| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is flbA [H]
Identifier: 91781462
GI number: 91781462
Start: 95295
End: 96935
Strand: Reverse
Name: flbA [H]
Synonym: Bxe_A4384
Alternate gene names: 91781462
Gene position: 96935-95295 (Counterclockwise)
Preceding gene: 91781465
Following gene: 91781461
Centisome position: 1.98
GC content: 67.09
Gene sequence:
>1641_bases ATGCTACCTACTTCCTCCGGCGAGGCCGATGCCTCATCAGCTTTCCTGACTGTTTTGCGAGAAGCCGCAGCGGCCCGGCA CGACGGCACGGCGCAAACCGAGGCCGGCTGTCTCGACGCCGCAGCGCGACTCCATCCACTGGACGACGCGTCGCTCGCAT CGCTCACGGCTACGCTGCTCGAACAACACCGCCTCGGCGACGCAATCGAACTCGCCGCCATTATTGCCCAACTCGATCCG CACCGCGCTCTGGCGCACTTTCGTCACGGCTACGCATTGCAGATAGCGAACCGGCATGGCGAGGCCATCGCACCTTATCG CCGTGCACTCGCCATCGATCCGCGATTGCCGTGTCTGCGCAGCAATCTCGCGGGTGCACTGGCGCACGTCGGCGGCGACC TGAACGAGCAGATCGCGCTGCTGGAATGCGCGGTCCGCGACGAGCCCGGCGAGGGCGACGGCTGGACCAATCTGACGAAC GCATACCGCATGAATAGGGATCTGCCGCGCGCGCTCGAAGCCGGCGTCAAAGCCGTGCAATGCGCACCGCATAGCCCGCT GGCGCACAACAACTATGCGCTGACGCTGCGTGAGGCGCAACGCTGGAGCGAGGCGGAGCGGGCCGCCCAGACTGCTTGCG CATTGGGCCCGAACGACCCCGCCCTGCGCTCCAACCTGTCCATGCTGCAACTCATTCGTGCCGATTACGAGCACGGCTGG GCCTCGCACGAGGCGCGCTGGGACGGCTCCGCGGAGTTGGGCGGGAACCGCCCGGTCATGCCGGCGCCCCTCTGGCGCGG CGAACCTTTGGCCGGCAAGACGCTGCTCGTTTGGGGCGAACAAGGCATGGGCGACGTCTTGCAGTTCTGCCGCTATATCC CGATGCTCGCCGGGCGAGTGCATCGCGAAGGCGGCAGGCTCGTCTGGAACTCGTTCCCGCAAATGGGCGCACTGCTCGCG CGCAGCCTGGGCGCTCACGCGGACGAGTTCTCGGCGGGCGGCGGCGTCGAATCGCTACCCGCGTTCGACTACGAAATCCC GTTGCTCAGCCTGCCGCTGATATTCGATACGCGGGAGGAAACGATTCCGGCCGCCACGGCGCCCTACCTGCATGCAGACC CGGCTGCGATCCGGTCGTGGCAAAAAAGGCTGGCGGGCGAATCGAGGCTCAAGGTCGGGCTGACATGGACGGGTAGCCAC AGCCATCAGCGCAATCCATTTCGCCGTGTCGGGTGGGAACGCTATGCGGCGTATTTCGGCGGCATGCAGGACGTGGCGTT CTATTCGTTGCAGCCGGGCGCAACCGACGAGGTCGCGGCGGCACGAGCGGCCGGCCTGTCAATGACCGACTGCACCGCGG AATTCACGAGCTTCGACGACACCGCCGCGTTTGTGGGCGCGCTCGATCTCGTCATCACCGTTTGCACGTCGGCGGCGCAT CTGAGCGGCGCGCTCGGTCAGCGCACCTGGGTGCTGCTCGACGTCAACCCGCACTGGGTCTGGCTGCTCGACCGTCGCGA CAGCCCGTGGTATCCGGGCGCCACGCTGTACCGCCAACCGCGGTTCGGTGAATGGGAGCCGGCGCTGGCAGCGGTGGCGC GTGATCTGAAGGCATTGGCGGGCGAGCGCCGCGCGGCATGA
Upstream 100 bases:
>100_bases GACTTACCTTGCGAGCTTGCGCCGGTAACATGGGAATTTTTGCGACAGCGCCGCACGAACCGATCCCTCGTTATCGGTTT CTCCGTCGCGCAGCCTATCC
Downstream 100 bases:
>100_bases TTCGCCCGGGCGCTTCCGTGAAACAGCGCCTCCTCGGGACTTTTCTGTCAATCACACACCGGGCGGCGCCTGAGTCGCCC GCGCAATTTCGGCGGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MLPTSSGEADASSAFLTVLREAAAARHDGTAQTEAGCLDAAARLHPLDDASLASLTATLLEQHRLGDAIELAAIIAQLDP HRALAHFRHGYALQIANRHGEAIAPYRRALAIDPRLPCLRSNLAGALAHVGGDLNEQIALLECAVRDEPGEGDGWTNLTN AYRMNRDLPRALEAGVKAVQCAPHSPLAHNNYALTLREAQRWSEAERAAQTACALGPNDPALRSNLSMLQLIRADYEHGW ASHEARWDGSAELGGNRPVMPAPLWRGEPLAGKTLLVWGEQGMGDVLQFCRYIPMLAGRVHREGGRLVWNSFPQMGALLA RSLGAHADEFSAGGGVESLPAFDYEIPLLSLPLIFDTREETIPAATAPYLHADPAAIRSWQKRLAGESRLKVGLTWTGSH SHQRNPFRRVGWERYAAYFGGMQDVAFYSLQPGATDEVAAARAAGLSMTDCTAEFTSFDDTAAFVGALDLVITVCTSAAH LSGALGQRTWVLLDVNPHWVWLLDRRDSPWYPGATLYRQPRFGEWEPALAAVARDLKALAGERRAA
Sequences:
>Translated_546_residues MLPTSSGEADASSAFLTVLREAAAARHDGTAQTEAGCLDAAARLHPLDDASLASLTATLLEQHRLGDAIELAAIIAQLDP HRALAHFRHGYALQIANRHGEAIAPYRRALAIDPRLPCLRSNLAGALAHVGGDLNEQIALLECAVRDEPGEGDGWTNLTN AYRMNRDLPRALEAGVKAVQCAPHSPLAHNNYALTLREAQRWSEAERAAQTACALGPNDPALRSNLSMLQLIRADYEHGW ASHEARWDGSAELGGNRPVMPAPLWRGEPLAGKTLLVWGEQGMGDVLQFCRYIPMLAGRVHREGGRLVWNSFPQMGALLA RSLGAHADEFSAGGGVESLPAFDYEIPLLSLPLIFDTREETIPAATAPYLHADPAAIRSWQKRLAGESRLKVGLTWTGSH SHQRNPFRRVGWERYAAYFGGMQDVAFYSLQPGATDEVAAARAAGLSMTDCTAEFTSFDDTAAFVGALDLVITVCTSAAH LSGALGQRTWVLLDVNPHWVWLLDRRDSPWYPGATLYRQPRFGEWEPALAAVARDLKALAGERRAA >Mature_546_residues MLPTSSGEADASSAFLTVLREAAAARHDGTAQTEAGCLDAAARLHPLDDASLASLTATLLEQHRLGDAIELAAIIAQLDP HRALAHFRHGYALQIANRHGEAIAPYRRALAIDPRLPCLRSNLAGALAHVGGDLNEQIALLECAVRDEPGEGDGWTNLTN AYRMNRDLPRALEAGVKAVQCAPHSPLAHNNYALTLREAQRWSEAERAAQTACALGPNDPALRSNLSMLQLIRADYEHGW ASHEARWDGSAELGGNRPVMPAPLWRGEPLAGKTLLVWGEQGMGDVLQFCRYIPMLAGRVHREGGRLVWNSFPQMGALLA RSLGAHADEFSAGGGVESLPAFDYEIPLLSLPLIFDTREETIPAATAPYLHADPAAIRSWQKRLAGESRLKVGLTWTGSH SHQRNPFRRVGWERYAAYFGGMQDVAFYSLQPGATDEVAAARAAGLSMTDCTAEFTSFDDTAAFVGALDLVITVCTSAAH LSGALGQRTWVLLDVNPHWVWLLDRRDSPWYPGATLYRQPRFGEWEPALAAVARDLKALAGERRAA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59234; Mature: 59234
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTSSGEADASSAFLTVLREAAAARHDGTAQTEAGCLDAAARLHPLDDASLASLTATLL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EQHRLGDAIELAAIIAQLDPHRALAHFRHGYALQIANRHGEAIAPYRRALAIDPRLPCLR HHHHCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHEECCCCCHHHH SNLAGALAHVGGDLNEQIALLECAVRDEPGEGDGWTNLTNAYRMNRDLPRALEAGVKAVQ HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCEEE CAPHSPLAHNNYALTLREAQRWSEAERAAQTACALGPNDPALRSNLSMLQLIRADYEHGW ECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC ASHEARWDGSAELGGNRPVMPAPLWRGEPLAGKTLLVWGEQGMGDVLQFCRYIPMLAGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH HREGGRLVWNSFPQMGALLARSLGAHADEFSAGGGVESLPAFDYEIPLLSLPLIFDTREE HCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCHH TIPAATAPYLHADPAAIRSWQKRLAGESRLKVGLTWTGSHSHQRNPFRRVGWERYAAYFG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHC GMQDVAFYSLQPGATDEVAAARAAGLSMTDCTAEFTSFDDTAAFVGALDLVITVCTSAAH CHHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSGALGQRTWVLLDVNPHWVWLLDRRDSPWYPGATLYRQPRFGEWEPALAAVARDLKALA HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH GERRAA CCCCCC >Mature Secondary Structure MLPTSSGEADASSAFLTVLREAAAARHDGTAQTEAGCLDAAARLHPLDDASLASLTATLL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EQHRLGDAIELAAIIAQLDPHRALAHFRHGYALQIANRHGEAIAPYRRALAIDPRLPCLR HHHHCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHEECCCCCHHHH SNLAGALAHVGGDLNEQIALLECAVRDEPGEGDGWTNLTNAYRMNRDLPRALEAGVKAVQ HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCEEE CAPHSPLAHNNYALTLREAQRWSEAERAAQTACALGPNDPALRSNLSMLQLIRADYEHGW ECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC ASHEARWDGSAELGGNRPVMPAPLWRGEPLAGKTLLVWGEQGMGDVLQFCRYIPMLAGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH HREGGRLVWNSFPQMGALLARSLGAHADEFSAGGGVESLPAFDYEIPLLSLPLIFDTREE HCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCHH TIPAATAPYLHADPAAIRSWQKRLAGESRLKVGLTWTGSHSHQRNPFRRVGWERYAAYFG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHC GMQDVAFYSLQPGATDEVAAARAAGLSMTDCTAEFTSFDDTAAFVGALDLVITVCTSAAH CHHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSGALGQRTWVLLDVNPHWVWLLDRRDSPWYPGATLYRQPRFGEWEPALAAVARDLKALA HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH GERRAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]