| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790478
Identifier: 91790478
GI number: 91790478
Start: 4934811
End: 4935503
Strand: Direct
Name: 91790478
Synonym: Bpro_4649
Alternate gene names: NA
Gene position: 4934811-4935503 (Clockwise)
Preceding gene: 91790477
Following gene: 91790485
Centisome position: 94.9
GC content: 68.69
Gene sequence:
>693_bases ATGACCCACGCCCCACATCCTTCCCGGCTTTCCTTCCTCATGCGGTTTTTCCTCGCGTTCCTGACGCTGCTGGGCCCCGC CCTGCATGCGCAGCCCGCGGGGTATTCGAACACGAACCCGGATCCCCTGCCGATGCGCAACCTGCAGATCGAGGTGCGTC AGGTACGGGGCGGCAGCCAGGCCCAGGGCATGGTGGGCGCCCAGGGCGGCGTGCTGCTGCAACCGGGCCATTCCGGCGCC ACAGTCAACATCACCGCGCAAAGCAGCCAGCGCAGCGACGCGCGCGACCTGGTGCAGCGGGTGCTGGTGCTCAACGGCCG TCCCGTCGCCATCAACCTGGGCAACACCACGCCGCTGCGGCTGACGCAGGCCTTTGTGCAGAACGGCGTGTTGCGCTACG TGGGAAGCACCGTGCTGATCGACACCAACAGCGGCTTTTCAGCACGGCCCGTCTGGCGCGGCGGCAGCAGCGCGGAGCTT GAGCTGGCCGCCATGCAATCGCGTCCTGGCACGGCCGGGGCAGTGCCGTCTTCGTCGTCCGCCAGCACCTCGGTGGCCTT GGTGCTGGGTGAATGGGTCACCGTGGCGCAATCGGATGATGCGGCGACGGCCAACAGCAGCGGCGTGGCCGGCGCTGGGC AGACTTCAGGCCAGGAGGCCCTGACAGTCGAGGTGCGGATCTCCGTGCGCTAG
Upstream 100 bases:
>100_bases ATATTGACCGGATCACAAGCTACTAATTTCATAGCAAAATATCCTGAACCGACACCTTCTCGCGCCAACCCACCGCAGCG CTACTCACGGCGCGACTCCC
Downstream 100 bases:
>100_bases GCGCCCCACGTCAAGCGCCCTGGGGCTCAATCCCGCACACAGCGCGCGGCCAGCGGCAACAGCGGATAGCGCAGCACGGC CTCGCGCCCGCTGGCGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTHAPHPSRLSFLMRFFLAFLTLLGPALHAQPAGYSNTNPDPLPMRNLQIEVRQVRGGSQAQGMVGAQGGVLLQPGHSGA TVNITAQSSQRSDARDLVQRVLVLNGRPVAINLGNTTPLRLTQAFVQNGVLRYVGSTVLIDTNSGFSARPVWRGGSSAEL ELAAMQSRPGTAGAVPSSSSASTSVALVLGEWVTVAQSDDAATANSSGVAGAGQTSGQEALTVEVRISVR
Sequences:
>Translated_230_residues MTHAPHPSRLSFLMRFFLAFLTLLGPALHAQPAGYSNTNPDPLPMRNLQIEVRQVRGGSQAQGMVGAQGGVLLQPGHSGA TVNITAQSSQRSDARDLVQRVLVLNGRPVAINLGNTTPLRLTQAFVQNGVLRYVGSTVLIDTNSGFSARPVWRGGSSAEL ELAAMQSRPGTAGAVPSSSSASTSVALVLGEWVTVAQSDDAATANSSGVAGAGQTSGQEALTVEVRISVR >Mature_229_residues THAPHPSRLSFLMRFFLAFLTLLGPALHAQPAGYSNTNPDPLPMRNLQIEVRQVRGGSQAQGMVGAQGGVLLQPGHSGAT VNITAQSSQRSDARDLVQRVLVLNGRPVAINLGNTTPLRLTQAFVQNGVLRYVGSTVLIDTNSGFSARPVWRGGSSAELE LAAMQSRPGTAGAVPSSSSASTSVALVLGEWVTVAQSDDAATANSSGVAGAGQTSGQEALTVEVRISVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23867; Mature: 23736
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAPHPSRLSFLMRFFLAFLTLLGPALHAQPAGYSNTNPDPLPMRNLQIEVRQVRGGSQ CCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC AQGMVGAQGGVLLQPGHSGATVNITAQSSQRSDARDLVQRVLVLNGRPVAINLGNTTPLR CCCEEECCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHH LTQAFVQNGVLRYVGSTVLIDTNSGFSARPVWRGGSSAELELAAMQSRPGTAGAVPSSSS HHHHHHHCCCEECCCCEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC ASTSVALVLGEWVTVAQSDDAATANSSGVAGAGQTSGQEALTVEVRISVR CCCEEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure THAPHPSRLSFLMRFFLAFLTLLGPALHAQPAGYSNTNPDPLPMRNLQIEVRQVRGGSQ CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC AQGMVGAQGGVLLQPGHSGATVNITAQSSQRSDARDLVQRVLVLNGRPVAINLGNTTPLR CCCEEECCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHH LTQAFVQNGVLRYVGSTVLIDTNSGFSARPVWRGGSSAELELAAMQSRPGTAGAVPSSSS HHHHHHHCCCEECCCCEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC ASTSVALVLGEWVTVAQSDDAATANSSGVAGAGQTSGQEALTVEVRISVR CCCEEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA