| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790515
Identifier: 91790515
GI number: 91790515
Start: 4973859
End: 4974365
Strand: Direct
Name: 91790515
Synonym: Bpro_4686
Alternate gene names: NA
Gene position: 4973859-4974365 (Clockwise)
Preceding gene: 91790512
Following gene: 91790516
Centisome position: 95.65
GC content: 70.22
Gene sequence:
>507_bases ATGCCCAACATGGATGCCCAGGCGATGACCAGCCCGCTTGGCGTTGCCGAACCTGGCTGGCGCCTCACCCACCTGGGGCG CCTCCTGGGCCACGCCCTGCGCCGATTTGACGAACGCGTGCTGTCCCTGATGGCCAGCAATGCGGACGTGCCGCTGGCCC TGTCCAACCTGGCGGCGCGCGACCAGGTGGGCGCAGCCCATATCCACATCACCCGGCACCTCGCCGTCGGCGGCTCGCGC CTGACAGACCTGGCGCTGAGCGCCGGCATGAGCAAACAGGCCATGGGCGACCTGGTCGACCAGTGCGAGGCCTGGGGACT GGTCACGCGCCAGCCCGATCCCCATGACAAACGGGCGCGCCGCGTGGTGTTCACCGAATCCGGCCTGCTCTGGCTGGATG CCTTCCAGCGCGCGGTGCGTCAGACCGAAGAGGAGTTCCGGCAGGCGGTGGGGGCCGATGTGGCGACGGTGGTGGCGCTG GGACTGGAGGCGTATGCGGGGGCGTGA
Upstream 100 bases:
>100_bases TGGATGCATGATCAGTACTTTATGGGCGCTATAAAAATAAGTAAACCCTATTTTTAGTCAGTTTGCCTGATTAACTGCCG CCCTGCGCTACCATCTCCGG
Downstream 100 bases:
>100_bases GCGCCAAGCAGCGAATATCTGGAGTCAAGCTTTCCGCCGGACCGTACACACCAGCAGGGGCCGCGGAACCGGCTTTGCCG GGCCGCAGGCGCAGCGCCCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein; Transcriptional Regulator
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPNMDAQAMTSPLGVAEPGWRLTHLGRLLGHALRRFDERVLSLMASNADVPLALSNLAARDQVGAAHIHITRHLAVGGSR LTDLALSAGMSKQAMGDLVDQCEAWGLVTRQPDPHDKRARRVVFTESGLLWLDAFQRAVRQTEEEFRQAVGADVATVVAL GLEAYAGA
Sequences:
>Translated_168_residues MPNMDAQAMTSPLGVAEPGWRLTHLGRLLGHALRRFDERVLSLMASNADVPLALSNLAARDQVGAAHIHITRHLAVGGSR LTDLALSAGMSKQAMGDLVDQCEAWGLVTRQPDPHDKRARRVVFTESGLLWLDAFQRAVRQTEEEFRQAVGADVATVVAL GLEAYAGA >Mature_167_residues PNMDAQAMTSPLGVAEPGWRLTHLGRLLGHALRRFDERVLSLMASNADVPLALSNLAARDQVGAAHIHITRHLAVGGSRL TDLALSAGMSKQAMGDLVDQCEAWGLVTRQPDPHDKRARRVVFTESGLLWLDAFQRAVRQTEEEFRQAVGADVATVVALG LEAYAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18146; Mature: 18015
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNMDAQAMTSPLGVAEPGWRLTHLGRLLGHALRRFDERVLSLMASNADVPLALSNLAAR CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DQVGAAHIHITRHLAVGGSRLTDLALSAGMSKQAMGDLVDQCEAWGLVTRQPDPHDKRAR HCCCHHHEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHC RVVFTESGLLWLDAFQRAVRQTEEEFRQAVGADVATVVALGLEAYAGA EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PNMDAQAMTSPLGVAEPGWRLTHLGRLLGHALRRFDERVLSLMASNADVPLALSNLAAR CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DQVGAAHIHITRHLAVGGSRLTDLALSAGMSKQAMGDLVDQCEAWGLVTRQPDPHDKRAR HCCCHHHEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHC RVVFTESGLLWLDAFQRAVRQTEEEFRQAVGADVATVVALGLEAYAGA EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA