| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is argC [H]
Identifier: 91790512
GI number: 91790512
Start: 4970623
End: 4971648
Strand: Direct
Name: argC [H]
Synonym: Bpro_4683
Alternate gene names: 91790512
Gene position: 4970623-4971648 (Clockwise)
Preceding gene: 91790504
Following gene: 91790515
Centisome position: 95.58
GC content: 63.16
Gene sequence:
>1026_bases ATGCTGCGATGCACAATCATTGTGCGGTTCCTACTTAGCAATTTAGACCCCGACAGGCGCTCCCGGGCAGTCACCGGTAA CCCGTCCGTCCCCCTGAAAGTTCTTATGCCCAAAGTTTTTATTGATGGAGAAGCCGGCACCACCGGCCTGCAAATCCGCG AACGGCTGCAAGCCATGCCCCAAATCGAACTGGTCAGCATCGCACCCGAACTGCGCAAGGATGCGGCGGCCAAGCGCGAC CTGATGGCACAGGTGGACCTGGTGATCCTGTGCCTGCACGACGACGCGGCACGCGAATCAGTGGCCATGATAGACGCACT GCCAGGCAATGGAGGCAAAAAACCCAAGATCATCGACGCCTCCACCGCCCACCGCACCACGCCAGGCTGGGTCTATGGCT TTCCGGAACTCACCGCCGCACAGCGCGCCGCCGTGGTGGCGGCGGATCGCGTCGGCAACCCGGGGTGCTACGCGACCGGC GCGATTGCATTGATCCGGCCGCTGGTGGATGCCGGCCTGATCCCGGCCGACTTCCCCCTGAGCCTTCCCTCGGTGAGCGG CTATTCCGGCGGCGGACGGCAGATGATCGAGGCTTATGAGGCCGGCACTGCGCCTTTGTTCGAGGTGTACGGTCTGGGCC TGGAACACAAGCACCTGCCTGAAATCATGAAATACACCGGCCTGTCGCGCCGCCCGGTGTTCATCCCGTCGGTTGGCAAC TTCAAGCAAGGCATGCTGGTGCAGCTGCCGCTGCACCTCGACCTGCTGCCCGGCAAACCAACGGCCGCGCAGTTGCACGA CGTGCTGGCCCGGCATTACGCCGGCAGCGAATGGGTCTCGGTAGAGGCCGCGCCCGCCTCGGGCAAGCTGGATGCGCTGG CGCTCAATGACACCAACAAGATGGAGTTGCGCGTGTTCGGCAATGAAACCTATCGCCATGCGGTGCTGATTGCGCGACTG GACAACCTCGGCAAGGGCGCCTCCGGCGCGGCGGTACAAAACCTCAAGCTGATGCTGGGGATATAG
Upstream 100 bases:
>100_bases GGAGTGCAACAGGAATTTGGAAAGAGACTGTTGAAAATAGGAAACAGGCCCCAAAACGCCATGTTAGCGGTCACTGCAGG CAGCAATATGGAACTGTATC
Downstream 100 bases:
>100_bases AGCCCCCACGCTTTTCACTGCGTGTAATGCGCTGCCCCCCGAGGGGGCGCTGCGCCTGCGGTCTGGCAAAGCCAGTCCCG CGGCCCCGGCTGGAGGGGGA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLRCTIIVRFLLSNLDPDRRSRAVTGNPSVPLKVLMPKVFIDGEAGTTGLQIRERLQAMPQIELVSIAPELRKDAAAKRD LMAQVDLVILCLHDDAARESVAMIDALPGNGGKKPKIIDASTAHRTTPGWVYGFPELTAAQRAAVVAADRVGNPGCYATG AIALIRPLVDAGLIPADFPLSLPSVSGYSGGGRQMIEAYEAGTAPLFEVYGLGLEHKHLPEIMKYTGLSRRPVFIPSVGN FKQGMLVQLPLHLDLLPGKPTAAQLHDVLARHYAGSEWVSVEAAPASGKLDALALNDTNKMELRVFGNETYRHAVLIARL DNLGKGASGAAVQNLKLMLGI
Sequences:
>Translated_341_residues MLRCTIIVRFLLSNLDPDRRSRAVTGNPSVPLKVLMPKVFIDGEAGTTGLQIRERLQAMPQIELVSIAPELRKDAAAKRD LMAQVDLVILCLHDDAARESVAMIDALPGNGGKKPKIIDASTAHRTTPGWVYGFPELTAAQRAAVVAADRVGNPGCYATG AIALIRPLVDAGLIPADFPLSLPSVSGYSGGGRQMIEAYEAGTAPLFEVYGLGLEHKHLPEIMKYTGLSRRPVFIPSVGN FKQGMLVQLPLHLDLLPGKPTAAQLHDVLARHYAGSEWVSVEAAPASGKLDALALNDTNKMELRVFGNETYRHAVLIARL DNLGKGASGAAVQNLKLMLGI >Mature_341_residues MLRCTIIVRFLLSNLDPDRRSRAVTGNPSVPLKVLMPKVFIDGEAGTTGLQIRERLQAMPQIELVSIAPELRKDAAAKRD LMAQVDLVILCLHDDAARESVAMIDALPGNGGKKPKIIDASTAHRTTPGWVYGFPELTAAQRAAVVAADRVGNPGCYATG AIALIRPLVDAGLIPADFPLSLPSVSGYSGGGRQMIEAYEAGTAPLFEVYGLGLEHKHLPEIMKYTGLSRRPVFIPSVGN FKQGMLVQLPLHLDLLPGKPTAAQLHDVLARHYAGSEWVSVEAAPASGKLDALALNDTNKMELRVFGNETYRHAVLIARL DNLGKGASGAAVQNLKLMLGI
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=235, Percent_Identity=30.2127659574468, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320913, Length=300, Percent_Identity=29, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR010136 - InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF01118 Semialdhyde_dh [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 36516; Mature: 36516
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRCTIIVRFLLSNLDPDRRSRAVTGNPSVPLKVLMPKVFIDGEAGTTGLQIRERLQAMP CEEHHHHHHHHHHCCCCCHHCCEECCCCCCCCEEECCEEEECCCCCCCHHHHHHHHHHCC QIELVSIAPELRKDAAAKRDLMAQVDLVILCLHDDAARESVAMIDALPGNGGKKPKIIDA CEEEEECCHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHEEEEEECCCCCCCCCEEEEC STAHRTTPGWVYGFPELTAAQRAAVVAADRVGNPGCYATGAIALIRPLVDAGLIPADFPL CCCCCCCCCEEECCCCHHHHHHHHEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC SLPSVSGYSGGGRQMIEAYEAGTAPLFEVYGLGLEHKHLPEIMKYTGLSRRPVFIPSVGN CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCC FKQGMLVQLPLHLDLLPGKPTAAQLHDVLARHYAGSEWVSVEAAPASGKLDALALNDTNK CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCE MELRVFGNETYRHAVLIARLDNLGKGASGAAVQNLKLMLGI EEEEEECCCCHHHEEEEEEHHCCCCCCCCCHHHEEEEEECC >Mature Secondary Structure MLRCTIIVRFLLSNLDPDRRSRAVTGNPSVPLKVLMPKVFIDGEAGTTGLQIRERLQAMP CEEHHHHHHHHHHCCCCCHHCCEECCCCCCCCEEECCEEEECCCCCCCHHHHHHHHHHCC QIELVSIAPELRKDAAAKRDLMAQVDLVILCLHDDAARESVAMIDALPGNGGKKPKIIDA CEEEEECCHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHEEEEEECCCCCCCCCEEEEC STAHRTTPGWVYGFPELTAAQRAAVVAADRVGNPGCYATGAIALIRPLVDAGLIPADFPL CCCCCCCCCEEECCCCHHHHHHHHEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC SLPSVSGYSGGGRQMIEAYEAGTAPLFEVYGLGLEHKHLPEIMKYTGLSRRPVFIPSVGN CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCC FKQGMLVQLPLHLDLLPGKPTAAQLHDVLARHYAGSEWVSVEAAPASGKLDALALNDTNK CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCE MELRVFGNETYRHAVLIARLDNLGKGASGAAVQNLKLMLGI EEEEEECCCCHHHEEEEEEHHCCCCCCCCCHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA