Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ywhH [H]

Identifier: 91781574

GI number: 91781574

Start: 224150

End: 224671

Strand: Reverse

Name: ywhH [H]

Synonym: Bxe_A4271

Alternate gene names: 91781574

Gene position: 224671-224150 (Counterclockwise)

Preceding gene: 91781575

Following gene: 91781573

Centisome position: 4.59

GC content: 68.77

Gene sequence:

>522_bases
ATGACGGACCACGCTTCTCCCGAAACCGACGATCTCACCGCGCTGCCGGACTCGGCACGCCGCGTCGCGCTGCTGTTGCG
CGAACGCGGTCACGCGGGCCGGATCGTGATGCTGCCGGAAACCGGCAAGACCTCCGCCGAAGCCGCCGCGGGACTCGGCT
GCTCGGTCGCGCAGATCGCCAAGTCGATCCTGTTTCGCCGCCGCGAAGACGACGCACCGGTGCTGGTGGTCGCGAGCGGC
GCGAATCGCGTCGACGAAAAGAAGGTCGCCGCGCAGGTCGGCGAAATCGGCCGTGCGGACGCGAAGTTCGTCCGCGAAAA
AACCGGCTATGCGATCGGCGGCGTCTGTCCGATCGGTCACGCCACCGAACCGGTCACGCTGATCGACGCGGATCTGCTCG
AACTCGACAGCCTGTGGGCCGCCGCGGGCCATCCGCATGCGGTGTTCAACCTGACGGCACAGGAGCTGATCGCGCTGACG
GGCGCGCCGGTGGTCGACGTGGCGCTGCGCGAAACGGCGTGA

Upstream 100 bases:

>100_bases
AGCGCGCAGCGAAGCAGCGGCGAACTGCGTCTGACGCCGGCCCGGCGCATGCGCCCGGCACTCATGCCAACTGTCATGCC
AACACTCAGGACCTGAAACG

Downstream 100 bases:

>100_bases
CGCGATGACGGTAACGATGACGACGATGACAGCAGGCCTCGATAACGAAGACGACCGCGCCGTGCCCTCGCCTTGCATCA
ACGTGTGCAGGATGGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTDHASPETDDLTALPDSARRVALLLRERGHAGRIVMLPETGKTSAEAAAGLGCSVAQIAKSILFRRREDDAPVLVVASG
ANRVDEKKVAAQVGEIGRADAKFVREKTGYAIGGVCPIGHATEPVTLIDADLLELDSLWAAAGHPHAVFNLTAQELIALT
GAPVVDVALRETA

Sequences:

>Translated_173_residues
MTDHASPETDDLTALPDSARRVALLLRERGHAGRIVMLPETGKTSAEAAAGLGCSVAQIAKSILFRRREDDAPVLVVASG
ANRVDEKKVAAQVGEIGRADAKFVREKTGYAIGGVCPIGHATEPVTLIDADLLELDSLWAAAGHPHAVFNLTAQELIALT
GAPVVDVALRETA
>Mature_172_residues
TDHASPETDDLTALPDSARRVALLLRERGHAGRIVMLPETGKTSAEAAAGLGCSVAQIAKSILFRRREDDAPVLVVASGA
NRVDEKKVAAQVGEIGRADAKFVREKTGYAIGGVCPIGHATEPVTLIDADLLELDSLWAAAGHPHAVFNLTAQELIALTG
APVVDVALRETA

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 18108; Mature: 17977

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHASPETDDLTALPDSARRVALLLRERGHAGRIVMLPETGKTSAEAAAGLGCSVAQIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCHHHHH
KSILFRRREDDAPVLVVASGANRVDEKKVAAQVGEIGRADAKFVREKTGYAIGGVCPIGH
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCC
ATEPVTLIDADLLELDSLWAAAGHPHAVFNLTAQELIALTGAPVVDVALRETA
CCCCEEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEHEECCCC
>Mature Secondary Structure 
TDHASPETDDLTALPDSARRVALLLRERGHAGRIVMLPETGKTSAEAAAGLGCSVAQIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCHHHHH
KSILFRRREDDAPVLVVASGANRVDEKKVAAQVGEIGRADAKFVREKTGYAIGGVCPIGH
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCC
ATEPVTLIDADLLELDSLWAAAGHPHAVFNLTAQELIALTGAPVVDVALRETA
CCCCEEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]