| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cutM [H]
Identifier: 91781493
GI number: 91781493
Start: 130597
End: 131394
Strand: Reverse
Name: cutM [H]
Synonym: Bxe_A4353
Alternate gene names: 91781493
Gene position: 131394-130597 (Counterclockwise)
Preceding gene: 91781494
Following gene: 91781492
Centisome position: 2.68
GC content: 66.79
Gene sequence:
>798_bases ATGTATTCATTCGAGTATCAACGCGCGACGGATCCGAAAGCGGCCGCCGCCAGCCTCACCGCCGACAGCGACGCGAAGTT TCTGGCCGGCGGCCAAAGCCTTTTGCCCACCATGCGGCTGCGTCTCGCGCAGCCGTCACAACTGATCGACGTGACGCGCA TTCCCGCGCTGAAGTCGATCACGGTCGACGGAAAAACGGTGACGATCGGCGCCGCCGTGTGTCATGCCGATGTCGCGGAT CACGCGGAACTGCGGCGCGTATCGCCGGCGCTTGCGGATCTCGCCGCGCATATCGGCGATCGCCAGGTGCGCGCGCTCGG CACGATCGGCGGCTCGCTCGCCAACAACGACCCGGCCGCCTGTTATCCGGCCGCGGCGATGGCGCTGGACGCGACTATCG TCACGGACCGGCGGCGCATTACGTCGGGCGATTTTTTCGTCGGCATGTATGAGACGGCGTTGGCGCCCGACGAACTGATC GTCGCCGTTGAGTTTCCGGTGCCGGAGCGCGCCGCGTACGAGAAATTCCGCAATCCGGCTTCGCACTTCGCGTTGGTCGG CGTGTTCGTCGCGAAGTTCGCGAGCGGCGTGCGCGTTGCGGTGACGGGCGCGGCGGCGTCGGTGTTTCGTGTACCGGAGC TGGAAAGCGCGTTGTCGGCGAACTTCGCGCCCGAAGCCGCCCGCGCGGTGACGGTGTCGGGCGCCGACCTGAACACGGAC ATGCACGCGAGCGCCGAATATCGCGCGCATCTGATTCCGGTACTGGCGGCACGCGCGGTGACGAAGGCGAACGCTTAG
Upstream 100 bases:
>100_bases GGCGTGACCGACCTGCAAATGCCGGCCACGCCGCATCGCGTGTGGTCCGCGATTCACGCTGCCAAACAAGCCCATTGAGA TCCTGAGCGGAGCATTCGAC
Downstream 100 bases:
>100_bases CTTTTCCTCGCCGTTCGCGGCTGATGCGACCCGTGCCCGCGCGGGCACGTCAGCCGCCTTCGCTCACGTGCGCCGCCGAC GCCTCGCTTCATTGGCATCG
Product: putative carbon monoxide dehydrogenase, medium subunit (CoxM)
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MYSFEYQRATDPKAAAASLTADSDAKFLAGGQSLLPTMRLRLAQPSQLIDVTRIPALKSITVDGKTVTIGAAVCHADVAD HAELRRVSPALADLAAHIGDRQVRALGTIGGSLANNDPAACYPAAAMALDATIVTDRRRITSGDFFVGMYETALAPDELI VAVEFPVPERAAYEKFRNPASHFALVGVFVAKFASGVRVAVTGAAASVFRVPELESALSANFAPEAARAVTVSGADLNTD MHASAEYRAHLIPVLAARAVTKANA
Sequences:
>Translated_265_residues MYSFEYQRATDPKAAAASLTADSDAKFLAGGQSLLPTMRLRLAQPSQLIDVTRIPALKSITVDGKTVTIGAAVCHADVAD HAELRRVSPALADLAAHIGDRQVRALGTIGGSLANNDPAACYPAAAMALDATIVTDRRRITSGDFFVGMYETALAPDELI VAVEFPVPERAAYEKFRNPASHFALVGVFVAKFASGVRVAVTGAAASVFRVPELESALSANFAPEAARAVTVSGADLNTD MHASAEYRAHLIPVLAARAVTKANA >Mature_265_residues MYSFEYQRATDPKAAAASLTADSDAKFLAGGQSLLPTMRLRLAQPSQLIDVTRIPALKSITVDGKTVTIGAAVCHADVAD HAELRRVSPALADLAAHIGDRQVRALGTIGGSLANNDPAACYPAAAMALDATIVTDRRRITSGDFFVGMYETALAPDELI VAVEFPVPERAAYEKFRNPASHFALVGVFVAKFASGVRVAVTGAAASVFRVPELESALSANFAPEAARAVTVSGADLNTD MHASAEYRAHLIPVLAARAVTKANA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786479, Length=277, Percent_Identity=31.7689530685921, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1789231, Length=286, Percent_Identity=25.5244755244755, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 27747; Mature: 27747
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSFEYQRATDPKAAAASLTADSDAKFLAGGQSLLPTMRLRLAQPSQLIDVTRIPALKSI CCCCCCCCCCCCHHHHEECCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEE TVDGKTVTIGAAVCHADVADHAELRRVSPALADLAAHIGDRQVRALGTIGGSLANNDPAA EECCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC CYPAAAMALDATIVTDRRRITSGDFFVGMYETALAPDELIVAVEFPVPERAAYEKFRNPA HHHHHHHHHHHEEEECCCEECCCCEEEEEHHHHCCCCCEEEEEECCCCCHHHHHHHCCHH SHFALVGVFVAKFASGVRVAVTGAAASVFRVPELESALSANFAPEAARAVTVSGADLNTD HHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCC MHASAEYRAHLIPVLAARAVTKANA CCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYSFEYQRATDPKAAAASLTADSDAKFLAGGQSLLPTMRLRLAQPSQLIDVTRIPALKSI CCCCCCCCCCCCHHHHEECCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEE TVDGKTVTIGAAVCHADVADHAELRRVSPALADLAAHIGDRQVRALGTIGGSLANNDPAA EECCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC CYPAAAMALDATIVTDRRRITSGDFFVGMYETALAPDELIVAVEFPVPERAAYEKFRNPA HHHHHHHHHHHEEEECCCEECCCCEEEEEHHHHCCCCCEEEEEECCCCCHHHHHHHCCHH SHFALVGVFVAKFASGVRVAVTGAAASVFRVPELESALSANFAPEAARAVTVSGADLNTD HHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCC MHASAEYRAHLIPVLAARAVTKANA CCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]