| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yjbB [H]
Identifier: 91781641
GI number: 91781641
Start: 289649
End: 291346
Strand: Direct
Name: yjbB [H]
Synonym: Bxe_A4205
Alternate gene names: 91781641
Gene position: 289649-291346 (Clockwise)
Preceding gene: 91781639
Following gene: 91781643
Centisome position: 5.92
GC content: 64.13
Gene sequence:
>1698_bases ATGGCAGCAGGAACGGATGCGCAGTGCCCTATGTTGATTCTCCTAAACCTTCTGGCCGGTGTGGCGCTCCTCGTGTGGGG TTCACACATTGTGCGCACCGGCATCCTGCGGGTTCTCGGCGCCGATCTGCGCAGCGTGCTGGGGCGCAGCACCAGTAGCC GCTGGCGGGCGTTCCTCTCGGGTGTCGGCGTCACGAGTCTGGTACAGAGCAGCAATGCCACCGCGGTCATCGTCACGTCG TTCGCGGCGCAAGGACTTTTACCGCTCGCCAGCGGTCTCGCGATCATGCTCGGCGCCGACGTCGGCACCGCATTGATGGC GCGGGTTCTCACACTCGATCTGTCCTGGTTGTCGCCGATCCTGATTCTGCTCGGCGTGCCGCTCTTTTTGTCGCGCAAGC AAACCCGTCTCGGCCAGGCCGGCCGCACGCTGATCGGCCTCGGGCTGATCCTGCTGGCGCTGCGTCTGATCGTCGAAGCC GCCCAGCCCATGATGCAAGGCGCCGGCGTGCGCGTCATGTTCGGTGCACTGACCGGCGACACCATGCTCGACGCGCTGGT CGGCGCCGCGTTCGCCATGCTGTCCTATTCAAGCCTTGCCGCCGTGCTGCTGACCGCGACGCTTGCCTCATCCGGTGTGA TTTCGCTGAAGGTGGCGCTGTGCCTCGTGATCGGCGCGAATCTGGGCAGCGGCCTGCTGGCGCTCCTCGGCACCGTCGCA CAGAACGCGGCGGCGCGGCGGCTCGCGTTGGGCAGTTTTGCGTTCAAGCTGGCGGGCGCGTTGCTGATCCTGCCGTTCAC TTCGCTGCTCGCGCGCGGACTGCCGGTATTGATCGCGAATCCGCGTGAAGCAACCGTTGGATTTCACCTGATCTATAACG CGCTGCGTTGCTGCGCGTGCCTGTCGCTGATCGATCCGGTGGCGCGCATCTGTGTGCGCATTCTGCCCAACCGGCCGGTG CCGAACGGCGAGCTACGGCCGCTCCACCTGGACACCGCCGCGCTGTCCACACCCACGCTCGCGCTCGCGCATGCCGCGCG CGAGGTGCTGCGGATCGGCGACATCGTGCGCACCATGCTCGACAATGTCGCGGACCTGATCCATCACAACAATCTGGACA AGGCGCGGGAAACGGTGCGCATGGACGACGACGTGGACGAGCTCTACGCCGCGGTCAAAACCTATCTGACGCTGATCTCG CGCGAGCAGCTCGACGAAGCCGACAGCCGCCGCTGGACCGACATCATTTCATTGACGATCAACCTGGAACATGCGGGCGA CATCATCGAACGGATCGTGGGCGATATCGAGGAAAAGAAGATCGCTCACCGGCTGTCGTTTTCGGAGGAAGGGCTGGGTG AACTGGACGATTTGCAGGCACGCCTCGTCAGCAACCTCCAGCTTGGCCTGTCGGTGTTTCTGAATAACGACTTGCGGTGC GCCGAGCGCCTGCTGGCGGAGAAGGAGCGCTTTCGCGATCTGGAGCGCGCCTATTCATACCGGCATCTGGACCGGCTCGC CGGGCAAACCTTGCGAAGCATCGAGACCAGTGCACTGCATCTCGATCTGATCAGCGACATGAAGCGGCTCAATTCGCTAT TCTGCTCGACCGCCTATCCGGTGCTCGACGCAGCCGGCGCGTTGCACGACACGCGCCTGCGCAAGCGCGCGCTCGATACG ATGCACGTGAAGGAATAG
Upstream 100 bases:
>100_bases AGCGTATATTTAAACGCACAAAATTACAATATGGCAAAAATGTGCAACACTACTGTCATATACGCTCCGGTGCCGGTTCG CGCGGCACGCGGTTCGGGTC
Downstream 100 bases:
>100_bases GCTTCCCGCCTCACGCCTCACGCCTCACGCCTCACGCCTTACGCCTCGCACCTCGCACCTCGCACCTCGCACCTCGCACC TCGCACCTCGCACCTCGCAC
Product: Na+/phosphate symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MAAGTDAQCPMLILLNLLAGVALLVWGSHIVRTGILRVLGADLRSVLGRSTSSRWRAFLSGVGVTSLVQSSNATAVIVTS FAAQGLLPLASGLAIMLGADVGTALMARVLTLDLSWLSPILILLGVPLFLSRKQTRLGQAGRTLIGLGLILLALRLIVEA AQPMMQGAGVRVMFGALTGDTMLDALVGAAFAMLSYSSLAAVLLTATLASSGVISLKVALCLVIGANLGSGLLALLGTVA QNAAARRLALGSFAFKLAGALLILPFTSLLARGLPVLIANPREATVGFHLIYNALRCCACLSLIDPVARICVRILPNRPV PNGELRPLHLDTAALSTPTLALAHAAREVLRIGDIVRTMLDNVADLIHHNNLDKARETVRMDDDVDELYAAVKTYLTLIS REQLDEADSRRWTDIISLTINLEHAGDIIERIVGDIEEKKIAHRLSFSEEGLGELDDLQARLVSNLQLGLSVFLNNDLRC AERLLAEKERFRDLERAYSYRHLDRLAGQTLRSIETSALHLDLISDMKRLNSLFCSTAYPVLDAAGALHDTRLRKRALDT MHVKE
Sequences:
>Translated_565_residues MAAGTDAQCPMLILLNLLAGVALLVWGSHIVRTGILRVLGADLRSVLGRSTSSRWRAFLSGVGVTSLVQSSNATAVIVTS FAAQGLLPLASGLAIMLGADVGTALMARVLTLDLSWLSPILILLGVPLFLSRKQTRLGQAGRTLIGLGLILLALRLIVEA AQPMMQGAGVRVMFGALTGDTMLDALVGAAFAMLSYSSLAAVLLTATLASSGVISLKVALCLVIGANLGSGLLALLGTVA QNAAARRLALGSFAFKLAGALLILPFTSLLARGLPVLIANPREATVGFHLIYNALRCCACLSLIDPVARICVRILPNRPV PNGELRPLHLDTAALSTPTLALAHAAREVLRIGDIVRTMLDNVADLIHHNNLDKARETVRMDDDVDELYAAVKTYLTLIS REQLDEADSRRWTDIISLTINLEHAGDIIERIVGDIEEKKIAHRLSFSEEGLGELDDLQARLVSNLQLGLSVFLNNDLRC AERLLAEKERFRDLERAYSYRHLDRLAGQTLRSIETSALHLDLISDMKRLNSLFCSTAYPVLDAAGALHDTRLRKRALDT MHVKE >Mature_564_residues AAGTDAQCPMLILLNLLAGVALLVWGSHIVRTGILRVLGADLRSVLGRSTSSRWRAFLSGVGVTSLVQSSNATAVIVTSF AAQGLLPLASGLAIMLGADVGTALMARVLTLDLSWLSPILILLGVPLFLSRKQTRLGQAGRTLIGLGLILLALRLIVEAA QPMMQGAGVRVMFGALTGDTMLDALVGAAFAMLSYSSLAAVLLTATLASSGVISLKVALCLVIGANLGSGLLALLGTVAQ NAAARRLALGSFAFKLAGALLILPFTSLLARGLPVLIANPREATVGFHLIYNALRCCACLSLIDPVARICVRILPNRPVP NGELRPLHLDTAALSTPTLALAHAAREVLRIGDIVRTMLDNVADLIHHNNLDKARETVRMDDDVDELYAAVKTYLTLISR EQLDEADSRRWTDIISLTINLEHAGDIIERIVGDIEEKKIAHRLSFSEEGLGELDDLQARLVSNLQLGLSVFLNNDLRCA ERLLAEKERFRDLERAYSYRHLDRLAGQTLRSIETSALHLDLISDMKRLNSLFCSTAYPVLDAAGALHDTRLRKRALDTM HVKE
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=533, Percent_Identity=57.5984990619137, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 60758; Mature: 60627
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGTDAQCPMLILLNLLAGVALLVWGSHIVRTGILRVLGADLRSVLGRSTSSRWRAFLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVGVTSLVQSSNATAVIVTSFAAQGLLPLASGLAIMLGADVGTALMARVLTLDLSWLSPI CCCHHHHHHCCCCCEEEEEHHHHHCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH LILLGVPLFLSRKQTRLGQAGRTLIGLGLILLALRLIVEAAQPMMQGAGVRVMFGALTGD HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCHH TMLDALVGAAFAMLSYSSLAAVLLTATLASSGVISLKVALCLVIGANLGSGLLALLGTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH QNAAARRLALGSFAFKLAGALLILPFTSLLARGLPVLIANPREATVGFHLIYNALRCCAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH LSLIDPVARICVRILPNRPVPNGELRPLHLDTAALSTPTLALAHAAREVLRIGDIVRTML HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DNVADLIHHNNLDKARETVRMDDDVDELYAAVKTYLTLISREQLDEADSRRWTDIISLTI HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE NLEHAGDIIERIVGDIEEKKIAHRLSFSEEGLGELDDLQARLVSNLQLGLSVFLNNDLRC EHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH AERLLAEKERFRDLERAYSYRHLDRLAGQTLRSIETSALHLDLISDMKRLNSLFCSTAYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAAGALHDTRLRKRALDTMHVKE HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAGTDAQCPMLILLNLLAGVALLVWGSHIVRTGILRVLGADLRSVLGRSTSSRWRAFLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVGVTSLVQSSNATAVIVTSFAAQGLLPLASGLAIMLGADVGTALMARVLTLDLSWLSPI CCCHHHHHHCCCCCEEEEEHHHHHCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH LILLGVPLFLSRKQTRLGQAGRTLIGLGLILLALRLIVEAAQPMMQGAGVRVMFGALTGD HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCHH TMLDALVGAAFAMLSYSSLAAVLLTATLASSGVISLKVALCLVIGANLGSGLLALLGTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH QNAAARRLALGSFAFKLAGALLILPFTSLLARGLPVLIANPREATVGFHLIYNALRCCAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH LSLIDPVARICVRILPNRPVPNGELRPLHLDTAALSTPTLALAHAAREVLRIGDIVRTML HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DNVADLIHHNNLDKARETVRMDDDVDELYAAVKTYLTLISREQLDEADSRRWTDIISLTI HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE NLEHAGDIIERIVGDIEEKKIAHRLSFSEEGLGELDDLQARLVSNLQLGLSVFLNNDLRC EHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH AERLLAEKERFRDLERAYSYRHLDRLAGQTLRSIETSALHLDLISDMKRLNSLFCSTAYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAAGALHDTRLRKRALDTMHVKE HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]