| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790505
Identifier: 91790505
GI number: 91790505
Start: 4963929
End: 4964720
Strand: Reverse
Name: 91790505
Synonym: Bpro_4676
Alternate gene names: NA
Gene position: 4964720-4963929 (Counterclockwise)
Preceding gene: 91790506
Following gene: 91790503
Centisome position: 95.47
GC content: 59.97
Gene sequence:
>792_bases ATGAAAGTACGTGTATTGGGCTGTTCGGGAGCCATTGCCAGGGACTGCCGCACCACGTCTTTTTTGCTGGACCATGATTT GCTGGTCGACGCGGGTACGGGTGTCGGGGATCTCACCCTCGATGAAATGCGTGGCATTGACCACGTCCTGCTGACACATT CCCATCTGGATCACGTGGCCGCGCTGCCGCTGATGGTGGACGCGATCGCCGGTCAGAAAACCAGGCCGATACAGATCCAT GCCCTGCAAGGCACGATCGACGCGCTGAAGGCCCACATTTTCAACAACACGATCTGGCCCGATTTCTCAAGAATTCCAGA TCCGGCAACACCTTTCATCAGTTTTCATCCGCTGGAGCTGGGTCAAACCCTGGAGTTGGCCGGCAAGCATATTGAAGTGC TTCCCGCCGTGCACACGGTGCCAGCCGTCGGATATGCGGTGAGCGCCGGCAAGGGCTGCTGGGTGTTTACCGGCGACACC GAGCGCAATCCTGCGCTGTGGGCCCGCATTAACCAGCTGGACGTCGCGATGCTGGTCATCGAGACCGCCTTCAGCAACCG CGAGCGTGACCTGGCCAAACGCAGCCTGCATCTGGCGCCCCATGCGCTTGCCAGCGAACTTGACTGCATTGCAAGCGGCA AGAGCTATCCCATCTACATCACCCACACCAAGCCCGCCGAGACAGAGCTCATCATGGCCGAGATCCAGCGCTTCGACCAG ACGCGCACCCTGGCGCGCCACATTTCGCATGACATCCGGTGGCTGCGGGCGGGTCAGGAGTTTGAACTGTGA
Upstream 100 bases:
>100_bases TGAAGCGTGTAGTCTCCACGAGCTGGCTGTTTTTTGACCCCAAGCGGGATGGCGCAACCAGTTTCGAAACCATGTAACCT CAAGCCAGGGTGGAAACCTC
Downstream 100 bases:
>100_bases AAGTCCTTGTTTAGGGCTCGTTCGGGAATAACTTGCACATTTGACTCGCCAGCTTCGGGCGCGCTGCGTTGTTGCGACTC GCTTGTGTGGCCTGGCCACA
Product: cyclic-AMP phosphodiesterase
Products: NA
Alternate protein names: Cyclic-AMP Phosphodiesterase; Metal Dependent Phosphohydrolase; CAMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; 3 5'-Cyclic-Nucleotide Phosphodiesterase; Metallo-Beta-Lactamase; Response Regulator; CAMP Phosphodiesterases Class-II; Camp Phosphodiesterases Class-Ii; Cyclic-AMP Phosphodiesterase Class-II; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase; CAMP Phosphodiesterase-Like Protein; GAF Domain Protein; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ TRTLARHISHDIRWLRAGQEFEL
Sequences:
>Translated_263_residues MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ TRTLARHISHDIRWLRAGQEFEL >Mature_263_residues MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ TRTLARHISHDIRWLRAGQEFEL
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29034; Mature: 29034
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVA CEEEEEECCCCHHHHCCHHHEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEHHHHHHHH ALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLEL HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCC GQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDTERNPALWARINQLDVAMLVI CCHHHHCCCEEEEEHHHHHHHHHCEEEECCCEEEEEECCCCCCCHHEEEHHHHHHHHHHH ETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH TRTLARHISHDIRWLRAGQEFEL HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVA CEEEEEECCCCHHHHCCHHHEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEHHHHHHHH ALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLEL HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCC GQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDTERNPALWARINQLDVAMLVI CCHHHHCCCEEEEEHHHHHHHHHCEEEECCCEEEEEECCCCCCCHHEEEHHHHHHHHHHH ETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH TRTLARHISHDIRWLRAGQEFEL HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA