| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is smg [H]
Identifier: 91790471
GI number: 91790471
Start: 4923480
End: 4923998
Strand: Direct
Name: smg [H]
Synonym: Bpro_4642
Alternate gene names: 91790471
Gene position: 4923480-4923998 (Clockwise)
Preceding gene: 91790470
Following gene: 91790477
Centisome position: 94.68
GC content: 57.23
Gene sequence:
>519_bases ATGTTTGAAGTACTGGTGTACGTTTACGAGAATTACTGGCAAGGTGATGCCTGCCCCGAACTTCAAAAACTGGGGCGCAA ACTCACCGCGGCAGGATTCGATGCCGAAGAGATCCAGGCGGCCCTGGTATGGCTTGAGGGCCTGAATACGGCGGCCCAAG GCACGCAGATCAACCTTCCCGCCAAGACTTCTTCCGGCCTTGCTGACGTCACGATTGCTGCCTCTGCCCTCTTTCAGCCG CAGTCGGCCAACAGCCTGCGAATTTTTTCGGTGTCCGAGCAGATGCATCTGGGTGCCCAATGCCTGGGATTCATCAATTT CCTGGAGACCTCGGGCGTTCTGCCTCCGCACATGCGGGAGATTGTCATTGACCGCGCGATGGCAGCTCCGGGTGACCCGG TCACGCTGGATGACCTGAAAATTATCGTCCTGATGGTGTACTGGAGTTTTGGCGAGGAGCCCGATGCACTGGTTCTTGAC GAATTGTGCGACGACACGGAAGGTCGGCTTGCGCACTGA
Upstream 100 bases:
>100_bases TTGGTTCCATCAAGCATGCAACACTGCACTAGTCGGGCAATTCCCCCACCATCCAACGAGGGTTGACACCGGCGCACGTA TCTGCGTTATATTGAGGCAT
Downstream 100 bases:
>100_bases GTGGCTGAGGCCCCCACGGTTGCTCACTGCGTGTAGCTCCCTGCCCCCCCGAGGGGGCCGCTGCGCCTGCGGCCCGGCTA AGCCGGTTCCGCGGCCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MFEVLVYVYENYWQGDACPELQKLGRKLTAAGFDAEEIQAALVWLEGLNTAAQGTQINLPAKTSSGLADVTIAASALFQP QSANSLRIFSVSEQMHLGAQCLGFINFLETSGVLPPHMREIVIDRAMAAPGDPVTLDDLKIIVLMVYWSFGEEPDALVLD ELCDDTEGRLAH
Sequences:
>Translated_172_residues MFEVLVYVYENYWQGDACPELQKLGRKLTAAGFDAEEIQAALVWLEGLNTAAQGTQINLPAKTSSGLADVTIAASALFQP QSANSLRIFSVSEQMHLGAQCLGFINFLETSGVLPPHMREIVIDRAMAAPGDPVTLDDLKIIVLMVYWSFGEEPDALVLD ELCDDTEGRLAH >Mature_172_residues MFEVLVYVYENYWQGDACPELQKLGRKLTAAGFDAEEIQAALVWLEGLNTAAQGTQINLPAKTSSGLADVTIAASALFQP QSANSLRIFSVSEQMHLGAQCLGFINFLETSGVLPPHMREIVIDRAMAAPGDPVTLDDLKIIVLMVYWSFGEEPDALVLD ELCDDTEGRLAH
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family [H]
Homologues:
Organism=Escherichia coli, GI1789679, Length=154, Percent_Identity=38.3116883116883, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007456 [H]
Pfam domain/function: PF04361 DUF494 [H]
EC number: NA
Molecular weight: Translated: 18772; Mature: 18772
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVLVYVYENYWQGDACPELQKLGRKLTAAGFDAEEIQAALVWLEGLNTAAQGTQINLP CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECC AKTSSGLADVTIAASALFQPQSANSLRIFSVSEQMHLGAQCLGFINFLETSGVLPPHMRE CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH IVIDRAMAAPGDPVTLDDLKIIVLMVYWSFGEEPDALVLDELCDDTEGRLAH HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFEVLVYVYENYWQGDACPELQKLGRKLTAAGFDAEEIQAALVWLEGLNTAAQGTQINLP CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECC AKTSSGLADVTIAASALFQPQSANSLRIFSVSEQMHLGAQCLGFINFLETSGVLPPHMRE CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH IVIDRAMAAPGDPVTLDDLKIIVLMVYWSFGEEPDALVLDELCDDTEGRLAH HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA