| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781418
Identifier: 91781418
GI number: 91781418
Start: 44699
End: 46036
Strand: Direct
Name: 91781418
Synonym: Bxe_A4428
Alternate gene names: NA
Gene position: 44699-46036 (Clockwise)
Preceding gene: 91781417
Following gene: 91781419
Centisome position: 0.91
GC content: 58.22
Gene sequence:
>1338_bases ATGCAGTTTTTGAACTTGACGCCATTCGACACGTTGTGTTTCGGCGGGGTGGATCTCGAGGACGAACAATTCCGTGTCGT CGTGATGAAGGTCGGTTACGAGTTATTGCCGACAGATGTCCCAGGTCGCTTCGTCGCTCAAACCGTGAAAGAACCGGTGC CGCTTTGCATGCGAGACGAGTACTACGGAGCTGTCAACGAGAGTAGCGTTCGGGAGGAAAGCGATCTTGCGCACTACAAA CCGCGTTGTGACGTGATCATCCGCGGCAGTACGCACGCGCCGGATGGCGTGGCTGCAACGCATTGGAACGCGCGAATCAA GGTCAGCTCGCCGCAATCCTCGTTGCAGACCGTATCGCAGGTCGCCGGATTGTCTGCGAAGCTCGATCTTAAACCCGCCC TGGACGCGCGATATGCAGAACGTTGGGCGATTCCAGTCGCGTTGCCCGAGCATTCGTTCGACCCGGGCACTTCGCGCCAG GTCCTACTCGACAAGACGTTGCAGGTCAGCGGGCCGCGTGAGTTTCAGCGCCATTTCGCAGGTTGGAGCGTGAGCACACC TCAAGCGGCGACACACGTCCCGCTGCGATGGGAGCATGCGTTCGGGGGCGGCAGTGTGGTTCGCAACCCCCGGCATGGCC AGGATCCTGATGAGGTGGAGTTCCTGCTGAACGAAGTCTGTTTCAGCAATCCACTCGGTTGCGGATGGATTGAAGACCGT TATGCCGACACGCTTCGAAAGGCAGGGCTGAAACAGCCGGAACGATTGCCGGCGCCACAGATTGAAGTGCCGGACGGACC AACCCGGCGGCCGGTGACGATCCTGCATCCAGATCAGTTCGATACCACCAATCCCGCTGAATTCATCCGGATTGCGCAAG GATACGGTGAGCTTCCGGCGGGGTTCGGCATAGTAGGACGATCCTGGGCGCCGCGGCTGCAATTGGCCGGCACTTACGAT GAGAAATGGAAAGACGAGCGGTGGCCCTTACTCCCGGACGACTTCGATTTCGGTTACTGGAACTGTGCTCCACGGGACCA GCAGATCGAAGCACTTCCTGCGGACGCGCGCCTTGAATTATGGAATCTGGTGGATTCAGCTTTAACGCCGGATGGATATC TGCGCGTTGAATTGCCAGGTGACTGGCCACTGGTTTATATCCATCGCAACGATGGCATCTGCCTGCCGATGCCGATGACG ACCGATACGCTACTGATCGACACAGACGCCATGACGCTGACGCTCACACATCGCTTCCCGTTCATTGAAGAATCCTTTAT TGAACGGGTGGAGGCGCATATTCACCGGCCACTGGGCACGCCGCTCGCAACTGTTTGA
Upstream 100 bases:
>100_bases GTTTTTCATGTTCGCGGGAAACCGGGTTTTTAACGCTGGGTTTTTCCGGAAGCGTTCACACCGACCGGCGACCCTGAAAA GATTTACAGAGTAATCCTGA
Downstream 100 bases:
>100_bases GGGATCCTGTTCGCCTTCTGGCCGGGCGCCGGATAATTTTGGAATACTGACGAAGATGGCAACTAATCTCATTGCTCGCC GGGACGGCGGGTGGGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQFLNLTPFDTLCFGGVDLEDEQFRVVVMKVGYELLPTDVPGRFVAQTVKEPVPLCMRDEYYGAVNESSVREESDLAHYK PRCDVIIRGSTHAPDGVAATHWNARIKVSSPQSSLQTVSQVAGLSAKLDLKPALDARYAERWAIPVALPEHSFDPGTSRQ VLLDKTLQVSGPREFQRHFAGWSVSTPQAATHVPLRWEHAFGGGSVVRNPRHGQDPDEVEFLLNEVCFSNPLGCGWIEDR YADTLRKAGLKQPERLPAPQIEVPDGPTRRPVTILHPDQFDTTNPAEFIRIAQGYGELPAGFGIVGRSWAPRLQLAGTYD EKWKDERWPLLPDDFDFGYWNCAPRDQQIEALPADARLELWNLVDSALTPDGYLRVELPGDWPLVYIHRNDGICLPMPMT TDTLLIDTDAMTLTLTHRFPFIEESFIERVEAHIHRPLGTPLATV
Sequences:
>Translated_445_residues MQFLNLTPFDTLCFGGVDLEDEQFRVVVMKVGYELLPTDVPGRFVAQTVKEPVPLCMRDEYYGAVNESSVREESDLAHYK PRCDVIIRGSTHAPDGVAATHWNARIKVSSPQSSLQTVSQVAGLSAKLDLKPALDARYAERWAIPVALPEHSFDPGTSRQ VLLDKTLQVSGPREFQRHFAGWSVSTPQAATHVPLRWEHAFGGGSVVRNPRHGQDPDEVEFLLNEVCFSNPLGCGWIEDR YADTLRKAGLKQPERLPAPQIEVPDGPTRRPVTILHPDQFDTTNPAEFIRIAQGYGELPAGFGIVGRSWAPRLQLAGTYD EKWKDERWPLLPDDFDFGYWNCAPRDQQIEALPADARLELWNLVDSALTPDGYLRVELPGDWPLVYIHRNDGICLPMPMT TDTLLIDTDAMTLTLTHRFPFIEESFIERVEAHIHRPLGTPLATV >Mature_445_residues MQFLNLTPFDTLCFGGVDLEDEQFRVVVMKVGYELLPTDVPGRFVAQTVKEPVPLCMRDEYYGAVNESSVREESDLAHYK PRCDVIIRGSTHAPDGVAATHWNARIKVSSPQSSLQTVSQVAGLSAKLDLKPALDARYAERWAIPVALPEHSFDPGTSRQ VLLDKTLQVSGPREFQRHFAGWSVSTPQAATHVPLRWEHAFGGGSVVRNPRHGQDPDEVEFLLNEVCFSNPLGCGWIEDR YADTLRKAGLKQPERLPAPQIEVPDGPTRRPVTILHPDQFDTTNPAEFIRIAQGYGELPAGFGIVGRSWAPRLQLAGTYD EKWKDERWPLLPDDFDFGYWNCAPRDQQIEALPADARLELWNLVDSALTPDGYLRVELPGDWPLVYIHRNDGICLPMPMT TDTLLIDTDAMTLTLTHRFPFIEESFIERVEAHIHRPLGTPLATV
Specific function: Unknown
COG id: COG5351
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49963; Mature: 49963
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLNLTPFDTLCFGGVDLEDEQFRVVVMKVGYELLPTDVPGRFVAQTVKEPVPLCMRDE CCCCCCCCHHHHEECCCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHCCCCEEECCC YYGAVNESSVREESDLAHYKPRCDVIIRGSTHAPDGVAATHWNARIKVSSPQSSLQTVSQ CCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHH VAGLSAKLDLKPALDARYAERWAIPVALPEHSFDPGTSRQVLLDKTLQVSGPREFQRHFA HHCCCEEEECCCCCCHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEECCCCHHHHHHHC GWSVSTPQAATHVPLRWEHAFGGGSVVRNPRHGQDPDEVEFLLNEVCFSNPLGCGWIEDR CCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH YADTLRKAGLKQPERLPAPQIEVPDGPTRRPVTILHPDQFDTTNPAEFIRIAQGYGELPA HHHHHHHCCCCCCHHCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCC GFGIVGRSWAPRLQLAGTYDEKWKDERWPLLPDDFDFGYWNCAPRDQQIEALPADARLEL CCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH WNLVDSALTPDGYLRVELPGDWPLVYIHRNDGICLPMPMTTDTLLIDTDAMTLTLTHRFP HHHHHHHCCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCEEEEECCCEEEEEECCCC FIEESFIERVEAHIHRPLGTPLATV CHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQFLNLTPFDTLCFGGVDLEDEQFRVVVMKVGYELLPTDVPGRFVAQTVKEPVPLCMRDE CCCCCCCCHHHHEECCCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHCCCCEEECCC YYGAVNESSVREESDLAHYKPRCDVIIRGSTHAPDGVAATHWNARIKVSSPQSSLQTVSQ CCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHH VAGLSAKLDLKPALDARYAERWAIPVALPEHSFDPGTSRQVLLDKTLQVSGPREFQRHFA HHCCCEEEECCCCCCHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEECCCCHHHHHHHC GWSVSTPQAATHVPLRWEHAFGGGSVVRNPRHGQDPDEVEFLLNEVCFSNPLGCGWIEDR CCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH YADTLRKAGLKQPERLPAPQIEVPDGPTRRPVTILHPDQFDTTNPAEFIRIAQGYGELPA HHHHHHHCCCCCCHHCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCC GFGIVGRSWAPRLQLAGTYDEKWKDERWPLLPDDFDFGYWNCAPRDQQIEALPADARLEL CCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH WNLVDSALTPDGYLRVELPGDWPLVYIHRNDGICLPMPMTTDTLLIDTDAMTLTLTHRFP HHHHHHHCCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCEEEEECCCEEEEEECCCC FIEESFIERVEAHIHRPLGTPLATV CHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA