Click here to switch to the map view.

The map label for this gene is dapA [H]

Identifier: 91781541

GI number: 91781541

Start: 182823

End: 183716

Strand: Reverse

Name: dapA [H]

Synonym: Bxe_A4304

Alternate gene names: 91781541

Gene position: 183716-182823 (Counterclockwise)

Preceding gene: 91781542

Following gene: 91781540

Centisome position: 3.75

GC content: 63.31

Gene sequence:

>894_bases
ATGAAAAGCACAGAATTTCGCGGCATCATTTCGTACCCCGTAACACCGTTCGATCTGCACGACGGCAGCGTTGATGTCCC
GACGCTGAACCGGTTGATCGATCGTCTGGTCGACAGCGGCTCGCACGGCATCGCACCGCTCGGCAGCACGGGCGAAAGCG
CCTATCTCAGCGACGACGAATGGGACACGGTGGCCGAGGCATCGGTCAGACGCGTGGCGAAGCGCCTGCCGGTCATTGTC
GGCATTTCCGACCTGACGACCCGCAACGCGGTGCGCCGTGCGAAGTTCGCCGAATCAGTGGGCGCCGATGCGGTGATGGT
GCTGCCGGTGTCTTACTGGAAGCTCAACGAAGCGGAAATCTTCCGCCATTACGCGACGATCGCCGAGGCGATCAGCGTGC
CGATCATGGTGTACAACAATCCGGCGACGAGCGGCATCGACATGCAGCCCGAACTGATCGTGAAGCTCGCGAGGGAGATC
GACAACGTCACGATGATCAAGGAAAGCACCGGCGACATTCAGCGGATGCACCGGATTGCGCAGCTGTCGGACGGGCGCGT
GCCGTTTTTCAACGGCAGTAATCCGCTGGCGCTCGGAGCCTTCGCGGCAGGGGCGGCCGGGTGGTGCACGGCGGCGCCGA
ACCTCGTGCCGCAATGGCCAGTCAAGCTTTATGAGGCTTGTGAGAAGGGTGATATGGAGCTTGCGCGAGCGGTTTTTTAT
CGCTTGCTGCCGTTCCTGCAGTGCATCATGAAGGGCGGCTTGCCGACGACGGTGAAGGCCGGGCTTGCGTTGCGAGGGTT
TTCGGTGGGCGCGCCGCGTAGGCCGCTTCAGCCGCTTGCGGAGCCGGCGGTGCGTGAGTTGGCGGCAGTGCTGGGGGGGC
TTGAGGGCGGCTGA

Upstream 100 bases:

>100_bases
GACGTTCGCCTACTTCGCCCGCCGCGCGCTGCGCAGTCCGATGCACCGCGATTGTCTCGCCTGACGCCTCTTACCTATCG
ATCCAAGGAGCTGCATCCCT

Downstream 100 bases:

>100_bases
GGCGGCCGGGCGGGGCTTGGAGTTTTGGGGGATGCGTATTTGCTACGGGGGCTTTCCGGGGTGTGGGGGGAAACCGAATT
CGCTTCTTGCGCGGGTGGAA

Product: putative dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKSTEFRGIISYPVTPFDLHDGSVDVPTLNRLIDRLVDSGSHGIAPLGSTGESAYLSDDEWDTVAEASVRRVAKRLPVIV
GISDLTTRNAVRRAKFAESVGADAVMVLPVSYWKLNEAEIFRHYATIAEAISVPIMVYNNPATSGIDMQPELIVKLAREI
DNVTMIKESTGDIQRMHRIAQLSDGRVPFFNGSNPLALGAFAAGAAGWCTAAPNLVPQWPVKLYEACEKGDMELARAVFY
RLLPFLQCIMKGGLPTTVKAGLALRGFSVGAPRRPLQPLAEPAVRELAAVLGGLEGG

Sequences:

>Translated_297_residues
MKSTEFRGIISYPVTPFDLHDGSVDVPTLNRLIDRLVDSGSHGIAPLGSTGESAYLSDDEWDTVAEASVRRVAKRLPVIV
GISDLTTRNAVRRAKFAESVGADAVMVLPVSYWKLNEAEIFRHYATIAEAISVPIMVYNNPATSGIDMQPELIVKLAREI
DNVTMIKESTGDIQRMHRIAQLSDGRVPFFNGSNPLALGAFAAGAAGWCTAAPNLVPQWPVKLYEACEKGDMELARAVFY
RLLPFLQCIMKGGLPTTVKAGLALRGFSVGAPRRPLQPLAEPAVRELAAVLGGLEGG
>Mature_297_residues
MKSTEFRGIISYPVTPFDLHDGSVDVPTLNRLIDRLVDSGSHGIAPLGSTGESAYLSDDEWDTVAEASVRRVAKRLPVIV
GISDLTTRNAVRRAKFAESVGADAVMVLPVSYWKLNEAEIFRHYATIAEAISVPIMVYNNPATSGIDMQPELIVKLAREI
DNVTMIKESTGDIQRMHRIAQLSDGRVPFFNGSNPLALGAFAAGAAGWCTAAPNLVPQWPVKLYEACEKGDMELARAVFY
RLLPFLQCIMKGGLPTTVKAGLALRGFSVGAPRRPLQPLAEPAVRELAAVLGGLEGG

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=289, Percent_Identity=26.9896193771626, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI13540533, Length=281, Percent_Identity=25.9786476868327, Blast_Score=78, Evalue=7e-15,
Organism=Escherichia coli, GI1786463, Length=286, Percent_Identity=30.0699300699301, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87082415, Length=242, Percent_Identity=29.7520661157025, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1788823, Length=287, Percent_Identity=27.8745644599303, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1789620, Length=290, Percent_Identity=26.8965517241379, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32029; Mature: 32029

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTEFRGIISYPVTPFDLHDGSVDVPTLNRLIDRLVDSGSHGIAPLGSTGESAYLSDDE
CCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
WDTVAEASVRRVAKRLPVIVGISDLTTRNAVRRAKFAESVGADAVMVLPVSYWKLNEAEI
HHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHHHH
FRHYATIAEAISVPIMVYNNPATSGIDMQPELIVKLAREIDNVTMIKESTGDIQRMHRIA
HHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
QLSDGRVPFFNGSNPLALGAFAAGAAGWCTAAPNLVPQWPVKLYEACEKGDMELARAVFY
HHCCCCCCEECCCCCCEEHHHHCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
RLLPFLQCIMKGGLPTTVKAGLALRGFSVGAPRRPLQPLAEPAVRELAAVLGGLEGG
HHHHHHHHHHHCCCCHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSTEFRGIISYPVTPFDLHDGSVDVPTLNRLIDRLVDSGSHGIAPLGSTGESAYLSDDE
CCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
WDTVAEASVRRVAKRLPVIVGISDLTTRNAVRRAKFAESVGADAVMVLPVSYWKLNEAEI
HHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHHHH
FRHYATIAEAISVPIMVYNNPATSGIDMQPELIVKLAREIDNVTMIKESTGDIQRMHRIA
HHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
QLSDGRVPFFNGSNPLALGAFAAGAAGWCTAAPNLVPQWPVKLYEACEKGDMELARAVFY
HHCCCCCCEECCCCCCEEHHHHCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
RLLPFLQCIMKGGLPTTVKAGLALRGFSVGAPRRPLQPLAEPAVRELAAVLGGLEGG
HHHHHHHHHHHCCCCHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA