Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91781586

Identifier: 91781586

GI number: 91781586

Start: 235834

End: 237123

Strand: Reverse

Name: 91781586

Synonym: Bxe_A4260

Alternate gene names: NA

Gene position: 237123-235834 (Counterclockwise)

Preceding gene: 91781588

Following gene: 91781583

Centisome position: 4.84

GC content: 65.19

Gene sequence:

>1290_bases
ATGGTGTTCAGCAAGGTTCTGACGAAGTGTGCGGTGATCTGTGCAGCGGCTACGTGCATGGTCACGCTCGCGCACGCCGA
CCCGCTCACCGACACCCAGGCGGGACCGTTGACCCGCGCGCGCGTGCCGCGCATCGCGCTCGACGACGACGTGTACCTGC
CCACCGCAGGTCTCAACGAACAGATCATCCGCGTGCCGGTCGACGCTGCCGGCACGGTCACCCTCGAAACGACGATCTAC
AAGCCGGACGGCGCGGGCCCGTTTCCGATGATCGTTTTCAACCACGGCAAGATTCCCGGCGACCCGCGCAGTCAGGAGCG
CAGCGACCCGCTGCCGTTCGCACGCGAGTTCGTGCGCCGCGGTTACGTGGTGGTGGCGCCCAACCGCCAGGGTTTCGGCC
ACTCGGACGGCGTTTATCAGCAGGACGGTTGCGACGTTGAAAAGAACGGCATCGGCCAGGCCGGCGACGTTGCCGCCACG
ATCGACTTCATGTCGAAGCAGCCTTACGTGGACGCCACCCACATCGTGGTGGCCGGCACCTCGCACGGCGGCCTGGCGAC
GATGGCGTACGGCACGGAAGCCGCGCCGGGCGTGCGGGCGCTGATCAATTTCTCGGGCGGTTTGCGGCAGGATGCCTGCA
GCGACTGGCAGGGCAATCTGACGCGCGCATTCGGCGCATATGGCGAGAAGACCAGGGTGCCGTCGCTGTGGATGTATGGC
GATAACGATTCGGTCTGGAACGCGCCGCTGGTGGCGGGCATGTATGCCGCGTATGGTGCGCATGGCGCGAGCGCGAAGAT
GGTGGATTTCGGTAGCTACAAGAACGACGCGCACCGGCTGGTCGGCGACCGTGACGGCGTGCATGTGTGGTGGCCGGCTG
TCGAGGCTTTCCTTGCGCGTGTGGGCATGCCGACTGGCGTGCAGTATCGCGTGGCGGATCCTTCCATGCCGAAGGCGAGC
GGGTTTGCCGCCGTCGATGCGGTCGACTCCGTGCCGTTTGTCGATGAAGCCGGACGCAATGGGTATCGGAATTTCTTGCA
TCAGTATCCTAGCCGGGCGTTTGCTGTGTCTGATACGGGGGCCTGGTCGTGGGCTGAAGGTGGCGATGATCCGATGTCGG
TTGCTGTGGCTAATTGCCAGAAGCAGAGTTCGGCGCCTTGCCGGTTGTATGCGGTGAATAATTCGGTTGTTTGGGGGGAG
CAGTCTTCGCAGACGGCTGAGGGGGGTGCGGGTGCGGGCTCGGGCGCGGGTGGCGTCGATGGGCGGCGGGATGTTGCCAG
TCGGGAGTGA

Upstream 100 bases:

>100_bases
TTTTGTTTGTCGAAAACTGCCCGAAAGGCAAATGTCAGCGATTATTTTCGACAACCAGGCATGACGGTGTTCAGGGCAAG
TTTTTGAGGCGGGTGCGTCA

Downstream 100 bases:

>100_bases
AGGTGGGGGGTTTTTGCCTGCTCGGCGGTCTGCTGGGTCGGGCTCGGGCTCGTTGATCTGTGGTTTCCTACGCTTGGGTG
GTCGGCTTTTTCTTGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Peptidase S; Lipoprotein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MVFSKVLTKCAVICAAATCMVTLAHADPLTDTQAGPLTRARVPRIALDDDVYLPTAGLNEQIIRVPVDAAGTVTLETTIY
KPDGAGPFPMIVFNHGKIPGDPRSQERSDPLPFAREFVRRGYVVVAPNRQGFGHSDGVYQQDGCDVEKNGIGQAGDVAAT
IDFMSKQPYVDATHIVVAGTSHGGLATMAYGTEAAPGVRALINFSGGLRQDACSDWQGNLTRAFGAYGEKTRVPSLWMYG
DNDSVWNAPLVAGMYAAYGAHGASAKMVDFGSYKNDAHRLVGDRDGVHVWWPAVEAFLARVGMPTGVQYRVADPSMPKAS
GFAAVDAVDSVPFVDEAGRNGYRNFLHQYPSRAFAVSDTGAWSWAEGGDDPMSVAVANCQKQSSAPCRLYAVNNSVVWGE
QSSQTAEGGAGAGSGAGGVDGRRDVASRE

Sequences:

>Translated_429_residues
MVFSKVLTKCAVICAAATCMVTLAHADPLTDTQAGPLTRARVPRIALDDDVYLPTAGLNEQIIRVPVDAAGTVTLETTIY
KPDGAGPFPMIVFNHGKIPGDPRSQERSDPLPFAREFVRRGYVVVAPNRQGFGHSDGVYQQDGCDVEKNGIGQAGDVAAT
IDFMSKQPYVDATHIVVAGTSHGGLATMAYGTEAAPGVRALINFSGGLRQDACSDWQGNLTRAFGAYGEKTRVPSLWMYG
DNDSVWNAPLVAGMYAAYGAHGASAKMVDFGSYKNDAHRLVGDRDGVHVWWPAVEAFLARVGMPTGVQYRVADPSMPKAS
GFAAVDAVDSVPFVDEAGRNGYRNFLHQYPSRAFAVSDTGAWSWAEGGDDPMSVAVANCQKQSSAPCRLYAVNNSVVWGE
QSSQTAEGGAGAGSGAGGVDGRRDVASRE
>Mature_429_residues
MVFSKVLTKCAVICAAATCMVTLAHADPLTDTQAGPLTRARVPRIALDDDVYLPTAGLNEQIIRVPVDAAGTVTLETTIY
KPDGAGPFPMIVFNHGKIPGDPRSQERSDPLPFAREFVRRGYVVVAPNRQGFGHSDGVYQQDGCDVEKNGIGQAGDVAAT
IDFMSKQPYVDATHIVVAGTSHGGLATMAYGTEAAPGVRALINFSGGLRQDACSDWQGNLTRAFGAYGEKTRVPSLWMYG
DNDSVWNAPLVAGMYAAYGAHGASAKMVDFGSYKNDAHRLVGDRDGVHVWWPAVEAFLARVGMPTGVQYRVADPSMPKAS
GFAAVDAVDSVPFVDEAGRNGYRNFLHQYPSRAFAVSDTGAWSWAEGGDDPMSVAVANCQKQSSAPCRLYAVNNSVVWGE
QSSQTAEGGAGAGSGAGGVDGRRDVASRE

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45376; Mature: 45376

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSKVLTKCAVICAAATCMVTLAHADPLTDTQAGPLTRARVPRIALDDDVYLPTAGLNE
CCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCEEEECCCEEECCCCCCC
QIIRVPVDAAGTVTLETTIYKPDGAGPFPMIVFNHGKIPGDPRSQERSDPLPFAREFVRR
CEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHC
GYVVVAPNRQGFGHSDGVYQQDGCDVEKNGIGQAGDVAATIDFMSKQPYVDATHIVVAGT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEEEEEEEC
SHGGLATMAYGTEAAPGVRALINFSGGLRQDACSDWQGNLTRAFGAYGEKTRVPSLWMYG
CCCCEEEEECCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEC
DNDSVWNAPLVAGMYAAYGAHGASAKMVDFGSYKNDAHRLVGDRDGVHVWWPAVEAFLAR
CCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEHHHHHHHHHH
VGMPTGVQYRVADPSMPKASGFAAVDAVDSVPFVDEAGRNGYRNFLHQYPSRAFAVSDTG
CCCCCCCEEEECCCCCCCCCCCEEEHHHCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCC
AWSWAEGGDDPMSVAVANCQKQSSAPCRLYAVNNSVVWGEQSSQTAEGGAGAGSGAGGVD
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC
GRRDVASRE
CCCHHCCCC
>Mature Secondary Structure
MVFSKVLTKCAVICAAATCMVTLAHADPLTDTQAGPLTRARVPRIALDDDVYLPTAGLNE
CCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCEEEECCCEEECCCCCCC
QIIRVPVDAAGTVTLETTIYKPDGAGPFPMIVFNHGKIPGDPRSQERSDPLPFAREFVRR
CEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHC
GYVVVAPNRQGFGHSDGVYQQDGCDVEKNGIGQAGDVAATIDFMSKQPYVDATHIVVAGT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEEEEEEEC
SHGGLATMAYGTEAAPGVRALINFSGGLRQDACSDWQGNLTRAFGAYGEKTRVPSLWMYG
CCCCEEEEECCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEC
DNDSVWNAPLVAGMYAAYGAHGASAKMVDFGSYKNDAHRLVGDRDGVHVWWPAVEAFLAR
CCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEHHHHHHHHHH
VGMPTGVQYRVADPSMPKASGFAAVDAVDSVPFVDEAGRNGYRNFLHQYPSRAFAVSDTG
CCCCCCCEEEECCCCCCCCCCCEEEHHHCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCC
AWSWAEGGDDPMSVAVANCQKQSSAPCRLYAVNNSVVWGEQSSQTAEGGAGAGSGAGGVD
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC
GRRDVASRE
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA