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The map label for this gene is gylR [H]

Identifier: 91781610

GI number: 91781610

Start: 263031

End: 263930

Strand: Reverse

Name: gylR [H]

Synonym: Bxe_A4236

Alternate gene names: 91781610

Gene position: 263930-263031 (Counterclockwise)

Preceding gene: 91781618

Following gene: 91781609

Centisome position: 5.39

GC content: 65.67

Gene sequence:

>900_bases
ATGCCTCCAACTGCCCGCTCCGGTGCGATCCGCACCGACGCCGACGCCGCTGAACCGCTCGACACGCCCGAATCCGACGA
CGAAAACGCCGAGACCGGCGAGGAAAAGCTGCGTTCGGGCATCCAGTCGATCGAAGTCGGCTTCAGATTGCTCGACGTCC
TGACCCACGAGCCGCGCGCCATGATGCTGCGCGATCTTGCCCAGCGTGCCGGCATGAGCCCGGCAAAAGCGCACCGTTAT
CTGGTGAGTTTTCTGCGTCTCGGTGTGGTCTCGCAAGACGCCCTGTCGGGTCGTTACGAACTGGGCGGTTTTGCCCTGCA
ACTGGGGCTTGCGCGGCTTGCTCGCGTCGACGGCGTCAAGCTCGCGCGCATCGCGCTGTCCGAATTGCGCGACCGGCTCG
ATCTCACGGTGGGCATCGCGGTATGGGGCAACCAGGGGCCGACCATGGTGCACTGGATGGAATCGAGCTATCCGGCCAAG
GCCTCGCTGAAGCTCGGCGATGTCATGCCGCTGCTCAGTTCCGCCACGGGCCTGCTGTTCGCCGCATATCTGCCGTCGAG
CAAGACCGCCGCGATGCTCGAACGCGAACTGGCCGATTCGCGCCGCTCGTCGCATACGGGCGGCCCGCGCACCCGGGACG
AAGTCGAACAGGTGCTCGCACAAGTGCGTGCGCACCAGGCGGCGCGCGTGGAAGGCATGTTGCTGCCGACCATCCATGCG
TTCTCCATGCCGGTGTTCGACTCGACCGGCGAACTGGCGCTCGGCCTCGTCGCGCTCGGTCACGAAGGCGCGTTCGACAT
TCGCTGGGGTGGCGAGATCGATACGGCATTGCGCGAGTGCGCGCAAAAGCTCTCGTATGAGCTGGGGTATAGTGCGGCGC
CACGTGACGAACAGGCGTGA

Upstream 100 bases:

>100_bases
CTACGATGGTGAATCGACACGGCCCAAGTGCCCGCGCCTGCCTCACCCTGATAGCACCTTTGAATGCGTCACCTTTGAAT
GCGCTCCGTGCGCCCTGCTC

Downstream 100 bases:

>100_bases
TAGCGCGCGTGGGATTTGGTGCGAACGCCGGCTGTGACGCGAAAGGCGATCGCCGGTTATAACGCAAACGGCTGACGAGC
CGGCCGCAAAGCATCGAAGG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MPPTARSGAIRTDADAAEPLDTPESDDENAETGEEKLRSGIQSIEVGFRLLDVLTHEPRAMMLRDLAQRAGMSPAKAHRY
LVSFLRLGVVSQDALSGRYELGGFALQLGLARLARVDGVKLARIALSELRDRLDLTVGIAVWGNQGPTMVHWMESSYPAK
ASLKLGDVMPLLSSATGLLFAAYLPSSKTAAMLERELADSRRSSHTGGPRTRDEVEQVLAQVRAHQAARVEGMLLPTIHA
FSMPVFDSTGELALGLVALGHEGAFDIRWGGEIDTALRECAQKLSYELGYSAAPRDEQA

Sequences:

>Translated_299_residues
MPPTARSGAIRTDADAAEPLDTPESDDENAETGEEKLRSGIQSIEVGFRLLDVLTHEPRAMMLRDLAQRAGMSPAKAHRY
LVSFLRLGVVSQDALSGRYELGGFALQLGLARLARVDGVKLARIALSELRDRLDLTVGIAVWGNQGPTMVHWMESSYPAK
ASLKLGDVMPLLSSATGLLFAAYLPSSKTAAMLERELADSRRSSHTGGPRTRDEVEQVLAQVRAHQAARVEGMLLPTIHA
FSMPVFDSTGELALGLVALGHEGAFDIRWGGEIDTALRECAQKLSYELGYSAAPRDEQA
>Mature_298_residues
PPTARSGAIRTDADAAEPLDTPESDDENAETGEEKLRSGIQSIEVGFRLLDVLTHEPRAMMLRDLAQRAGMSPAKAHRYL
VSFLRLGVVSQDALSGRYELGGFALQLGLARLARVDGVKLARIALSELRDRLDLTVGIAVWGNQGPTMVHWMESSYPAKA
SLKLGDVMPLLSSATGLLFAAYLPSSKTAAMLERELADSRRSSHTGGPRTRDEVEQVLAQVRAHQAARVEGMLLPTIHAF
SMPVFDSTGELALGLVALGHEGAFDIRWGGEIDTALRECAQKLSYELGYSAAPRDEQA

Specific function: May be an activator protein for the gylABX operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=238, Percent_Identity=26.0504201680672, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789999, Length=282, Percent_Identity=25.886524822695, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 32335; Mature: 32204

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTARSGAIRTDADAAEPLDTPESDDENAETGEEKLRSGIQSIEVGFRLLDVLTHEPRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MMLRDLAQRAGMSPAKAHRYLVSFLRLGVVSQDALSGRYELGGFALQLGLARLARVDGVK
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
LARIALSELRDRLDLTVGIAVWGNQGPTMVHWMESSYPAKASLKLGDVMPLLSSATGLLF
HHHHHHHHHHHHHCEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
AAYLPSSKTAAMLERELADSRRSSHTGGPRTRDEVEQVLAQVRAHQAARVEGMLLPTIHA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHH
FSMPVFDSTGELALGLVALGHEGAFDIRWGGEIDTALRECAQKLSYELGYSAAPRDEQA
HCCCCCCCCCHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PPTARSGAIRTDADAAEPLDTPESDDENAETGEEKLRSGIQSIEVGFRLLDVLTHEPRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MMLRDLAQRAGMSPAKAHRYLVSFLRLGVVSQDALSGRYELGGFALQLGLARLARVDGVK
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
LARIALSELRDRLDLTVGIAVWGNQGPTMVHWMESSYPAKASLKLGDVMPLLSSATGLLF
HHHHHHHHHHHHHCEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
AAYLPSSKTAAMLERELADSRRSSHTGGPRTRDEVEQVLAQVRAHQAARVEGMLLPTIHA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHH
FSMPVFDSTGELALGLVALGHEGAFDIRWGGEIDTALRECAQKLSYELGYSAAPRDEQA
HCCCCCCCCCHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3225846; 12000953 [H]