Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is coxS [H]

Identifier: 91781495

GI number: 91781495

Start: 133809

End: 134339

Strand: Reverse

Name: coxS [H]

Synonym: Bxe_A4351

Alternate gene names: 91781495

Gene position: 134339-133809 (Counterclockwise)

Preceding gene: 91781497

Following gene: 91781494

Centisome position: 2.74

GC content: 64.41

Gene sequence:

>531_bases
ATGGCGATCAGCATCAGTCTGACGGTGAACGGCGCGCCCATCAGCGCCTCAATCGACCCTGGCACCCTGCTAGTCCAGTT
CCTTCGCGAGCAACTGCGTCTCACCGGCACACACGTCGGCTGCGATACAGCCCAATGCGGCGCGTGCACGGTCCATCTGA
ACGGACGCGCGATCAAATCCTGCAACATCCTCGCGGTGCAGGCGGACGGCGCGAAAATCACCACCATCGAGGGGCTCGCC
AAAGACGGCACACTGCATCCCATGCAGGCAGCCTTCAAACATTGCCACGGCCTGCAATGCGGCTTCTGTACGCCCGGCAT
GGTGATGAGCGCAGTCTCGCTCGTCCAGCGCCAGCCGGATCTCACCGGCGACGACGTACGCGCCCAGCTCGACGGCAATC
TGTGCCGCTGTACGGGCTATCACAACATCGTCAAAGCAGTGCTCGAAGGCGCCGAAGGCATGAAGTCCACCGGCACGGCC
AACGCCGCCGCGAATGCCACCGCGCAGGCCAACGCACCGGCCACCGCCTGA

Upstream 100 bases:

>100_bases
CCCCGCAACACCCCAACCGGCCCCACGAAAAAAAACAGGCAACCGAAGGCAAACAACAACCGCAAAAAGGTCCGGTCTCA
CCCCATAAGGAGACAACTTC

Downstream 100 bases:

>100_bases
GGAGCCGACGATGAACGCACCCGAAACTCACCTGATCGGCGCCTCCGTCGAACGTAAGGAAGACTATCGTTTCCTGACCG
GCAACGGCCAGTACACCGAC

Product: putative carbon-monoxide dehydrogenase, small subunit (CoxS)

Products: NA

Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLA
KDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTA
NAAANATAQANAPATA

Sequences:

>Translated_176_residues
MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLA
KDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTA
NAAANATAQANAPATA
>Mature_175_residues
AISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKSCNILAVQADGAKITTIEGLAK
DGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPDLTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTAN
AAANATAQANAPATA

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=150, Percent_Identity=41.3333333333333, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI91823271, Length=150, Percent_Identity=40, Blast_Score=94, Evalue=9e-20,
Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=43.1952662721894, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1789232, Length=149, Percent_Identity=46.3087248322148, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=40.3846153846154, Blast_Score=122, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=37.6623376623377, Blast_Score=114, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=36.3636363636364, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI17737937, Length=161, Percent_Identity=42.8571428571429, Blast_Score=111, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=38.125, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=38.125, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=35.0649350649351, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=35.0649350649351, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=34.6153846153846, Blast_Score=80, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 18059; Mature: 17928

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKS
CEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECC
CNILAVQADGAKITTIEGLAKDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPD
CEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
LTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTANAAANATAQANAPATA
CCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AISISLTVNGAPISASIDPGTLLVQFLREQLRLTGTHVGCDTAQCGACTVHLNGRAIKS
EEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECC
CNILAVQADGAKITTIEGLAKDGTLHPMQAAFKHCHGLQCGFCTPGMVMSAVSLVQRQPD
CEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
LTGDDVRAQLDGNLCRCTGYHNIVKAVLEGAEGMKSTGTANAAANATAQANAPATA
CCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 2818128; 10430865; 12475995 [H]