| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is dbpA [H]
Identifier: 91781411
GI number: 91781411
Start: 33113
End: 34516
Strand: Direct
Name: dbpA [H]
Synonym: Bxe_A4436
Alternate gene names: 91781411
Gene position: 33113-34516 (Clockwise)
Preceding gene: 91781410
Following gene: 91781412
Centisome position: 0.68
GC content: 63.89
Gene sequence:
>1404_bases ATGAACAGTCCCCATACCGCGGGCGCGCCGTTTAGCCAGCTATCGCTGCCGCCCGCGACGCTCGCCAACCTGACGCAGCT CGGCTACGTCGAGATGACGCCGATTCAGGCCGCGAGCCTGCCCATCGCGCTTGCCGGCCATGATCTGATCGCCCAGGCGA AAACCGGCAGCGGCAAGACTGCGGCGTTTTCGCTGGCGCTGCTGGCGCGCCTCGACGTGCGCAACTTTGCCGTGCAGGCA ATGGTGCTGTGCCCGACGCGCGAACTCGCCGACCAGGTCACGCAGGAAATCCGGCGCCTCGCGCGCGCCGAAGAAAACAT CAAGGTGCTGACGTTGTGCGGCGGCACGCCGATGCGTCCGCAAACGGCGAGTCTCGAACACGGCGCGCACATCGTGGTGG GCACGCCGGGCCGCATCATGGATCACCTGGAGCGCGGCAGCCTGCCGCTGCAGTCGCTCAATACGCTGGTGCTCGACGAA GCGGACCGCATGCTCGACATGGGTTTCTTCGACGATATCGCCACCGTCGTGAAGCAATGCCCGAAGGAACGGCAAACGCT GCTGTTCTCGGCGACGTATCCCGAAGGCATCGTCAAACTGAGCCAGCAATTCCTGCGCAATCCGAAAGAAGTCAAACTCG CGGAACGGCACGACAACACCAAGATCCGTCAGCGCTTCTATGAAGTGACCGAAGACGAGCGTCTGCACGCGGTCGGTCTG CTGTTGAACCACTATCGTCCGGTGAGCACGCTGGCGTTCTGCAATACCAAGCAGCAATGCCGCGATCTGCTCGACGTGCT GCGCGCGCAGGGTTTTCATGCGCTCGCGCTGCATGGCGAGCTCGACCAGCGTGAACGCGATCAGGTGCTGATCCAGTTCG CCAATCGCAGCTGCTCGGTGCTGGTGGCCACCGACGTCGCCGCGCGCGGTCTCGACATCGCGCAACTCGAAGCCGTGATC AACGTCGACGTGACGCCGGACCCGGAAGTGCATGTGCACCGCATCGGCCGCACGGGCCGCGCCGATCAGGAAGGCTGGGC TTTGAGTCTGGCGAGCATGAACGAGATGGGCCGTGTCGGCAGTCTCGAACAGGCGCAAAAGCGCGACGTCGAATGGCACA AGCTGTCCGAACTCACGGCGACGAGCAATGAACCGCTGTTGCCGCCTATGGAAACGTTGCAGATTCTCGGCGGCCGTAAG GAAAAGATCCGTCCCGGCGACGTGCTCGGCGCGCTGACCGGTGAAGCGGGTTTCGCCGGCTCGCAGATCGGCAAGATCAA CGTGACGGAAATGTCCACCTACGTGGCGGTGGAGCGCAGCGTCGCCCGTGAGGCCGTGCGCAAGCTCAGCGCAGGCAAGG TGAAGGGCAAGAAGGTCAAAGTCCGCCTGATGGACGACGCCTGA
Upstream 100 bases:
>100_bases ACGACGGCTCGGTGCTGTACGAGCAGATCGAAGGCCGTCCCGCCACCGGCCCTATGGCCGAATAGTTTTTGCTTCCAGCC GATTGCGAGCCATCACACCT
Downstream 100 bases:
>100_bases TGGTTGACGCCTGATGGCCCAGGCCTGAGGCGAAGCCGGTCGCGAGCGTTCCGCTCGCGACCGTGCGCATCACATTACGT CATACCTCTGCAGTTTTCCG
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MNSPHTAGAPFSQLSLPPATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDVRNFAVQA MVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDE ADRMLDMGFFDDIATVVKQCPKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVI NVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGSLEQAQKRDVEWHKLSELTATSNEPLLPPMETLQILGGRK EKIRPGDVLGALTGEAGFAGSQIGKINVTEMSTYVAVERSVAREAVRKLSAGKVKGKKVKVRLMDDA
Sequences:
>Translated_467_residues MNSPHTAGAPFSQLSLPPATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDVRNFAVQA MVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDE ADRMLDMGFFDDIATVVKQCPKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVI NVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGSLEQAQKRDVEWHKLSELTATSNEPLLPPMETLQILGGRK EKIRPGDVLGALTGEAGFAGSQIGKINVTEMSTYVAVERSVAREAVRKLSAGKVKGKKVKVRLMDDA >Mature_467_residues MNSPHTAGAPFSQLSLPPATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDVRNFAVQA MVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDE ADRMLDMGFFDDIATVVKQCPKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVI NVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGSLEQAQKRDVEWHKLSELTATSNEPLLPPMETLQILGGRK EKIRPGDVLGALTGEAGFAGSQIGKINVTEMSTYVAVERSVAREAVRKLSAGKVKGKKVKVRLMDDA
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=34.8189415041783, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI45446747, Length=378, Percent_Identity=37.5661375661376, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI45446743, Length=378, Percent_Identity=37.5661375661376, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI4758138, Length=362, Percent_Identity=37.0165745856354, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=37.3297002724796, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=37.3297002724796, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI7661920, Length=357, Percent_Identity=33.8935574229692, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=36.6120218579235, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=34.1530054644809, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=38.544474393531, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=38.544474393531, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=38.544474393531, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI262118318, Length=403, Percent_Identity=35.4838709677419, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI31542656, Length=383, Percent_Identity=34.7258485639687, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI216548263, Length=363, Percent_Identity=36.3636363636364, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI262231852, Length=363, Percent_Identity=36.3636363636364, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13518015, Length=363, Percent_Identity=36.3636363636364, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=33.5038363171356, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=37.4005305039788, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=37.4005305039788, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI224593278, Length=377, Percent_Identity=36.3395225464191, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=34.7938144329897, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=34.5714285714286, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=34.4, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI21071032, Length=354, Percent_Identity=35.5932203389831, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI51094101, Length=363, Percent_Identity=34.7107438016529, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI164419743, Length=363, Percent_Identity=34.7107438016529, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=32.2128851540616, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=32.2128851540616, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=32.2128851540616, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=35.0609756097561, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI4503529, Length=327, Percent_Identity=33.9449541284404, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI256223453, Length=342, Percent_Identity=32.4561403508772, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI38327634, Length=376, Percent_Identity=32.4468085106383, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=34.6049046321526, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI41327779, Length=416, Percent_Identity=31.7307692307692, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=33.4277620396601, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI8922886, Length=375, Percent_Identity=32.2666666666667, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI6005743, Length=375, Percent_Identity=32.2666666666667, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=30.958904109589, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI9506931, Length=394, Percent_Identity=32.994923857868, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=30.9859154929577, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI62241022, Length=350, Percent_Identity=32.2857142857143, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=31.7073170731707, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=30.0715990453461, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI62241024, Length=328, Percent_Identity=32.3170731707317, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI38569503, Length=344, Percent_Identity=28.4883720930233, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI38569505, Length=348, Percent_Identity=28.448275862069, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=32.2388059701493, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=33.2298136645963, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI256773275, Length=415, Percent_Identity=29.6385542168675, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=34.375, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI154759257, Length=448, Percent_Identity=29.0178571428571, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1787605, Length=455, Percent_Identity=52.3076923076923, Blast_Score=460, Evalue=1e-131, Organism=Escherichia coli, GI87082221, Length=358, Percent_Identity=40.7821229050279, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=39.2370572207085, Blast_Score=251, Evalue=1e-67, Organism=Escherichia coli, GI1790214, Length=361, Percent_Identity=35.1800554016621, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1788930, Length=349, Percent_Identity=35.8166189111748, Blast_Score=180, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=35.7142857142857, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=33.0601092896175, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=38.8268156424581, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI71995724, Length=357, Percent_Identity=33.8935574229692, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507121, Length=357, Percent_Identity=33.8935574229692, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=39.2265193370166, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=39.2265193370166, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=39.2265193370166, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17555296, Length=380, Percent_Identity=35.7894736842105, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17510559, Length=382, Percent_Identity=35.0785340314136, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=37.1191135734072, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI32565321, Length=390, Percent_Identity=34.1025641025641, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507877, Length=395, Percent_Identity=35.9493670886076, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=38.7362637362637, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI17507879, Length=395, Percent_Identity=35.9493670886076, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=32.8690807799443, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=32.8690807799443, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI86570094, Length=338, Percent_Identity=38.7573964497041, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=31.3559322033898, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=33.6021505376344, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507945, Length=370, Percent_Identity=35.6756756756757, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=31.2997347480106, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17509811, Length=367, Percent_Identity=32.9700272479564, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI115532546, Length=365, Percent_Identity=31.7808219178082, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=33.2480818414322, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536101, Length=389, Percent_Identity=33.1619537275064, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536103, Length=390, Percent_Identity=33.0769230769231, Blast_Score=184, Evalue=7e-47, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=31.0144927536232, Blast_Score=184, Evalue=7e-47, Organism=Caenorhabditis elegans, GI17537549, Length=389, Percent_Identity=32.6478149100257, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17505370, Length=371, Percent_Identity=31.5363881401617, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=28.2548476454294, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI193208216, Length=371, Percent_Identity=30.188679245283, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=30.5128205128205, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=30.7486631016043, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17556951, Length=385, Percent_Identity=29.0909090909091, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71990816, Length=405, Percent_Identity=30.6172839506173, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=30.2387267904509, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=24.4444444444444, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148291, Length=394, Percent_Identity=29.1878172588832, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=24.2424242424242, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71987152, Length=100, Percent_Identity=37, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=38.375350140056, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=38.2978723404255, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6321856, Length=357, Percent_Identity=38.0952380952381, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=37.6373626373626, Blast_Score=219, Evalue=9e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=392, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=37.0879120879121, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=32.7777777777778, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=32.1525885558583, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=34.6049046321526, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=34.6049046321526, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=370, Percent_Identity=32.4324324324324, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=396, Percent_Identity=30.3030303030303, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=30, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=387, Percent_Identity=31.266149870801, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=30.8310991957105, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=32.7272727272727, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=434, Percent_Identity=29.0322580645161, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=387, Percent_Identity=29.1989664082687, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=30.4878048780488, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=378, Percent_Identity=29.1005291005291, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=340, Percent_Identity=28.2352941176471, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6320173, Length=214, Percent_Identity=35.5140186915888, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323306, Length=430, Percent_Identity=27.2093023255814, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=26.5734265734266, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=363, Percent_Identity=25.6198347107438, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321374, Length=402, Percent_Identity=22.3880597014925, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI18857967, Length=356, Percent_Identity=37.9213483146067, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=38.1868131868132, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=37.431693989071, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=37.431693989071, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=39.2550143266476, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24662330, Length=370, Percent_Identity=35.9459459459459, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24645031, Length=357, Percent_Identity=34.733893557423, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI21355075, Length=344, Percent_Identity=36.3372093023256, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24583279, Length=359, Percent_Identity=32.033426183844, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=32.033426183844, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=38.9355742296919, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=35.2459016393443, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=33.8753387533875, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.0666666666667, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24582080, Length=334, Percent_Identity=35.3293413173653, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24582078, Length=334, Percent_Identity=35.3293413173653, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI17136248, Length=334, Percent_Identity=35.3293413173653, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24582075, Length=334, Percent_Identity=35.3293413173653, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28575014, Length=373, Percent_Identity=33.7801608579088, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI17136814, Length=350, Percent_Identity=37.4285714285714, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=37.1830985915493, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24584994, Length=389, Percent_Identity=32.3907455012853, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=37.9746835443038, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI24581954, Length=381, Percent_Identity=32.0209973753281, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581952, Length=381, Percent_Identity=32.0209973753281, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581956, Length=381, Percent_Identity=32.0209973753281, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571808, Length=374, Percent_Identity=31.0160427807487, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI28571809, Length=374, Percent_Identity=31.0160427807487, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI21355559, Length=393, Percent_Identity=35.1145038167939, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17647335, Length=373, Percent_Identity=30.2949061662198, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642822, Length=370, Percent_Identity=30.5405405405405, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=29.3367346938776, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=30.3116147308782, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI24668515, Length=368, Percent_Identity=31.5217391304348, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859659, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI19920478, Length=385, Percent_Identity=28.3116883116883, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI20130173, Length=362, Percent_Identity=28.7292817679558, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI17136666, Length=416, Percent_Identity=28.125, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=22.2543352601156, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51196; Mature: 51196
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPHTAGAPFSQLSLPPATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKT CCCCCCCCCCHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEECCHHEEECCCCCCCH AAFSLALLARLDVRNFAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRP HHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDEADRMLDMGFFDDIATVVKQC CCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC PKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL CCCHHEEEEEECCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHCCCCCHHHHHHH LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSV HHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE LVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVG EEEECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHCCCC SLEQAQKRDVEWHKLSELTATSNEPLLPPMETLQILGGRKEKIRPGDVLGALTGEAGFAG CHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCC SQIGKINVTEMSTYVAVERSVAREAVRKLSAGKVKGKKVKVRLMDDA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure MNSPHTAGAPFSQLSLPPATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKT CCCCCCCCCCHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEECCHHEEECCCCCCCH AAFSLALLARLDVRNFAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRP HHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDEADRMLDMGFFDDIATVVKQC CCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC PKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL CCCHHEEEEEECCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHCCCCCHHHHHHH LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSV HHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE LVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVG EEEECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHCCCC SLEQAQKRDVEWHKLSELTATSNEPLLPPMETLQILGGRKEKIRPGDVLGALTGEAGFAG CHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCC SQIGKINVTEMSTYVAVERSVAREAVRKLSAGKVKGKKVKVRLMDDA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]