| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is pykA [H]
Identifier: 91790463
GI number: 91790463
Start: 4914754
End: 4916187
Strand: Reverse
Name: pykA [H]
Synonym: Bpro_4634
Alternate gene names: 91790463
Gene position: 4916187-4914754 (Counterclockwise)
Preceding gene: 91790464
Following gene: 91790461
Centisome position: 94.54
GC content: 63.25
Gene sequence:
>1434_bases ATGCCAAGTCGCGCTACCAAGATCGTTGTCACCCTCGGGCCCGCTTCCAGCGACCCTGTCCTGCTGGAAAAAATGATTCG CGCAGGTGTCAATGTGGTGCGCCTGAATTTCAGCCATGGCACGGCGCAGGACCATGTCGACCGGGCAAAGCTGGTGCGCG AAGCCGCCCAGCGCGCCGGCCGTGAAGTGGCCATCATGGCCGACCTGCAGGGCCCGAAAATCCGTGTCGGCAAATTTGCC GAAGGCAAGGTGCGGCTCGAGGCCGGCGAGAAATTCATCCTCGATGCCTCCCGCACCGAACCCGGCGACCTCAAGGGTGT GGGTCTGGACTACAAAGAGCTGCCGCGGGATGTGAAGGCGGGCGATGTGCTGCTGCTCAACGACGGCCTGATTGTGCTGA CGGTGGAGGCGGTGCGCGGCGAGGAAGTGCACACCATCGTCAAGCTCGGCGGCGACCTGTCCAACAACAAGGGCATCAAC AAGCAGGGCGGCGGCCTGACGGCCCCCGCGCTGACGGCCAAGGACATGGAAGACATCAAGACCGCGATGAGCTTTCGGGC CGACTATGTGGCCGTGAGCTTTCCAAAAAATGCCACCGACATGGAAATGGCGCGCCAGCTGTGCGATGTGGCGGCCGCGC CCTACAAGCACAAGCCCGGCCTGATCGCCAAGATCGAGCGGGCCGAAGCCATTCCCAAGCTGGAAGAAATCCTGCGCGTC AGTGACGCCATCATGGTGGCCCGCGGCGACCTGGCGATTGAAGTGGGCAACGCGGCAGTGCCGGCCCTGCAAAAACGCAT GATCAAGATGGCCCGGGCGCTCGACAAGGTCGTCATCACTGCCACGCAGATGATGGAAAGCATGATCGTCAATCCGGTAC CCACGCGCGCCGAGGTCAGCGACGTGGCCAATGCCGTGCTCGACGGCAGCGACGCGGTGATGCTCAGCGCCGAAACCGCA GCCGGCAAATATCCGCTCGAGACGGTGGAGGAAATGGCCAAGATTTGCGAGGAAGCCGAGAAAGCCGAGTACAAGGAACT GGAAGCGGACTTCACCGGCAAGACCTTCACCCGTATCGACCAATCGATTGCCATGGGCACCCTGTTCACGGCCCACCACC TGGGGGCCAAGGCGATCGTGGCGCTGACGGACAGCGGCTCCACGCCTCTCTGGATGAGCCGCCATGACATCCGCGTACCC ATCTATGCCCTGACCCCGCACCTGGCCACGCAGCGCAGGATGGCGCTTTACCGCAATGTGCGTCCCCTGCTCATGGACAC CAGCGCCGACCGCGACACCGCTCTGGCACAGGCCGAAGGCCACCTGCTGCGCCGCAATATCGTGCAGAGTGGCGACGTGT ATGCCATCACCTGCGGTGAGCCGATGGGTGCGCCCGGCGGTACCAACATGCTCAAGATCTGCAGAGTAGCTTAG
Upstream 100 bases:
>100_bases AGGGGGCTGCGATCCCGCAAGCCCGCGTGCGCGCCGCAGTTGGTACCGGTTTGGTAACTTTTTCGTGTGAAAATCGGGAA CTAAATTACAGGAGACATTC
Downstream 100 bases:
>100_bases CCCCCACGCTCCCCCACTTCGTGTGGGTCGCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGCGAAGCCAGTCCCG CGGCCCCTGCTGGGATCTAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MPSRATKIVVTLGPASSDPVLLEKMIRAGVNVVRLNFSHGTAQDHVDRAKLVREAAQRAGREVAIMADLQGPKIRVGKFA EGKVRLEAGEKFILDASRTEPGDLKGVGLDYKELPRDVKAGDVLLLNDGLIVLTVEAVRGEEVHTIVKLGGDLSNNKGIN KQGGGLTAPALTAKDMEDIKTAMSFRADYVAVSFPKNATDMEMARQLCDVAAAPYKHKPGLIAKIERAEAIPKLEEILRV SDAIMVARGDLAIEVGNAAVPALQKRMIKMARALDKVVITATQMMESMIVNPVPTRAEVSDVANAVLDGSDAVMLSAETA AGKYPLETVEEMAKICEEAEKAEYKELEADFTGKTFTRIDQSIAMGTLFTAHHLGAKAIVALTDSGSTPLWMSRHDIRVP IYALTPHLATQRRMALYRNVRPLLMDTSADRDTALAQAEGHLLRRNIVQSGDVYAITCGEPMGAPGGTNMLKICRVA
Sequences:
>Translated_477_residues MPSRATKIVVTLGPASSDPVLLEKMIRAGVNVVRLNFSHGTAQDHVDRAKLVREAAQRAGREVAIMADLQGPKIRVGKFA EGKVRLEAGEKFILDASRTEPGDLKGVGLDYKELPRDVKAGDVLLLNDGLIVLTVEAVRGEEVHTIVKLGGDLSNNKGIN KQGGGLTAPALTAKDMEDIKTAMSFRADYVAVSFPKNATDMEMARQLCDVAAAPYKHKPGLIAKIERAEAIPKLEEILRV SDAIMVARGDLAIEVGNAAVPALQKRMIKMARALDKVVITATQMMESMIVNPVPTRAEVSDVANAVLDGSDAVMLSAETA AGKYPLETVEEMAKICEEAEKAEYKELEADFTGKTFTRIDQSIAMGTLFTAHHLGAKAIVALTDSGSTPLWMSRHDIRVP IYALTPHLATQRRMALYRNVRPLLMDTSADRDTALAQAEGHLLRRNIVQSGDVYAITCGEPMGAPGGTNMLKICRVA >Mature_476_residues PSRATKIVVTLGPASSDPVLLEKMIRAGVNVVRLNFSHGTAQDHVDRAKLVREAAQRAGREVAIMADLQGPKIRVGKFAE GKVRLEAGEKFILDASRTEPGDLKGVGLDYKELPRDVKAGDVLLLNDGLIVLTVEAVRGEEVHTIVKLGGDLSNNKGINK QGGGLTAPALTAKDMEDIKTAMSFRADYVAVSFPKNATDMEMARQLCDVAAAPYKHKPGLIAKIERAEAIPKLEEILRVS DAIMVARGDLAIEVGNAAVPALQKRMIKMARALDKVVITATQMMESMIVNPVPTRAEVSDVANAVLDGSDAVMLSAETAA GKYPLETVEEMAKICEEAEKAEYKELEADFTGKTFTRIDQSIAMGTLFTAHHLGAKAIVALTDSGSTPLWMSRHDIRVPI YALTPHLATQRRMALYRNVRPLLMDTSADRDTALAQAEGHLLRRNIVQSGDVYAITCGEPMGAPGGTNMLKICRVA
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=498, Percent_Identity=37.7510040160643, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI33286420, Length=498, Percent_Identity=37.7510040160643, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI10835121, Length=498, Percent_Identity=37.3493975903614, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI32967597, Length=497, Percent_Identity=37.0221327967807, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI33286418, Length=498, Percent_Identity=37.7510040160643, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI310128732, Length=294, Percent_Identity=37.0748299319728, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI310128730, Length=294, Percent_Identity=37.0748299319728, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI310128736, Length=242, Percent_Identity=34.7107438016529, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310128734, Length=242, Percent_Identity=34.7107438016529, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310128738, Length=218, Percent_Identity=34.4036697247706, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=51.0460251046025, Blast_Score=436, Evalue=1e-123, Organism=Escherichia coli, GI1787965, Length=466, Percent_Identity=38.1974248927039, Blast_Score=289, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=37.8099173553719, Blast_Score=272, Evalue=3e-73, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=36.8312757201646, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=36.8312757201646, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=36.8312757201646, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=36.8312757201646, Blast_Score=242, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6319279, Length=491, Percent_Identity=34.2158859470468, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324923, Length=435, Percent_Identity=35.1724137931034, Blast_Score=218, Evalue=2e-57, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=38.3367139959432, Blast_Score=269, Evalue=4e-72, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=38.3367139959432, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24648966, Length=438, Percent_Identity=36.7579908675799, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24581235, Length=487, Percent_Identity=31.8275154004107, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24646914, Length=275, Percent_Identity=38.1818181818182, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51423; Mature: 51292
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRATKIVVTLGPASSDPVLLEKMIRAGVNVVRLNFSHGTAQDHVDRAKLVREAAQRAG CCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC REVAIMADLQGPKIRVGKFAEGKVRLEAGEKFILDASRTEPGDLKGVGLDYKELPRDVKA CEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCC GDVLLLNDGLIVLTVEAVRGEEVHTIVKLGGDLSNNKGINKQGGGLTAPALTAKDMEDIK CCEEEEECCEEEEEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TAMSFRADYVAVSFPKNATDMEMARQLCDVAAAPYKHKPGLIAKIERAEAIPKLEEILRV HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCHHHHHHHHH SDAIMVARGDLAIEVGNAAVPALQKRMIKMARALDKVVITATQMMESMIVNPVPTRAEVS HHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH DVANAVLDGSDAVMLSAETAAGKYPLETVEEMAKICEEAEKAEYKELEADFTGKTFTRID HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QSIAMGTLFTAHHLGAKAIVALTDSGSTPLWMSRHDIRVPIYALTPHLATQRRMALYRNV HHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHCC RPLLMDTSADRDTALAQAEGHLLRRNIVQSGDVYAITCGEPMGAPGGTNMLKICRVA CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHEECC >Mature Secondary Structure PSRATKIVVTLGPASSDPVLLEKMIRAGVNVVRLNFSHGTAQDHVDRAKLVREAAQRAG CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC REVAIMADLQGPKIRVGKFAEGKVRLEAGEKFILDASRTEPGDLKGVGLDYKELPRDVKA CEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCC GDVLLLNDGLIVLTVEAVRGEEVHTIVKLGGDLSNNKGINKQGGGLTAPALTAKDMEDIK CCEEEEECCEEEEEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TAMSFRADYVAVSFPKNATDMEMARQLCDVAAAPYKHKPGLIAKIERAEAIPKLEEILRV HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCHHHHHHHHH SDAIMVARGDLAIEVGNAAVPALQKRMIKMARALDKVVITATQMMESMIVNPVPTRAEVS HHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH DVANAVLDGSDAVMLSAETAAGKYPLETVEEMAKICEEAEKAEYKELEADFTGKTFTRID HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QSIAMGTLFTAHHLGAKAIVALTDSGSTPLWMSRHDIRVPIYALTPHLATQRRMALYRNV HHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHCC RPLLMDTSADRDTALAQAEGHLLRRNIVQSGDVYAITCGEPMGAPGGTNMLKICRVA CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]