| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ygaZ [C]
Identifier: 91790466
GI number: 91790466
Start: 4918247
End: 4919014
Strand: Reverse
Name: ygaZ [C]
Synonym: Bpro_4637
Alternate gene names: 91790466
Gene position: 4919014-4918247 (Counterclockwise)
Preceding gene: 91790467
Following gene: 91790465
Centisome position: 94.59
GC content: 66.54
Gene sequence:
>768_bases GTGAGTTCATTGTTCAAGCACCCGGAGTTTCGGGTGGGTGTGCGCGACCTGGCTCCAGTCGCGCCCGGTATTGCCGCCTG GGGACTGATGACCGGGGTGGCGATGATCAAGTCGGGCCTGAGCCTGACCGAAGCACTGCTCATGGGGGTACTGGTTTTTG CCGGGAGTTCGCAGCTGGCGGCCGTTCCCCTGATTGCCGTCGGTGCGCCCATGTGGGTCATCCTGGCCACGGCGTTTTGC GTCAACCTGCGTTTTGTGGTGTTCAGCGCGCACCTGCGCCCCTACGTGATGCACCAGAACATCTGGCGCCGCATGCTCAG CGGCTACCTGACGGCCGATCTCAGCTATGTGCTGTTCACCAGGCGCTTTCCGCATCCCACGACGGATCCGGTCGCCCGGC GTGCGCAGGAGGCGTACCTGGCCGGTAACTCGGCCATCAACTGGGCCAGCTGGGTGGGCGCCAGCCTGCTCGGCATTGCG CTGGCCAACGCCATTCCGCTGTCGTGGGGGCTGGGCTTTGCCGGCATCCTGGCGCTGCTCGGCATCCTGTGTTCGCTGGC CACCACGCGGCTGCGCGTCGTGTCTGCCGGGGTGGCTGGTGCGGCTGCCGTCGCGGCTTTTGCCCTGCCGCTCAAGCTCA ACATCCTGGTGGCCATCGCGGCGGCGGTGGCGGTCTGCCTGATGCTGGAAAAGCCGGTGCGGGCCCGGACTGCCTCGCCC AAGCCCGCGAAATCGGGTGAAGCTGGTGAAACGGGAGGAGCGGTATGA
Upstream 100 bases:
>100_bases AAAGCGGGCGGCAAGGCGCTGGAGGCGGCCGATTTTCTGCGCGGGTTCGAGATCCGTCCCGGCATGGTGTTCAATCCCAC TCAGACGGAATGAGGTTTTT
Downstream 100 bases:
>100_bases GCAAGACCGATCTCTGGACCGTGGCCACCATCGTCGGCATGGCGCTGATGACCGTGATCACCCGCTCCTTCTTTTTTCTC TCCAGCAAACCCTGGACTTT
Product: AzlC-like protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; AzlC-Like; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like Protein; AzlC Family Branched-Chain Amino Acid Transporter; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein; AzlC-Like Family Protein; AzlC Protein; Inner Membrane Protein YgaZ; Azaleucine Resistance Protein AzlC; Amino Acid Transporter; Azlc Family Protein; Branched Chain Amino Acid Exporter Family Protein; Integral Membrane Protein; AzlC Family; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSSLFKHPEFRVGVRDLAPVAPGIAAWGLMTGVAMIKSGLSLTEALLMGVLVFAGSSQLAAVPLIAVGAPMWVILATAFC VNLRFVVFSAHLRPYVMHQNIWRRMLSGYLTADLSYVLFTRRFPHPTTDPVARRAQEAYLAGNSAINWASWVGASLLGIA LANAIPLSWGLGFAGILALLGILCSLATTRLRVVSAGVAGAAAVAAFALPLKLNILVAIAAAVAVCLMLEKPVRARTASP KPAKSGEAGETGGAV
Sequences:
>Translated_255_residues MSSLFKHPEFRVGVRDLAPVAPGIAAWGLMTGVAMIKSGLSLTEALLMGVLVFAGSSQLAAVPLIAVGAPMWVILATAFC VNLRFVVFSAHLRPYVMHQNIWRRMLSGYLTADLSYVLFTRRFPHPTTDPVARRAQEAYLAGNSAINWASWVGASLLGIA LANAIPLSWGLGFAGILALLGILCSLATTRLRVVSAGVAGAAAVAAFALPLKLNILVAIAAAVAVCLMLEKPVRARTASP KPAKSGEAGETGGAV >Mature_254_residues SSLFKHPEFRVGVRDLAPVAPGIAAWGLMTGVAMIKSGLSLTEALLMGVLVFAGSSQLAAVPLIAVGAPMWVILATAFCV NLRFVVFSAHLRPYVMHQNIWRRMLSGYLTADLSYVLFTRRFPHPTTDPVARRAQEAYLAGNSAINWASWVGASLLGIAL ANAIPLSWGLGFAGILALLGILCSLATTRLRVVSAGVAGAAAVAAFALPLKLNILVAIAAAVAVCLMLEKPVRARTASPK PAKSGEAGETGGAV
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26586; Mature: 26455
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLFKHPEFRVGVRDLAPVAPGIAAWGLMTGVAMIKSGLSLTEALLMGVLVFAGSSQLA CCCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH AVPLIAVGAPMWVILATAFCVNLRFVVFSAHLRPYVMHQNIWRRMLSGYLTADLSYVLFT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRFPHPTTDPVARRAQEAYLAGNSAINWASWVGASLLGIALANAIPLSWGLGFAGILALL HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH GILCSLATTRLRVVSAGVAGAAAVAAFALPLKLNILVAIAAAVAVCLMLEKPVRARTASP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC KPAKSGEAGETGGAV CCCCCCCCCCCCCCC >Mature Secondary Structure SSLFKHPEFRVGVRDLAPVAPGIAAWGLMTGVAMIKSGLSLTEALLMGVLVFAGSSQLA CCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH AVPLIAVGAPMWVILATAFCVNLRFVVFSAHLRPYVMHQNIWRRMLSGYLTADLSYVLFT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRFPHPTTDPVARRAQEAYLAGNSAINWASWVGASLLGIALANAIPLSWGLGFAGILALL HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH GILCSLATTRLRVVSAGVAGAAAVAAFALPLKLNILVAIAAAVAVCLMLEKPVRARTASP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC KPAKSGEAGETGGAV CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA