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The map label for this gene is regA [H]

Identifier: 91781464

GI number: 91781464

Start: 98372

End: 98914

Strand: Direct

Name: regA [H]

Synonym: Bxe_A4382

Alternate gene names: 91781464

Gene position: 98372-98914 (Clockwise)

Preceding gene: 91781463

Following gene: 91781468

Centisome position: 2.01

GC content: 62.43

Gene sequence:

>543_bases
ATGAGTGAAATGAATTTTCTGGTGATCGACGACGACGAGGTGTTCTCCGGCATCCTCGCCCGTGGTCTCACCCGGCGCGG
CTACATGGTGAGCGAAGCGCACAACGCGGATGAGGCCATCAAGCTGGCGAATCAGCAGAAGTTCAGCCAGATCACGGTGG
ATCTGCATCTCGGCAATGACTCCGGCCTCACGCTCGTCGCGCCCTTGCGCGATCTGCAGCCCGACGCGCGCATGCTGGTG
CTGACCGGCTATGCGAGCATCGCCACGGCGGTGCAGGCGGTGAAGGACGGCGCCGATAACTATCTGGCGAAGCCTGCCAA
CGTGGAGACGATCCTGTCCGCGCTGCAAAGTGAAGCGAGCGCGCTACAGGCAGAAGAGGCGATCGAGCATCCCACGCCGC
TGTCGGTGGCGCGTCTTGAGTGGGAGCATATTCAACGCGTGCTCGCCGAACACGGTGGCAACATCTCGGCTACAGCGCGC
GCGTTGAACATGCATCGGCGAACGCTGCAGCGCAAGCTCGCGAAGCGGCCGGTCAAGCAATAA

Upstream 100 bases:

>100_bases
CGCGCGGTACGCGTGCGGTCCTGAAACTGCCGCTCGCCGCGCGCAAATTTTTTGGCTCGGGCCGTCATGGTGCCGAGCCA
TCCAACACGGAGAAACAAGT

Downstream 100 bases:

>100_bases
GCGCGGCGTCCCGGCTGCGTTTGCCGTGAGCAAATGAAAACGGGCTGCCTTGGTAAAGGCAGCCCGTTTTTTATGCGGAT
CACATCAGATCAGATCTGTC

Product: two component Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSEMNFLVIDDDEVFSGILARGLTRRGYMVSEAHNADEAIKLANQQKFSQITVDLHLGNDSGLTLVAPLRDLQPDARMLV
LTGYASIATAVQAVKDGADNYLAKPANVETILSALQSEASALQAEEAIEHPTPLSVARLEWEHIQRVLAEHGGNISATAR
ALNMHRRTLQRKLAKRPVKQ

Sequences:

>Translated_180_residues
MSEMNFLVIDDDEVFSGILARGLTRRGYMVSEAHNADEAIKLANQQKFSQITVDLHLGNDSGLTLVAPLRDLQPDARMLV
LTGYASIATAVQAVKDGADNYLAKPANVETILSALQSEASALQAEEAIEHPTPLSVARLEWEHIQRVLAEHGGNISATAR
ALNMHRRTLQRKLAKRPVKQ
>Mature_179_residues
SEMNFLVIDDDEVFSGILARGLTRRGYMVSEAHNADEAIKLANQQKFSQITVDLHLGNDSGLTLVAPLRDLQPDARMLVL
TGYASIATAVQAVKDGADNYLAKPANVETILSALQSEASALQAEEAIEHPTPLSVARLEWEHIQRVLAEHGGNISATARA
LNMHRRTLQRKLAKRPVKQ

Specific function: Member of the two-component regulatory system regB/regA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in

COG id: COG4567

COG function: function code TK; Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=130, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788905, Length=142, Percent_Identity=28.8732394366197, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786784, Length=161, Percent_Identity=26.0869565217391, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR002197
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 19719; Mature: 19588

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEMNFLVIDDDEVFSGILARGLTRRGYMVSEAHNADEAIKLANQQKFSQITVDLHLGND
CCCCCEEEECCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEEEEEEEECCC
SGLTLVAPLRDLQPDARMLVLTGYASIATAVQAVKDGADNYLAKPANVETILSALQSEAS
CCEEEEECHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
ALQAEEAIEHPTPLSVARLEWEHIQRVLAEHGGNISATARALNMHRRTLQRKLAKRPVKQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEMNFLVIDDDEVFSGILARGLTRRGYMVSEAHNADEAIKLANQQKFSQITVDLHLGND
CCCCEEEECCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEEEEEEEECCC
SGLTLVAPLRDLQPDARMLVLTGYASIATAVQAVKDGADNYLAKPANVETILSALQSEAS
CCEEEEECHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
ALQAEEAIEHPTPLSVARLEWEHIQRVLAEHGGNISATARALNMHRRTLQRKLAKRPVKQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA