| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is coxL1 [H]
Identifier: 91781494
GI number: 91781494
Start: 131417
End: 133798
Strand: Reverse
Name: coxL1 [H]
Synonym: Bxe_A4352
Alternate gene names: 91781494
Gene position: 133798-131417 (Counterclockwise)
Preceding gene: 91781495
Following gene: 91781493
Centisome position: 2.73
GC content: 65.07
Gene sequence:
>2382_bases ATGAACGCACCCGAAACTCACCTGATCGGCGCCTCCGTCGAACGTAAGGAAGACTATCGTTTCCTGACCGGCAACGGCCA GTACACCGACGACATCGTCCTGCCCCAGCAAACCTACGCGGTATTCCTGCGCTCGCCGTACGCGCACGCGAAGATCAACA CCATCGACACCACCGCGGCCAAACAGTCGCCCGGCGTGGTGGCGATCTTCACCGGCGCGGACATGGCCGCTGACAACGTC GGCGGCCTGCCGTGCGGCTGGCTGATCCACAGCACCGACGGCAAGCCGATGAACGAGCCGCCGCATCCGGTCATCGCGCA TACGAAAGTGCGCCACGTCGGCGACCAGGTCGCGCTCGTCATCGCCGATTCGATCAAGGCCGCCAAAGACGCCGCCGAAC TGATCGAAGTCGACTACGACGTGCTGCCGGCGGTAGTCGACACCGCGCATGCAGCCGACGCCGGCCAGCCCGCCGTTCAC GACGAAGTGCCCGACAACGTCTGCTACAACTGGGGCCACGGCGACAAAGCCGCCACCGACGCCGCCTTCGCCAAAGCCGC GCACGTCACCACGCTCGACATCGTCAACAACCGGCTGATTCCGAACGCGATCGAACCGCGCGCGGTCAACGCGAGCTATT CGGCGCAGGACGACAGCTACACGCTCTACGTCGCGAACCAGAATCCGCATGTGGAGCGCCTGCTGATGGCCGCCTTCGTG CTGTCGCTGCCGGAATCGAAACTGCGCGTGATCGCGCCGGACGTGGGCGGCGGCTTCGGATCGAAGATCTTCCTGTACGC CGAAGACGTCGCGCTGACCTGGGCGTCGAAGAAAATCCGCCGTCCGGTGAAGTGGACGGCCGAGCGCTCGGAAGCGTTCG TCTCCGACGCGCACGGCCGCGATCACGTGACCAAAGCCGAACTGGCACTGGACGCGGACGGCAGGTTCCTCGCCATGCGC ATCCATACAACAGCCAACATGGGCGCGTATCTGTCCACCTTCGCCTCCAGCGTGCCGACCATTCTGTACGCCACGCTGCT CGCCGGCCAGTACGCCACGCCCGCGATCTACGCGGAAGTGAAAGCGGTCTTCACCAACACCGTTCCCGTCGACGCCTATC GCGGCGCGGGCCGCCCCGAAGCGACGTATGTCGTGGAGCGCCTCGTCGAAACGGCCGCGCGCGAACTGAAGCTCGATCCG GCCGAGATCCGCCGCCGCAATTTCATTCGCGAGTTTCCGTACGCGACGCCGGTCGGCCTCACCTACGACACCGGCGACTA CGAGACGATCCTCGCGCGTTCGCTCGAACTCGCGGACGTCAAAGGCTTCGCAGCGCGCAGACAGGAATCCGAAAAGAACG GCAAGCTGCGCGGCCTCGGCTATTCGTGCTACATCGAAGCCTGCGGTCTCGCGCCTTCGAATATCGCGGGCGCGTTGGGC GCGCGGGCCGGCCTGTTCGAAGTCGGTCAGATTCGCGTGCATCCCACCGGATCGGTCACCGTGTTCACGGGCTCGCACAG TCACGGCCAGGGACATGAGACAACCTTCGCGCAAGTGGTGGCCGAGCGGCTCGGCATTGCGCTGGAAAGCGTCGAGATCG TCCACGGCGACACCGGCCGCATTCCGTTCGGCATGGGCACGTATGGCTCGCGTTCCATCGCGGTCGGCGGCTCGGCGATC ATGAAAGCGCTCGACAAGATCGAAACCAAGGCGAAGAAGATCGCCGCGCACCTGCTCGAAGCCGCTGCGGAAGACATCGA GTTCAAGGACGGCGTATTCCGCGTCGCGGGCACCGATCGCACCAAGGCGTTTGCCGAGATTTCGCTCGCCGCGTACGTGC CGCACAACTATCCGCTCGACGTGCTCGAACCCGGCCTCGAAGAAAGCGCGTTCTACGATCCGACCAACTTCACCTATCCA TCCGGCGCGTACATCTGCGAGATCGAAGTCGACCCGGACACGGGCGTGTGCCGGATCCAGCAGTTCACCGCGGTCGACGA TTTCGGCAACGTGATCAACCCGATGATCGTCGAAGGCCAGGTGCATGGCGGGCTCGCTCAGGGCATCGGCCAGGCGATGC TGGAGCGCTGCGTATACGACAACGAGAGCGGCCAGTTGCTGTCCGGCTCGTACATGGATTACGCGATGCCGCATGCGTCC GATCTGCCGGACTTCACCGTCGAAACCGCGAAGGGCACGCCGTGCACGCACAATCCGCTCGGCGTGAAAGGCTGCGGCGA AGCGGGCGCGATCGGCTCGCCGCCGGCGGTGATCAACGCGATCCTCGACGCGCTCGCGCCGCTCGGCGTGACCGACCTGC AAATGCCGGCCACGCCGCATCGCGTGTGGTCCGCGATTCACGCTGCCAAACAAGCCCATTGA
Upstream 100 bases:
>100_bases CTCGAAGGCGCCGAAGGCATGAAGTCCACCGGCACGGCCAACGCCGCCGCGAATGCCACCGCGCAGGCCAACGCACCGGC CACCGCCTGAGGAGCCGACG
Downstream 100 bases:
>100_bases GATCCTGAGCGGAGCATTCGACATGTATTCATTCGAGTATCAACGCGCGACGGATCCGAAAGCGGCCGCCGCCAGCCTCA CCGCCGACAGCGACGCGAAG
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MNAPETHLIGASVERKEDYRFLTGNGQYTDDIVLPQQTYAVFLRSPYAHAKINTIDTTAAKQSPGVVAIFTGADMAADNV GGLPCGWLIHSTDGKPMNEPPHPVIAHTKVRHVGDQVALVIADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVH DEVPDNVCYNWGHGDKAATDAAFAKAAHVTTLDIVNNRLIPNAIEPRAVNASYSAQDDSYTLYVANQNPHVERLLMAAFV LSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFVSDAHGRDHVTKAELALDADGRFLAMR IHTTANMGAYLSTFASSVPTILYATLLAGQYATPAIYAEVKAVFTNTVPVDAYRGAGRPEATYVVERLVETAARELKLDP AEIRRRNFIREFPYATPVGLTYDTGDYETILARSLELADVKGFAARRQESEKNGKLRGLGYSCYIEACGLAPSNIAGALG ARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVAERLGIALESVEIVHGDTGRIPFGMGTYGSRSIAVGGSAI MKALDKIETKAKKIAAHLLEAAAEDIEFKDGVFRVAGTDRTKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPTNFTYP SGAYICEIEVDPDTGVCRIQQFTAVDDFGNVINPMIVEGQVHGGLAQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHAS DLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAILDALAPLGVTDLQMPATPHRVWSAIHAAKQAH
Sequences:
>Translated_793_residues MNAPETHLIGASVERKEDYRFLTGNGQYTDDIVLPQQTYAVFLRSPYAHAKINTIDTTAAKQSPGVVAIFTGADMAADNV GGLPCGWLIHSTDGKPMNEPPHPVIAHTKVRHVGDQVALVIADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVH DEVPDNVCYNWGHGDKAATDAAFAKAAHVTTLDIVNNRLIPNAIEPRAVNASYSAQDDSYTLYVANQNPHVERLLMAAFV LSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFVSDAHGRDHVTKAELALDADGRFLAMR IHTTANMGAYLSTFASSVPTILYATLLAGQYATPAIYAEVKAVFTNTVPVDAYRGAGRPEATYVVERLVETAARELKLDP AEIRRRNFIREFPYATPVGLTYDTGDYETILARSLELADVKGFAARRQESEKNGKLRGLGYSCYIEACGLAPSNIAGALG ARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVAERLGIALESVEIVHGDTGRIPFGMGTYGSRSIAVGGSAI MKALDKIETKAKKIAAHLLEAAAEDIEFKDGVFRVAGTDRTKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPTNFTYP SGAYICEIEVDPDTGVCRIQQFTAVDDFGNVINPMIVEGQVHGGLAQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHAS DLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAILDALAPLGVTDLQMPATPHRVWSAIHAAKQAH >Mature_793_residues MNAPETHLIGASVERKEDYRFLTGNGQYTDDIVLPQQTYAVFLRSPYAHAKINTIDTTAAKQSPGVVAIFTGADMAADNV GGLPCGWLIHSTDGKPMNEPPHPVIAHTKVRHVGDQVALVIADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVH DEVPDNVCYNWGHGDKAATDAAFAKAAHVTTLDIVNNRLIPNAIEPRAVNASYSAQDDSYTLYVANQNPHVERLLMAAFV LSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFVSDAHGRDHVTKAELALDADGRFLAMR IHTTANMGAYLSTFASSVPTILYATLLAGQYATPAIYAEVKAVFTNTVPVDAYRGAGRPEATYVVERLVETAARELKLDP AEIRRRNFIREFPYATPVGLTYDTGDYETILARSLELADVKGFAARRQESEKNGKLRGLGYSCYIEACGLAPSNIAGALG ARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVAERLGIALESVEIVHGDTGRIPFGMGTYGSRSIAVGGSAI MKALDKIETKAKKIAAHLLEAAAEDIEFKDGVFRVAGTDRTKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPTNFTYP SGAYICEIEVDPDTGVCRIQQFTAVDDFGNVINPMIVEGQVHGGLAQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHAS DLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAILDALAPLGVTDLQMPATPHRVWSAIHAAKQAH
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=795, Percent_Identity=25.2830188679245, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI91823271, Length=798, Percent_Identity=25.187969924812, Blast_Score=139, Evalue=9e-33, Organism=Escherichia coli, GI1789230, Length=788, Percent_Identity=29.0609137055838, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI1789246, Length=832, Percent_Identity=26.9230769230769, Blast_Score=214, Evalue=2e-56, Organism=Escherichia coli, GI1786478, Length=737, Percent_Identity=24.2876526458616, Blast_Score=140, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17540638, Length=830, Percent_Identity=24.4578313253012, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17539860, Length=770, Percent_Identity=24.6753246753247, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI32566215, Length=768, Percent_Identity=23.5677083333333, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI17737937, Length=760, Percent_Identity=25.9210526315789, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI24647193, Length=819, Percent_Identity=22.2222222222222, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24647197, Length=565, Percent_Identity=24.9557522123894, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647195, Length=565, Percent_Identity=24.9557522123894, Blast_Score=95, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84879; Mature: 84879
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPETHLIGASVERKEDYRFLTGNGQYTDDIVLPQQTYAVFLRSPYAHAKINTIDTTAA CCCCCCEEECCCCCCCCCCEEEECCCCCCCCEECCCHHEEEEEECCCCCEEEEEEECCCC KQSPGVVAIFTGADMAADNVGGLPCGWLIHSTDGKPMNEPPHPVIAHTKVRHVGDQVALV CCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECHHHHHCCCEEEEE IADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVHDEVPDNVCYNWGHGDKAATD EEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHH AAFAKAAHVTTLDIVNNRLIPNAIEPRAVNASYSAQDDSYTLYVANQNPHVERLLMAAFV HHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH LSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFVSDAHGR HHCCCCCEEEEECCCCCCCCCEEEEEEECEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCC DHVTKAELALDADGRFLAMRIHTTANMGAYLSTFASSVPTILYATLLAGQYATPAIYAEV CCCEEEHEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KAVFTNTVPVDAYRGAGRPEATYVVERLVETAARELKLDPAEIRRRNFIREFPYATPVGL HHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCE TYDTGDYETILARSLELADVKGFAARRQESEKNGKLRGLGYSCYIEACGLAPSNIAGALG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHH ARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVAERLGIALESVEIVHGDTGR CCCCCEEECEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCC IPFGMGTYGSRSIAVGGSAIMKALDKIETKAKKIAAHLLEAAAEDIEFKDGVFRVAGTDR CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPTNFTYPSGAYICEIEVDPDTGVCRIQ HHHHHEEEEEEECCCCCCHHHHCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEE QFTAVDDFGNVINPMIVEGQVHGGLAQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHAS EEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCC DLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAILDALAPLGVTDLQMPATPH CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH RVWSAIHAAKQAH HHHHHHHHHHHCC >Mature Secondary Structure MNAPETHLIGASVERKEDYRFLTGNGQYTDDIVLPQQTYAVFLRSPYAHAKINTIDTTAA CCCCCCEEECCCCCCCCCCEEEECCCCCCCCEECCCHHEEEEEECCCCCEEEEEEECCCC KQSPGVVAIFTGADMAADNVGGLPCGWLIHSTDGKPMNEPPHPVIAHTKVRHVGDQVALV CCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECHHHHHCCCEEEEE IADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVHDEVPDNVCYNWGHGDKAATD EEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHH AAFAKAAHVTTLDIVNNRLIPNAIEPRAVNASYSAQDDSYTLYVANQNPHVERLLMAAFV HHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH LSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFVSDAHGR HHCCCCCEEEEECCCCCCCCCEEEEEEECEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCC DHVTKAELALDADGRFLAMRIHTTANMGAYLSTFASSVPTILYATLLAGQYATPAIYAEV CCCEEEHEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KAVFTNTVPVDAYRGAGRPEATYVVERLVETAARELKLDPAEIRRRNFIREFPYATPVGL HHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCE TYDTGDYETILARSLELADVKGFAARRQESEKNGKLRGLGYSCYIEACGLAPSNIAGALG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHH ARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVAERLGIALESVEIVHGDTGR CCCCCEEECEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCC IPFGMGTYGSRSIAVGGSAIMKALDKIETKAKKIAAHLLEAAAEDIEFKDGVFRVAGTDR CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPTNFTYPSGAYICEIEVDPDTGVCRIQ HHHHHEEEEEEECCCCCCHHHHCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEE QFTAVDDFGNVINPMIVEGQVHGGLAQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHAS EEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCC DLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAILDALAPLGVTDLQMPATPH CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH RVWSAIHAAKQAH HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]