| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781609
Identifier: 91781609
GI number: 91781609
Start: 261435
End: 262736
Strand: Reverse
Name: 91781609
Synonym: Bxe_A4237
Alternate gene names: NA
Gene position: 262736-261435 (Counterclockwise)
Preceding gene: 91781610
Following gene: 91781608
Centisome position: 5.37
GC content: 69.2
Gene sequence:
>1302_bases ATGTCCACCGCTCCCGCCGCCCGCCGCTCCGATCGCACGCCGCCCAGCGGGCCGCGCACCGGTTGGCGCGCGGGACGCTG GATCGCGGTGCTGCTGATCGTGGCCGTGTTGCACTGGATTGCCGCGCAATGGGTCGAGCGCAACCGCGCGACGCTCAATC CGTCGGACGACGGGCATGTGCCCGTGCAGGTCGCATTGCTGACGCCGGAACGTGTCGAACGCAATCCGGCCGCCGCCGCG TCGTCCACGCCGGAACCCGCGCCCGCGCGCCGAACTGCGGCGCACAAGCCGCGCGAACCTGTATTGACGGCGCTGCAACC GGCCAAGCAAGCCGCGCCGGCAACGCCTGCGGCGACATCGGACGCCGTGGCGAGCGCGCCGGACGCAGCAGGCGCCAATG CGGCTCCCAACGCCGCCGCCGGCGCCGCGAGCACGGCGGCCAGCGCGCCCGCGCCGGCAAGTGCGCCGCAGGCGTCGCCC GGCGTGAAGTTCTCCGTCCCGCCATCCGGCGAACTGCAATACGACACGTTCTACAACGGCGTGCGCAACCAGCCCGGCAC GATCCACTGGACCAGCAGCGCACAAAGCTACGAGATGGTCGTCTCCGTGCCGCTGCCTTTTGTCGGCACATTCGTGTATT CGAGCCACGGCCGTATCGACGCATTCGGCCTCGCGCCGGATCAGTACATCGAAAAGCGCGGCCGCCGGGCGGAAGACATC GCGATCTTCAATCGCACCGACAGGAAAATCGCCTTTACGCGCACCCCGGCCGCACTGCCGTTGCCCGACGGCGCGCAAGA CCGCTTCAGCATGGTGATGCAGTTGGCCAGCCTCGTGCGTGGTGACCCGGCCGCCTACAAGCCCGGCGTGACGCGGCAGT TCTTCGTGGTCGATAACGATAGCGGCGAAAACTGGCCGGTCGAGACGATCGGCGACGAAACCATCCGCACGGACCAGGGG TTCCTCGATACGCGCCATTTCAAGCGCCTGCCCCGCCGTGACGGCGACTTGCGCCGCATCGACGTATGGCTCGCGCCGTC GCTCGGCTGGCTGCCCGCGCGCATCGTTCAGACGGAACCGAACGGCACGCAGTTCGAGCTGGTGTGGCGTGGCAAGCTCA ACGCCGGAAACGCCGGCAGCCCGCCGGAGAACAACGGCGATGCCGGCGCGGCTTCCCCTGACAATCCGGGCGGATCGTCT CCTTCGGCCTCACCGGCCGTTACGCCCGGCGCCGCGCCCTCTTCACCTTCACCTGTCGATTCGACCAGCCCCGCCGATAC ACCCGGCATCATCAAACCCTGA
Upstream 100 bases:
>100_bases GCTTCGCAGATCAGGCCTCGCGCTTCTTTGCCAATCGTCGCAGCGCACGTCCGCTGATATTCAAACCCCACGCTTTCCTT GCCCACACATTCATCTACCG
Downstream 100 bases:
>100_bases AAGCCACACACTGCGCAGGGTCTCGATCAGATCGGCGAAACTTCCACGCCAACGCTCACTCGCAACACATTGCTGCAACC GTTCGCGTCGGCGCTGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Proline-Rich Signal Peptide Protein; Prolin-Rich Protein
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSTAPAARRSDRTPPSGPRTGWRAGRWIAVLLIVAVLHWIAAQWVERNRATLNPSDDGHVPVQVALLTPERVERNPAAAA SSTPEPAPARRTAAHKPREPVLTALQPAKQAAPATPAATSDAVASAPDAAGANAAPNAAAGAASTAASAPAPASAPQASP GVKFSVPPSGELQYDTFYNGVRNQPGTIHWTSSAQSYEMVVSVPLPFVGTFVYSSHGRIDAFGLAPDQYIEKRGRRAEDI AIFNRTDRKIAFTRTPAALPLPDGAQDRFSMVMQLASLVRGDPAAYKPGVTRQFFVVDNDSGENWPVETIGDETIRTDQG FLDTRHFKRLPRRDGDLRRIDVWLAPSLGWLPARIVQTEPNGTQFELVWRGKLNAGNAGSPPENNGDAGAASPDNPGGSS PSASPAVTPGAAPSSPSPVDSTSPADTPGIIKP
Sequences:
>Translated_433_residues MSTAPAARRSDRTPPSGPRTGWRAGRWIAVLLIVAVLHWIAAQWVERNRATLNPSDDGHVPVQVALLTPERVERNPAAAA SSTPEPAPARRTAAHKPREPVLTALQPAKQAAPATPAATSDAVASAPDAAGANAAPNAAAGAASTAASAPAPASAPQASP GVKFSVPPSGELQYDTFYNGVRNQPGTIHWTSSAQSYEMVVSVPLPFVGTFVYSSHGRIDAFGLAPDQYIEKRGRRAEDI AIFNRTDRKIAFTRTPAALPLPDGAQDRFSMVMQLASLVRGDPAAYKPGVTRQFFVVDNDSGENWPVETIGDETIRTDQG FLDTRHFKRLPRRDGDLRRIDVWLAPSLGWLPARIVQTEPNGTQFELVWRGKLNAGNAGSPPENNGDAGAASPDNPGGSS PSASPAVTPGAAPSSPSPVDSTSPADTPGIIKP >Mature_432_residues STAPAARRSDRTPPSGPRTGWRAGRWIAVLLIVAVLHWIAAQWVERNRATLNPSDDGHVPVQVALLTPERVERNPAAAAS STPEPAPARRTAAHKPREPVLTALQPAKQAAPATPAATSDAVASAPDAAGANAAPNAAAGAASTAASAPAPASAPQASPG VKFSVPPSGELQYDTFYNGVRNQPGTIHWTSSAQSYEMVVSVPLPFVGTFVYSSHGRIDAFGLAPDQYIEKRGRRAEDIA IFNRTDRKIAFTRTPAALPLPDGAQDRFSMVMQLASLVRGDPAAYKPGVTRQFFVVDNDSGENWPVETIGDETIRTDQGF LDTRHFKRLPRRDGDLRRIDVWLAPSLGWLPARIVQTEPNGTQFELVWRGKLNAGNAGSPPENNGDAGAASPDNPGGSSP SASPAVTPGAAPSSPSPVDSTSPADTPGIIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45540; Mature: 45409
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPAARRSDRTPPSGPRTGWRAGRWIAVLLIVAVLHWIAAQWVERNRATLNPSDDGHV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PVQVALLTPERVERNPAAAASSTPEPAPARRTAAHKPREPVLTALQPAKQAAPATPAATS CEEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC DAVASAPDAAGANAAPNAAAGAASTAASAPAPASAPQASPGVKFSVPPSGELQYDTFYNG CHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHH VRNQPGTIHWTSSAQSYEMVVSVPLPFVGTFVYSSHGRIDAFGLAPDQYIEKRGRRAEDI HCCCCCEEEECCCCCCEEEEEECCCCHHHHHEECCCCCEEEECCCHHHHHHHHCCCCCEE AIFNRTDRKIAFTRTPAALPLPDGAQDRFSMVMQLASLVRGDPAAYKPGVTRQFFVVDND EEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC SGENWPVETIGDETIRTDQGFLDTRHFKRLPRRDGDLRRIDVWLAPSLGWLPARIVQTEP CCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECC NGTQFELVWRGKLNAGNAGSPPENNGDAGAASPDNPGGSSPSASPAVTPGAAPSSPSPVD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STSPADTPGIIKP CCCCCCCCCCCCC >Mature Secondary Structure STAPAARRSDRTPPSGPRTGWRAGRWIAVLLIVAVLHWIAAQWVERNRATLNPSDDGHV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PVQVALLTPERVERNPAAAASSTPEPAPARRTAAHKPREPVLTALQPAKQAAPATPAATS CEEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC DAVASAPDAAGANAAPNAAAGAASTAASAPAPASAPQASPGVKFSVPPSGELQYDTFYNG CHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHH VRNQPGTIHWTSSAQSYEMVVSVPLPFVGTFVYSSHGRIDAFGLAPDQYIEKRGRRAEDI HCCCCCEEEECCCCCCEEEEEECCCCHHHHHEECCCCCEEEECCCHHHHHHHHCCCCCEE AIFNRTDRKIAFTRTPAALPLPDGAQDRFSMVMQLASLVRGDPAAYKPGVTRQFFVVDND EEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC SGENWPVETIGDETIRTDQGFLDTRHFKRLPRRDGDLRRIDVWLAPSLGWLPARIVQTEP CCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECC NGTQFELVWRGKLNAGNAGSPPENNGDAGAASPDNPGGSSPSASPAVTPGAAPSSPSPVD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STSPADTPGIIKP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA