Click here to switch to the map view.

The map label for this gene is regB [H]

Identifier: 91781463

GI number: 91781463

Start: 97065

End: 98375

Strand: Direct

Name: regB [H]

Synonym: Bxe_A4383

Alternate gene names: 91781463

Gene position: 97065-98375 (Clockwise)

Preceding gene: 91781455

Following gene: 91781464

Centisome position: 1.98

GC content: 62.93

Gene sequence:

>1311_bases
ATGCATCGTATAACCAACACTGGCCGCGTCAATCTCGGGCATCTGTTCTGGCTGCGCAGTCTCGCGATCATTGGCCAGCT
GATGACGATTGCGTTCGTGCAGACCTTCATCGGCGTGCAGTTGCCGTTGCCTGCCATGCTGCTCGTGATCGCGCTCGAAG
TGATCTTCAATGGACTCACATGGTGGCGCGTTTCGCAGCAGCGGCCCGAATCCAACATGGAGCTGTTCGGCCAGATCTGG
GTCGATCTGGGCGCGTTGTCCGCGCTGCTGTTTCTCTCGGGCGGCACCACCAATCCTTTCGTTTCGCTCTACCTGCCCTC
TCTCGCGATTGCCGCGGCGGTGCTGCCGTGGCATCTGATGGCCTGGCTCGCGGCGTTCGCCGTGGCCTGCTATGCCGTGC
TGGGTTTCGATTCGGTACCGCTGAATCTCGACAATCCCGCGAACCTGTTCGACTACTATCGCGCGGGCATGTGGGTGAAC
TTCATGGTCAGCGTCGGCCTCATTGCATGGTTCGTTGCGCGCATGTCGGGAGCGCTGCGGCTACGTGACGCAGCCCTCGG
AGACGCGCAGCAGCGCTTGCTTCACGATGAACGCGCGGTCGCATTGGGCGTGCAGGCCGCCACTGTTGCTCACGAAATCG
GTACGCCTCTGTCTACAATTGCAATGTTGTCCGAAGAATTGCGCGACGCCGCACGCTCCGACAAGGGTCTCGCGCCATAC
ACAGCCGATCTCGAACTGCTCGAACAGCAGATGGCGCTGTGTACTTCGGCGCTTGCCCGGTTGCGCAGCCGGGCTTCCAC
GAGCGCCAGCCGGCAACCGGTCGGCGAGTGGCTCGAGTCGTTCGGCGAGCAGTGGCGCCTGCGTCATCCGCATGTGAAAT
TCGAGCGGCTCGGCATGCCGCCCGCGGAGGTCAGTCTTGACGATACCGTGGCCGTGAGTCAGATTCTCACGATTCTGCTC
GACAACGCCGCGCGTGCAAGTCGCGATCACGTCACGCTGTCCTGCTCGCTTGCGGCGCGTGGAGATCAGATCGTATTCGA
AGTCTGCGATGCGGGCTCCGGCATTCCGGCCGCGCTGCGCGGCTCGCTGGGGGCGATGCCGGTCGAGAGTACGCAAGGCG
GGCACGGCGTGGGCCTCTATCTGGCTTTTGCGGCGGCCGCGCGTCTGAAGGGATCGATCGAGCTGACCGATGTCAGCGCG
ATCAAGCCGCGCGGTACGCGTGCGGTCCTGAAACTGCCGCTCGCCGCGCGCAAATTTTTTGGCTCGGGCCGTCATGGTGC
CGAGCCATCCAACACGGAGAAACAAGTATGA

Upstream 100 bases:

>100_bases
ACGAGGGATCGGTTCGTGCGGCGCTGTCGCAAAAATTCCCATGTTACCGGCGCAAGCTCGCAAGGTAAGTCGGACGAGTC
CGAACAGGTAAACTAACGTC

Downstream 100 bases:

>100_bases
GTGAAATGAATTTTCTGGTGATCGACGACGACGAGGTGTTCTCCGGCATCCTCGCCCGTGGTCTCACCCGGCGCGGCTAC
ATGGTGAGCGAAGCGCACAA

Product: periplasmic sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MHRITNTGRVNLGHLFWLRSLAIIGQLMTIAFVQTFIGVQLPLPAMLLVIALEVIFNGLTWWRVSQQRPESNMELFGQIW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMAWLAAFAVACYAVLGFDSVPLNLDNPANLFDYYRAGMWVN
FMVSVGLIAWFVARMSGALRLRDAALGDAQQRLLHDERAVALGVQAATVAHEIGTPLSTIAMLSEELRDAARSDKGLAPY
TADLELLEQQMALCTSALARLRSRASTSASRQPVGEWLESFGEQWRLRHPHVKFERLGMPPAEVSLDDTVAVSQILTILL
DNAARASRDHVTLSCSLAARGDQIVFEVCDAGSGIPAALRGSLGAMPVESTQGGHGVGLYLAFAAAARLKGSIELTDVSA
IKPRGTRAVLKLPLAARKFFGSGRHGAEPSNTEKQV

Sequences:

>Translated_436_residues
MHRITNTGRVNLGHLFWLRSLAIIGQLMTIAFVQTFIGVQLPLPAMLLVIALEVIFNGLTWWRVSQQRPESNMELFGQIW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMAWLAAFAVACYAVLGFDSVPLNLDNPANLFDYYRAGMWVN
FMVSVGLIAWFVARMSGALRLRDAALGDAQQRLLHDERAVALGVQAATVAHEIGTPLSTIAMLSEELRDAARSDKGLAPY
TADLELLEQQMALCTSALARLRSRASTSASRQPVGEWLESFGEQWRLRHPHVKFERLGMPPAEVSLDDTVAVSQILTILL
DNAARASRDHVTLSCSLAARGDQIVFEVCDAGSGIPAALRGSLGAMPVESTQGGHGVGLYLAFAAAARLKGSIELTDVSA
IKPRGTRAVLKLPLAARKFFGSGRHGAEPSNTEKQV
>Mature_436_residues
MHRITNTGRVNLGHLFWLRSLAIIGQLMTIAFVQTFIGVQLPLPAMLLVIALEVIFNGLTWWRVSQQRPESNMELFGQIW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMAWLAAFAVACYAVLGFDSVPLNLDNPANLFDYYRAGMWVN
FMVSVGLIAWFVARMSGALRLRDAALGDAQQRLLHDERAVALGVQAATVAHEIGTPLSTIAMLSEELRDAARSDKGLAPY
TADLELLEQQMALCTSALARLRSRASTSASRQPVGEWLESFGEQWRLRHPHVKFERLGMPPAEVSLDDTVAVSQILTILL
DNAARASRDHVTLSCSLAARGDQIVFEVCDAGSGIPAALRGSLGAMPVESTQGGHGVGLYLAFAAAARLKGSIELTDVSA
IKPRGTRAVLKLPLAARKFFGSGRHGAEPSNTEKQV

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47133; Mature: 47133

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]