| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is thlA [H]
Identifier: 91781591
GI number: 91781591
Start: 240168
End: 241376
Strand: Reverse
Name: thlA [H]
Synonym: Bxe_A4255
Alternate gene names: 91781591
Gene position: 241376-240168 (Counterclockwise)
Preceding gene: 91781592
Following gene: 91781590
Centisome position: 4.93
GC content: 65.92
Gene sequence:
>1209_bases ATGAGTGAGACACACATGAGCGGGACAAAAGCTGATCCGATCGTCATCGTGGGCGTGGCCCGCACGCCGATGGCGGCATT CCAGGGCGACTTCGCCACGCTGAGCGCGCCGCAATTGGGTTCGGTGGCAATCCAGGCGGCCGTGCAGCGCGCCGGCCTTA AACCCGAACAGATCGACGAAGTGGTGATGGGTTGCGTGCTGCCCGCCGGCCTCGGCCAGGCGCCCGCGCGTCAGGCCGCG CTCGGCGCCGGCTTGCCGCTCGCCACCGGCAGCACCACGGTGAACAAGATGTGCGGCTCAGGCATGCGCGCGGCCATGTT CGCGCACGACATGCTCGCCGCGGGTTCCGTCGACGTGATCGTTGCGGGCGGCATGGAAAGCATGACGAACGCGCCGTATC TGCTGCCCAAAGCGCGGGCGGGAATGCGCATGGGCCACGGTCAGGTGATCGACCACATGTTCTACGACGGTCTCGAAGAC GCCTATGAAAAAGGCCGTCTGATGGGCTCCTTCGCCGAGGAATGCGCGGCTTCGTTCGACTTCACGCGCGAGGCGCAGGA CGCGTTCGCCGTCGAGTCGCTCGCTCGTGCTAAGCGTGCGAACGAGGACGGTTCGTTCGCCTGGGAAATCGCGCCGGTGA AAGTGGAGAGCCGCAAGGGCGAAGTCACCATCGATCGCGACGAACAGCCGTTCAAAGCGAACATCGAGAAGATTCCGACG CTCAAGCCCGCGTTCAGCAAAACCGGCACCGTGACGGCGGCGAACTCGTCGTCGATTTCCGACGGCGCGGCCGCGCTCGT CATGATGCGCGAGTCGACGGCGAAGCGCCTGGGCGTCCAGCCGATTGCGCGCGTGGTCGGCCACTCGACCCTCGCGCAGG AACCGGCGAAGTTCACCACCGCGCCGGTCGGCGCGATTCGCAAGCTGTTCGAGAAGAACGGCTGGCGCGCCGACGAAGTC GATCTGTTTGAAGTCAACGAAGCCTTTGCTGTCGTGACGATGGCCGCCATGAAGGAGCACCATCTGCCGCACGAGAAGGT CAACGTGAACGGCGGCGCCTGTGCGCTCGGCCACCCGATCGGCGCGTCGGGCGCGCGCATTCTCGTCACGCTGATCGGCG CGCTGAAAAAGCGCGGCGGCAAGCGCGGCGTCGCGACGCTGTGTATCGGCGGCGGCGAAGCGACGGCAATGGGTATCGAA CTCGTGTAA
Upstream 100 bases:
>100_bases GGCGGCGCACACAACGCGGACAACGACGTGGTGGCCGCCGACGCGGCGCAGCTCGGCGACGTGCCGGCCATTGTCGAAGG CGTCATCAAGGAGCTTAAAC
Downstream 100 bases:
>100_bases CGCGCGTTTTCGCGGCGCTCTGTTTTGATGGCTTGAGGTGTTCGATGAAGACTGTGTTGATCGTCGGTGCGTCGCGTGGC ATTGGCCAGGAGTTTGTGCG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSETHMSGTKADPIVIVGVARTPMAAFQGDFATLSAPQLGSVAIQAAVQRAGLKPEQIDEVVMGCVLPAGLGQAPARQAA LGAGLPLATGSTTVNKMCGSGMRAAMFAHDMLAAGSVDVIVAGGMESMTNAPYLLPKARAGMRMGHGQVIDHMFYDGLED AYEKGRLMGSFAEECAASFDFTREAQDAFAVESLARAKRANEDGSFAWEIAPVKVESRKGEVTIDRDEQPFKANIEKIPT LKPAFSKTGTVTAANSSSISDGAAALVMMRESTAKRLGVQPIARVVGHSTLAQEPAKFTTAPVGAIRKLFEKNGWRADEV DLFEVNEAFAVVTMAAMKEHHLPHEKVNVNGGACALGHPIGASGARILVTLIGALKKRGGKRGVATLCIGGGEATAMGIE LV
Sequences:
>Translated_402_residues MSETHMSGTKADPIVIVGVARTPMAAFQGDFATLSAPQLGSVAIQAAVQRAGLKPEQIDEVVMGCVLPAGLGQAPARQAA LGAGLPLATGSTTVNKMCGSGMRAAMFAHDMLAAGSVDVIVAGGMESMTNAPYLLPKARAGMRMGHGQVIDHMFYDGLED AYEKGRLMGSFAEECAASFDFTREAQDAFAVESLARAKRANEDGSFAWEIAPVKVESRKGEVTIDRDEQPFKANIEKIPT LKPAFSKTGTVTAANSSSISDGAAALVMMRESTAKRLGVQPIARVVGHSTLAQEPAKFTTAPVGAIRKLFEKNGWRADEV DLFEVNEAFAVVTMAAMKEHHLPHEKVNVNGGACALGHPIGASGARILVTLIGALKKRGGKRGVATLCIGGGEATAMGIE LV >Mature_401_residues SETHMSGTKADPIVIVGVARTPMAAFQGDFATLSAPQLGSVAIQAAVQRAGLKPEQIDEVVMGCVLPAGLGQAPARQAAL GAGLPLATGSTTVNKMCGSGMRAAMFAHDMLAAGSVDVIVAGGMESMTNAPYLLPKARAGMRMGHGQVIDHMFYDGLEDA YEKGRLMGSFAEECAASFDFTREAQDAFAVESLARAKRANEDGSFAWEIAPVKVESRKGEVTIDRDEQPFKANIEKIPTL KPAFSKTGTVTAANSSSISDGAAALVMMRESTAKRLGVQPIARVVGHSTLAQEPAKFTTAPVGAIRKLFEKNGWRADEVD LFEVNEAFAVVTMAAMKEHHLPHEKVNVNGGACALGHPIGASGARILVTLIGALKKRGGKRGVATLCIGGGEATAMGIEL V
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI4557237, Length=402, Percent_Identity=45.5223880597015, Blast_Score=335, Evalue=6e-92, Organism=Homo sapiens, GI148539872, Length=393, Percent_Identity=45.29262086514, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI167614485, Length=389, Percent_Identity=36.2467866323907, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI4501853, Length=390, Percent_Identity=35.8974358974359, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI4504327, Length=439, Percent_Identity=31.6628701594533, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI194353979, Length=388, Percent_Identity=28.3505154639175, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI87082165, Length=388, Percent_Identity=43.8144329896907, Blast_Score=334, Evalue=7e-93, Organism=Escherichia coli, GI1788554, Length=389, Percent_Identity=49.6143958868895, Blast_Score=323, Evalue=9e-90, Organism=Escherichia coli, GI1787663, Length=392, Percent_Identity=37.2448979591837, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI48994986, Length=404, Percent_Identity=36.6336633663366, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1788683, Length=413, Percent_Identity=30.2663438256659, Blast_Score=148, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17535921, Length=390, Percent_Identity=44.6153846153846, Blast_Score=311, Evalue=5e-85, Organism=Caenorhabditis elegans, GI25147385, Length=385, Percent_Identity=41.8181818181818, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI133906874, Length=390, Percent_Identity=39.7435897435897, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17535917, Length=395, Percent_Identity=34.6835443037975, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17551802, Length=421, Percent_Identity=33.0166270783848, Blast_Score=191, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6325229, Length=398, Percent_Identity=44.7236180904523, Blast_Score=329, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6322031, Length=397, Percent_Identity=31.9899244332494, Blast_Score=179, Evalue=7e-46, Organism=Drosophila melanogaster, GI24655093, Length=389, Percent_Identity=44.987146529563, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI24640423, Length=394, Percent_Identity=45.4314720812183, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI17648125, Length=393, Percent_Identity=35.3689567430025, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17137578, Length=421, Percent_Identity=32.541567695962, Blast_Score=176, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 41977; Mature: 41846
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETHMSGTKADPIVIVGVARTPMAAFQGDFATLSAPQLGSVAIQAAVQRAGLKPEQIDE CCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH VVMGCVLPAGLGQAPARQAALGAGLPLATGSTTVNKMCGSGMRAAMFAHDMLAAGSVDVI HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEE VAGGMESMTNAPYLLPKARAGMRMGHGQVIDHMFYDGLEDAYEKGRLMGSFAEECAASFD EECCHHHHCCCCEECCCHHCCCCCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCC FTREAQDAFAVESLARAKRANEDGSFAWEIAPVKVESRKGEVTIDRDEQPFKANIEKIPT CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEECCCCCCHHCCHHHCCC LKPAFSKTGTVTAANSSSISDGAAALVMMRESTAKRLGVQPIARVVGHSTLAQEPAKFTT CCCCCCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHCHHHHHHHHCCHHHHCCCCHHCC APVGAIRKLFEKNGWRADEVDLFEVNEAFAVVTMAAMKEHHLPHEKVNVNGGACALGHPI CCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCC GASGARILVTLIGALKKRGGKRGVATLCIGGGEATAMGIELV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEC >Mature Secondary Structure SETHMSGTKADPIVIVGVARTPMAAFQGDFATLSAPQLGSVAIQAAVQRAGLKPEQIDE CCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH VVMGCVLPAGLGQAPARQAALGAGLPLATGSTTVNKMCGSGMRAAMFAHDMLAAGSVDVI HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEE VAGGMESMTNAPYLLPKARAGMRMGHGQVIDHMFYDGLEDAYEKGRLMGSFAEECAASFD EECCHHHHCCCCEECCCHHCCCCCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCC FTREAQDAFAVESLARAKRANEDGSFAWEIAPVKVESRKGEVTIDRDEQPFKANIEKIPT CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEECCCCCCHHCCHHHCCC LKPAFSKTGTVTAANSSSISDGAAALVMMRESTAKRLGVQPIARVVGHSTLAQEPAKFTT CCCCCCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHCHHHHHHHHCCHHHHCCCCHHCC APVGAIRKLFEKNGWRADEVDLFEVNEAFAVVTMAAMKEHHLPHEKVNVNGGACALGHPI CCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCC GASGARILVTLIGALKKRGGKRGVATLCIGGGEATAMGIELV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]