| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pilE [H]
Identifier: 91790503
GI number: 91790503
Start: 4962936
End: 4963445
Strand: Reverse
Name: pilE [H]
Synonym: Bpro_4674
Alternate gene names: 91790503
Gene position: 4963445-4962936 (Counterclockwise)
Preceding gene: 91790505
Following gene: 91790502
Centisome position: 95.45
GC content: 54.12
Gene sequence:
>510_bases ATGAAGCGTTCCATGCAAAAGGGTTTCACCCTGATCGAGTTGATGATCGTTGTGGCGATTATCGGTATTCTGGCTGCCGT GGCTTTGCCTGCTTACCAGGATTACACGAAGCGCGCCAAGATGTCTGAAGTGATTTTGGCGGCTTCTTCCTGCCGTACCA GTATTACTGAAACCATCCAGTCTGCGGCCTCTGGCAGTACCATCGCTGCGAATGGCTGGGGTTGCGAGGTGTCTACAGGT TCGGGTACCAAGTATGTCGCCTCTATGGAAACCACGGCTAATAATCCTGGTGCTGCCGGCGGCGCGATGATTACCGTGAC TGCCCAAAACATTGCTTCCGATGCAAATGGCGGGGTGTCTTTGGCGCCTTGCAGCACGGCTGCTACAACTTTTGGAACCT GCTTGCAACCTGCGTTGGCTTCGACGGTTAATAGCTGGGTTTGCGGTCCTGCAGCGTCTGGTGGTGTTAATCCCAAGTTC TTGCCTGGTTCTTGCCGCACCGGCCAATAA
Upstream 100 bases:
>100_bases GACTGGTTAAAAAGCAGGAAAAAGTTCTCGAATTGGAGGCTTTGGCGAGCTGGCCCGAAACCTGCTCTATTTCATTGCTT TTTCAACCAAGGAGTTTTCA
Downstream 100 bases:
>100_bases GCTCGGATGATTCAAAAAGCGGCTCCGGCCGCTTTTTTTTATGACAGCTTCACGTTTCCATGCCTTCGGGGTTCTTTGTC TTGCGTGGGCCTGGCTGGCG
Product: methylation
Products: NA
Alternate protein names: Pilin [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKRSMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQSAASGSTIAANGWGCEVSTG SGTKYVASMETTANNPGAAGGAMITVTAQNIASDANGGVSLAPCSTAATTFGTCLQPALASTVNSWVCGPAASGGVNPKF LPGSCRTGQ
Sequences:
>Translated_169_residues MKRSMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQSAASGSTIAANGWGCEVSTG SGTKYVASMETTANNPGAAGGAMITVTAQNIASDANGGVSLAPCSTAATTFGTCLQPALASTVNSWVCGPAASGGVNPKF LPGSCRTGQ >Mature_169_residues MKRSMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQSAASGSTIAANGWGCEVSTG SGTKYVASMETTANNPGAAGGAMITVTAQNIASDANGGVSLAPCSTAATTFGTCLQPALASTVNSWVCGPAASGGVNPKF LPGSCRTGQ
Specific function: This protein is the predominant Neisseria surface antigen, which allows adhesion of the bacterium to various host cells [H]
COG id: COG4969
COG function: function code NU; Tfp pilus assembly protein, major pilin PilA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-Me-Phe pilin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001082 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]
EC number: NA
Molecular weight: Translated: 16931; Mature: 16931
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAASGSTIAANGWGCEVSTGSGTKYVASMETTANNPGAAGGAMITVTAQNIASDANGGVS HHCCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCEE LAPCSTAATTFGTCLQPALASTVNSWVCGPAASGGVNPKFLPGSCRTGQ ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRSMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAASGSTIAANGWGCEVSTGSGTKYVASMETTANNPGAAGGAMITVTAQNIASDANGGVS HHCCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCEE LAPCSTAATTFGTCLQPALASTVNSWVCGPAASGGVNPKFLPGSCRTGQ ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3141743; 10710307; 8645220; 8993351; 9515697 [H]