| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is cbbA [H]
Identifier: 91790459
GI number: 91790459
Start: 4910494
End: 4911558
Strand: Reverse
Name: cbbA [H]
Synonym: Bpro_4630
Alternate gene names: 91790459
Gene position: 4911558-4910494 (Counterclockwise)
Preceding gene: 91790460
Following gene: 91790458
Centisome position: 94.45
GC content: 62.63
Gene sequence:
>1065_bases ATGGCACTCGTTTCGATGCGCGAGCTGCTGGACCATGCGGCAGTCAACACGTATGGCATTCCGGCTTTCAACGTCAACAA CCTTGAGCAGGTCACCGCCATCATGCAGGCGGCGGACGAAGTCAACGCCCCGGTGATCATGCAGGCCAGCGCCGGTGCGC GCAAGTATGCCGGCGAAGGTTTCCTGAAGCACCTGATCCAGGCCGCTGTCGAGAGTTTTCCGCACATCCCCGTGGTGATG CACCAGGACCATGGCCAGAGCCCCGATGTGTGCCTGGGCGCCATCAAGCTGGGCTTCAGCTCGGTCATGATGGACGGCTC GCTGATGGCCGACGGCAAGACCATTGCCGACTACGACTACAACATCGATGTCACCCGCAAGGTGGTTGAAATGGCCCATG CGACCGGCGTCTCGGTCGAGGGCGAGCTCGGTTGCCTGGGCAGCCTGGAAACCATGCAGGGCGACAAGGAAGATGGCCAT GGCACCGATGCCGTCATGACGCACGACCAGCTGCTGACCGACCCCGAGCAGGCGGCCGATTTCGTCAAGCGCACCCAGCT GGATGCGCTGGCCATTGCCATCGGCACCAGTCACGGCGCCTACAAGTTCACGCGCAAGCCCACCGGTGACATCCTGGCCA TCGAGCGCATCAAGGAAATCCACCGCCGCATCCCCAACACCCACCTGGTGATGCACGGCTCGTCCAGCGTGCCGCAGGAC CTGCTGGCCATCATCCGCAACTACGGCGGCGACATGAAGGAAACCTACGGCGTGCCCGTGGAAGAAATCCAGAAGGCCAT CAAGTTCGGCGTGCGCAAGATCAACATCGACACCGACATCCGCCTGGCGATGACAGCTGCCACGCGCAAATTCATGGCCG AGAACCCCAGCAAATTCGACCCGCGCGAATGGCTCAAGCCGGCCACCGCCGCCGCCAAGGCCATCTGCAAGCAGCGTTAC ATCGAGTTCGGCTGCGAGGGCCAGGCCAGCAAGATCAAGGGCGAGAGCCTGTCGGTCGTGGCGGCCAAATACGCCAAGGG CGAACTGGCCCAGGTCGTGCATTAA
Upstream 100 bases:
>100_bases TTACTTCGCGGTTACAGCCCCTGAACACAGCGCCTGCGCTGTCTGGCGGCCGCAGGACCCACCGTTTTTTACAGTGTTTT AACTTTCTGGGGATTCGAAC
Downstream 100 bases:
>100_bases GGCAACTGTCGCTGCCTGTTTTCGCCCCTTTTCCGTCTTTTTCCGCTTTCCCGCCTTCTCCGGATTGGCGATAATTCAAA GCCCGTGCATGCCTTGAGCC
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MALVSMRELLDHAAVNTYGIPAFNVNNLEQVTAIMQAADEVNAPVIMQASAGARKYAGEGFLKHLIQAAVESFPHIPVVM HQDHGQSPDVCLGAIKLGFSSVMMDGSLMADGKTIADYDYNIDVTRKVVEMAHATGVSVEGELGCLGSLETMQGDKEDGH GTDAVMTHDQLLTDPEQAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIERIKEIHRRIPNTHLVMHGSSSVPQD LLAIIRNYGGDMKETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTAATRKFMAENPSKFDPREWLKPATAAAKAICKQRY IEFGCEGQASKIKGESLSVVAAKYAKGELAQVVH
Sequences:
>Translated_354_residues MALVSMRELLDHAAVNTYGIPAFNVNNLEQVTAIMQAADEVNAPVIMQASAGARKYAGEGFLKHLIQAAVESFPHIPVVM HQDHGQSPDVCLGAIKLGFSSVMMDGSLMADGKTIADYDYNIDVTRKVVEMAHATGVSVEGELGCLGSLETMQGDKEDGH GTDAVMTHDQLLTDPEQAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIERIKEIHRRIPNTHLVMHGSSSVPQD LLAIIRNYGGDMKETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTAATRKFMAENPSKFDPREWLKPATAAAKAICKQRY IEFGCEGQASKIKGESLSVVAAKYAKGELAQVVH >Mature_353_residues ALVSMRELLDHAAVNTYGIPAFNVNNLEQVTAIMQAADEVNAPVIMQASAGARKYAGEGFLKHLIQAAVESFPHIPVVMH QDHGQSPDVCLGAIKLGFSSVMMDGSLMADGKTIADYDYNIDVTRKVVEMAHATGVSVEGELGCLGSLETMQGDKEDGHG TDAVMTHDQLLTDPEQAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIERIKEIHRRIPNTHLVMHGSSSVPQDL LAIIRNYGGDMKETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTAATRKFMAENPSKFDPREWLKPATAAAKAICKQRYI EFGCEGQASKIKGESLSVVAAKYAKGELAQVVH
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=32.5227963525836, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI1789526, Length=319, Percent_Identity=31.0344827586207, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI1788072, Length=341, Percent_Identity=29.6187683284457, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1789293, Length=370, Percent_Identity=24.3243243243243, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38418; Mature: 38286
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVSMRELLDHAAVNTYGIPAFNVNNLEQVTAIMQAADEVNAPVIMQASAGARKYAGEG CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCH FLKHLIQAAVESFPHIPVVMHQDHGQSPDVCLGAIKLGFSSVMMDGSLMADGKTIADYDY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCC NIDVTRKVVEMAHATGVSVEGELGCLGSLETMQGDKEDGHGTDAVMTHDQLLTDPEQAAD CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECHHHHCCHHHHHH FVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIERIKEIHRRIPNTHLVMHGSSSVPQD HHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAIIRNYGGDMKETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTAATRKFMAENPSKFD HHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCEEEHHHHHHHHHHHCCCCCCC PREWLKPATAAAKAICKQRYIEFGCEGQASKIKGESLSVVAAKYAKGELAQVVH HHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHCC >Mature Secondary Structure ALVSMRELLDHAAVNTYGIPAFNVNNLEQVTAIMQAADEVNAPVIMQASAGARKYAGEG CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCH FLKHLIQAAVESFPHIPVVMHQDHGQSPDVCLGAIKLGFSSVMMDGSLMADGKTIADYDY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCC NIDVTRKVVEMAHATGVSVEGELGCLGSLETMQGDKEDGHGTDAVMTHDQLLTDPEQAAD CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECHHHHCCHHHHHH FVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIERIKEIHRRIPNTHLVMHGSSSVPQD HHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAIIRNYGGDMKETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTAATRKFMAENPSKFD HHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCEEEHHHHHHHHHHHCCCCCCC PREWLKPATAAAKAICKQRYIEFGCEGQASKIKGESLSVVAAKYAKGELAQVVH HHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550527 [H]