| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is catD [H]
Identifier: 91781608
GI number: 91781608
Start: 260463
End: 261251
Strand: Reverse
Name: catD [H]
Synonym: Bxe_A4238
Alternate gene names: 91781608
Gene position: 261251-260463 (Counterclockwise)
Preceding gene: 91781609
Following gene: 91781607
Centisome position: 5.34
GC content: 64.51
Gene sequence:
>789_bases ATGCAAGTGAACATCAACGGTATCGAGACGCGCTATGTGCTGAGCAACGAAGGCGGCGGCCCGTGGCTGACATTCGCCCA CCAGCTTGGCGGCGATCTGTCCGTTTGGGACCAGCTCGCCGGCTATTTTCGCGACGACTACACCGTATTGCGCTACGACC TGCGCGGCCACGGCAAGACCGCGATATCCGGCGCGCCCTTCAGCGTCGCCGATCTGTCGCACGATCTCGCCGCGCTGCTC GACGCGCTCGATGCACCTCATACGCACCTGGTGGGCATGTCGATGGGCGGCATGGTCGCGCAGCAGTTCGCGCTCGATCA TCCCACGCGCGTCGACACCTTGACGATCGCCGACAGCAGCGCCGGCACGCTGCCGGAAGCCCGCGCCAGCTGGGATCAGC GTGCCGCGGCGGCCCGCAGCGACGGGATGGCGCCGCTCGTGCCCGCGACATTGAACCGCTGGCTGACAGCCGATTTTCAG AGCGCGCACCCCGAAGCCGTCGAGCAGATCCGCGACGTATTGCTGCAGACGTTGTCAGAAGGCTACGCCAGGGCGTGCGA AGCCCTGCGCGATTTCGACGTACGCAGTAAGCTGGCAACAATCCGATGCCCAACATTGACCGTGGCGGGCCGCCACGACA CGGGCACGCCGCCTGCTGCTACGCAGGCGATAGCAGACGCCATTGAAGGCGCACGTTTCGAACTGCTGGATGCCGCTCAT CTCGCGCCCGTCGAGCAATCTCACCGTTTTGCTGCACTGCTTGAAACGTTTCTTGAAAGGCCGGTCTAA
Upstream 100 bases:
>100_bases CGCGTCGGCGCTGCGTATATACGGTCAGCCGTGTACCCCGGCTGGGGTACGGCTTGCGCGAAGGGTCCCTTCCACTGCGT TCCTCTTCAAAGGAGTCCGC
Downstream 100 bases:
>100_bases CCGGTAGGTTCGGAACCTTTACAAGCATCAATCCGGACCCACCCCTTGAATTCCAAACCATACGCTCCACCTATGGCGCA GGACTGGCCAGGAGCCAACG
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQVNINGIETRYVLSNEGGGPWLTFAHQLGGDLSVWDQLAGYFRDDYTVLRYDLRGHGKTAISGAPFSVADLSHDLAALL DALDAPHTHLVGMSMGGMVAQQFALDHPTRVDTLTIADSSAGTLPEARASWDQRAAAARSDGMAPLVPATLNRWLTADFQ SAHPEAVEQIRDVLLQTLSEGYARACEALRDFDVRSKLATIRCPTLTVAGRHDTGTPPAATQAIADAIEGARFELLDAAH LAPVEQSHRFAALLETFLERPV
Sequences:
>Translated_262_residues MQVNINGIETRYVLSNEGGGPWLTFAHQLGGDLSVWDQLAGYFRDDYTVLRYDLRGHGKTAISGAPFSVADLSHDLAALL DALDAPHTHLVGMSMGGMVAQQFALDHPTRVDTLTIADSSAGTLPEARASWDQRAAAARSDGMAPLVPATLNRWLTADFQ SAHPEAVEQIRDVLLQTLSEGYARACEALRDFDVRSKLATIRCPTLTVAGRHDTGTPPAATQAIADAIEGARFELLDAAH LAPVEQSHRFAALLETFLERPV >Mature_262_residues MQVNINGIETRYVLSNEGGGPWLTFAHQLGGDLSVWDQLAGYFRDDYTVLRYDLRGHGKTAISGAPFSVADLSHDLAALL DALDAPHTHLVGMSMGGMVAQQFALDHPTRVDTLTIADSSAGTLPEARASWDQRAAAARSDGMAPLVPATLNRWLTADFQ SAHPEAVEQIRDVLLQTLSEGYARACEALRDFDVRSKLATIRCPTLTVAGRHDTGTPPAATQAIADAIEGARFELLDAAH LAPVEQSHRFAALLETFLERPV
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28267; Mature: 28267
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVNINGIETRYVLSNEGGGPWLTFAHQLGGDLSVWDQLAGYFRDDYTVLRYDLRGHGKT CEEECCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCE AISGAPFSVADLSHDLAALLDALDAPHTHLVGMSMGGMVAQQFALDHPTRVDTLTIADSS EECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECCC AGTLPEARASWDQRAAAARSDGMAPLVPATLNRWLTADFQSAHPEAVEQIRDVLLQTLSE CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH GYARACEALRDFDVRSKLATIRCPTLTVAGRHDTGTPPAATQAIADAIEGARFELLDAAH HHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH LAPVEQSHRFAALLETFLERPV HCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQVNINGIETRYVLSNEGGGPWLTFAHQLGGDLSVWDQLAGYFRDDYTVLRYDLRGHGKT CEEECCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCE AISGAPFSVADLSHDLAALLDALDAPHTHLVGMSMGGMVAQQFALDHPTRVDTLTIADSS EECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECCC AGTLPEARASWDQRAAAARSDGMAPLVPATLNRWLTADFQSAHPEAVEQIRDVLLQTLSE CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH GYARACEALRDFDVRSKLATIRCPTLTVAGRHDTGTPPAATQAIADAIEGARFELLDAAH HHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH LAPVEQSHRFAALLETFLERPV HCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]