATCGCGATCGGTTTCGGCTGGACCACGCTGGTTGCCGCCGAAATGGTCGCGGCCACTGCGGGG TTGGGTCAGATGGTGCTGAACGCGTCGAGCTTTCTGCGCACCGACGTGGTGGTGATGGGCATTGTGCTGATCGGGCTGAT CGCTTGGTTCTTCGATCTGGGTATGCGCGCGCTGGAGCGCCGCCTCGTGCCGTGGAAAGGGCGCGTGTAG
Upstream 100 bases:
>100_bases CGCGCGATGCACGGGCGGTCAAGTCGTCGGCGGATTTCATCGAATGGCGCGAGCGGCTGGTGCGCCGCCTGCATGAGCGC AATCAGGAAGAGGTGGTGTC
Downstream 100 bases:
>100_bases CGCGGCGGCTGCCGCTCAGCGCCAGGCGCAAGCCCAGGTCCAGGTCCAGGCAAGCTCAGGCAAACAGCTCGATCACCGGC CAGCCGCGTTCCGAAGCGAC
Product: ABC taurine transporter, inner membrane subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTASRESLGNVPLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWWLATHLHWLPPLFLPTPEAVWAAFIDA WHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAK IVVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAG LGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGRV
Sequences:
>Translated_289_residues MTASRESLGNVPLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWWLATHLHWLPPLFLPTPEAVWAAFIDA WHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAK IVVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAG LGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGRV >Mature_288_residues TASRESLGNVPLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWWLATHLHWLPPLFLPTPEAVWAAFIDAW HGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKI VVIYLACFAPIAMAARAGVRSATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGL GQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGRV
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=260, Percent_Identity=51.9230769230769, Blast_Score=230, Evalue=9e-62, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=38.2352941176471, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1789033, Length=170, Percent_Identity=30.5882352941176, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31059; Mature: 30928
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASRESLGNVPLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWWLATHLH CCCCHHHHCCCCCHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLPPLFLPTPEAVWAAFIDAWHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILM HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIYLACFAPIAMAARAGV HHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC RSATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TASRESLGNVPLAETGKRPQRTARPVRGWRLPGEGPTAALSAASVTTLAALWWLATHLH CCCHHHHCCCCCHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLPPLFLPTPEAVWAAFIDAWHGRIQGGLPLSEHLAWSALRVFGAFALAAVTAVPVGILM HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIYLACFAPIAMAARAGV HHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC RSATIEQIHAAYSLGGSFSQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGQMVLNASSFLRTDVVVMGIVLIGLIAWFFDLGMRALERRLVPWKGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]