| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is can [H]
Identifier: 91781592
GI number: 91781592
Start: 241369
End: 242145
Strand: Reverse
Name: can [H]
Synonym: Bxe_A4254
Alternate gene names: 91781592
Gene position: 242145-241369 (Counterclockwise)
Preceding gene: 91781593
Following gene: 91781591
Centisome position: 4.95
GC content: 63.45
Gene sequence:
>777_bases ATGAACACTAACGCTTCGCCTCCTGACAATCCGCTCTCGCATCTGTTCGACAACAACGAAGCGTGGGTTGCCCGCAAGCT GTCCGAAGACCCTGAGTATTTTTCGCGCCTCGCTCATCAGCAGACGCCCGAGTATCTGTGGATCGGCTGCTCCGATTCGC GCGTGCCGGCGAACCAGATCATCGGCCTGCCGCCGGGCGAAGTGTTCGTGCACAGAAACATTGCCAACGTGGTGGTGCAT ACCGATCTGAACTGTCTGTCGGTCATCCAGTTCGCCGTCGATCTGCTGAAGGTCAAGCACATCATGGTGGTCGGCCACTA CGGCTGCTCGGGCGTCGGCGCGGCGCTGCACGGCCGCCGCGTGGGTCTCGCGGACAACTGGCTGCATCACGTGCAGGACG TGCGCACCAAGCATGCGGCGCTGATCGAGGAATGGCCGATCGGTGAGGCGCGTCACCGGCGCCTGGTCGAACTGAACGCG ATCGAACAGGTGATGAACGTATGCCGCACCACCATCGTCAACGACGCGTGGGCACGCGGCCAGGAGTTGACCGTGCACGG CTGGGCGTATGGCGTGCATGACGGCAAGGTGCGCAATCTCGGCATGACGATCCGCGAGCCGGGCGCGCTCGACGCAACCT ATCAGAAGTGTGTGGCGGCAGTGTCGGCCGGCGGCGCACACAACGCGGACAACGACGTGGTGGCCGCCGACGCGGCGCAG CTCGGCGACGTGCCGGCCATTGTCGAAGGCGTCATCAAGGAGCTTAAACATGAGTGA
Upstream 100 bases:
>100_bases GCGTGAGACTCATACGCTGCTCGCCGTGTTGAATGCCTCGTCCTAACCTTATGTAACGACATCGACCGGTCAAGCGGTCG AGCAACCACTCAGACGCACC
Downstream 100 bases:
>100_bases GACACACATGAGCGGGACAAAAGCTGATCCGATCGTCATCGTGGGCGTGGCCCGCACGCCGATGGCGGCATTCCAGGGCG ACTTCGCCACGCTGAGCGCG
Product: putative carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNTNASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVH TDLNCLSVIQFAVDLLKVKHIMVVGHYGCSGVGAALHGRRVGLADNWLHHVQDVRTKHAALIEEWPIGEARHRRLVELNA IEQVMNVCRTTIVNDAWARGQELTVHGWAYGVHDGKVRNLGMTIREPGALDATYQKCVAAVSAGGAHNADNDVVAADAAQ LGDVPAIVEGVIKELKHE
Sequences:
>Translated_258_residues MNTNASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVH TDLNCLSVIQFAVDLLKVKHIMVVGHYGCSGVGAALHGRRVGLADNWLHHVQDVRTKHAALIEEWPIGEARHRRLVELNA IEQVMNVCRTTIVNDAWARGQELTVHGWAYGVHDGKVRNLGMTIREPGALDATYQKCVAAVSAGGAHNADNDVVAADAAQ LGDVPAIVEGVIKELKHE >Mature_258_residues MNTNASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVH TDLNCLSVIQFAVDLLKVKHIMVVGHYGCSGVGAALHGRRVGLADNWLHHVQDVRTKHAALIEEWPIGEARHRRLVELNA IEQVMNVCRTTIVNDAWARGQELTVHGWAYGVHDGKVRNLGMTIREPGALDATYQKCVAAVSAGGAHNADNDVVAADAAQ LGDVPAIVEGVIKELKHE
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=205, Percent_Identity=52.1951219512195, Blast_Score=235, Evalue=2e-63, Organism=Escherichia coli, GI1786534, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324292, Length=196, Percent_Identity=30.1020408163265, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28277; Mature: 28277
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPANQI CCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHE IGLPPGEVFVHRNIANVVVHTDLNCLSVIQFAVDLLKVKHIMVVGHYGCSGVGAALHGRR ECCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCCC VGLADNWLHHVQDVRTKHAALIEEWPIGEARHRRLVELNAIEQVMNVCRTTIVNDAWARG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QELTVHGWAYGVHDGKVRNLGMTIREPGALDATYQKCVAAVSAGGAHNADNDVVAADAAQ CEEEEEEEEEECCCCCEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECHHH LGDVPAIVEGVIKELKHE HCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNTNASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPANQI CCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHE IGLPPGEVFVHRNIANVVVHTDLNCLSVIQFAVDLLKVKHIMVVGHYGCSGVGAALHGRR ECCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCCC VGLADNWLHHVQDVRTKHAALIEEWPIGEARHRRLVELNAIEQVMNVCRTTIVNDAWARG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QELTVHGWAYGVHDGKVRNLGMTIREPGALDATYQKCVAAVSAGGAHNADNDVVAADAAQ CEEEEEEEEEECCCCCEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECHHH LGDVPAIVEGVIKELKHE HCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]