| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is purC [H]
Identifier: 91790458
GI number: 91790458
Start: 4909443
End: 4910351
Strand: Reverse
Name: purC [H]
Synonym: Bpro_4629
Alternate gene names: 91790458
Gene position: 4910351-4909443 (Counterclockwise)
Preceding gene: 91790459
Following gene: 91790456
Centisome position: 94.43
GC content: 64.91
Gene sequence:
>909_bases ATGACTGCTGCGCTCCACACCTCCGCTCTGACTTCCCTGCCCCTGCTTGCCCGCGGCAAGGTGCGCGACAACTACGCCGT GGGCCAAGACCGGCTGCTGATGGTGGCCAGCGACCGCCTGAGCGCGTTTGATGTGATCCTGGGCGAGCCGATTCCCGGCA AGGGCGCGCTGCTCACCCAGATGGCGCTGTTCTGGTTTGCCAAGCTGGGCCACCTCTGCCCCAACCACCTCACGGGCGAG GCGCCCGAGAGCGTGGTCACGGCCGCGGAGCTGCCCCAGGTCACCGGCCGGTCCATGCTGGTCAAGCGCCTCAAGCCCTT GCCGGTGGAAGCCGTGGTGCGCGGCTACCTGGCTGGCAGCGGCTGGAAGGAATACCAGGAGAGCCAGTCCGTCTGCGGCG TACCGCTGCCTGCCGGTCTGAAAAACGCCGGCAAATTGCCGGAGCCCATCTTCACGCCGGCCGCCAAGGCCGAGGTCGGC GAGCATGACGAGAACATCAGCTACGAGCAGGTGGAGAAGGTGGTGGGCCCCGAGCTTGCCGCGCAGATCAAGAAGATCAG CATCGAAATTTACAAGACCGCGGCGGCCTTTGCGCTGACCAAGGGCATCATCATTGCCGACACCAAGTTCGAGTTCGGCC TGGACGAAAACGGCACGCTGACGCTGATGGACGAGGTGCTGACACCCGATTCGTCACGCTACTGGCCCATCGAAGGCTAC GAAGCCGCCTATGCAGCCGGGCTGAACCCGCCCAGCTATGACAAGCAGTTCGTGCGCGACTGGCTGGAGGCCGTGCGCAT CAACGGCAAGCCCTGGGACAAGACCCCGCCCTCGCCGCAGCTACCGCCCGATGTGGTGGCAAAAACCGCGGCCAAATATC AGGAGGCTTTAACCCGCTTGGCGGGTTAA
Upstream 100 bases:
>100_bases CCGCTTTCCCGCCTTCTCCGGATTGGCGATAATTCAAAGCCCGTGCATGCCTTGAGCCGCGCGGGCTTTTTCACTTTTCC ACCCACCAAGACACCAAGCA
Downstream 100 bases:
>100_bases AGAGCCCCCCTGTCTCGGCTCACTTCGTGTAGCCGGAACCCCCCAAGGGGGGCGGCGCCTGCGGCCGGGCGAAGCCCGTT CCGCGGCCCCTGCTTAACAA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTAALHTSALTSLPLLARGKVRDNYAVGQDRLLMVASDRLSAFDVILGEPIPGKGALLTQMALFWFAKLGHLCPNHLTGE APESVVTAAELPQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQESQSVCGVPLPAGLKNAGKLPEPIFTPAAKAEVG EHDENISYEQVEKVVGPELAAQIKKISIEIYKTAAAFALTKGIIIADTKFEFGLDENGTLTLMDEVLTPDSSRYWPIEGY EAAYAAGLNPPSYDKQFVRDWLEAVRINGKPWDKTPPSPQLPPDVVAKTAAKYQEALTRLAG
Sequences:
>Translated_302_residues MTAALHTSALTSLPLLARGKVRDNYAVGQDRLLMVASDRLSAFDVILGEPIPGKGALLTQMALFWFAKLGHLCPNHLTGE APESVVTAAELPQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQESQSVCGVPLPAGLKNAGKLPEPIFTPAAKAEVG EHDENISYEQVEKVVGPELAAQIKKISIEIYKTAAAFALTKGIIIADTKFEFGLDENGTLTLMDEVLTPDSSRYWPIEGY EAAYAAGLNPPSYDKQFVRDWLEAVRINGKPWDKTPPSPQLPPDVVAKTAAKYQEALTRLAG >Mature_301_residues TAALHTSALTSLPLLARGKVRDNYAVGQDRLLMVASDRLSAFDVILGEPIPGKGALLTQMALFWFAKLGHLCPNHLTGEA PESVVTAAELPQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQESQSVCGVPLPAGLKNAGKLPEPIFTPAAKAEVGE HDENISYEQVEKVVGPELAAQIKKISIEIYKTAAAFALTKGIIIADTKFEFGLDENGTLTLMDEVLTPDSSRYWPIEGYE AAYAAGLNPPSYDKQFVRDWLEAVRINGKPWDKTPPSPQLPPDVVAKTAAKYQEALTRLAG
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=300, Percent_Identity=47.6666666666667, Blast_Score=268, Evalue=6e-73,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 32665; Mature: 32534
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALHTSALTSLPLLARGKVRDNYAVGQDRLLMVASDRLSAFDVILGEPIPGKGALLTQ CCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHH MALFWFAKLGHLCPNHLTGEAPESVVTAAELPQVTGRSMLVKRLKPLPVEAVVRGYLAGS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC GWKEYQESQSVCGVPLPAGLKNAGKLPEPIFTPAAKAEVGEHDENISYEQVEKVVGPELA CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHH AQIKKISIEIYKTAAAFALTKGIIIADTKFEFGLDENGTLTLMDEVLTPDSSRYWPIEGY HHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEHHHHCCCCCCCCCCCCC EAAYAAGLNPPSYDKQFVRDWLEAVRINGKPWDKTPPSPQLPPDVVAKTAAKYQEALTRL CHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AG CC >Mature Secondary Structure TAALHTSALTSLPLLARGKVRDNYAVGQDRLLMVASDRLSAFDVILGEPIPGKGALLTQ CCCHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHH MALFWFAKLGHLCPNHLTGEAPESVVTAAELPQVTGRSMLVKRLKPLPVEAVVRGYLAGS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC GWKEYQESQSVCGVPLPAGLKNAGKLPEPIFTPAAKAEVGEHDENISYEQVEKVVGPELA CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHH AQIKKISIEIYKTAAAFALTKGIIIADTKFEFGLDENGTLTLMDEVLTPDSSRYWPIEGY HHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEHHHHCCCCCCCCCCCCC EAAYAAGLNPPSYDKQFVRDWLEAVRINGKPWDKTPPSPQLPPDVVAKTAAKYQEALTRL CHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA