Click here to switch to the map view.

The map label for this gene is omlA [H]

Identifier: 91790438

GI number: 91790438

Start: 4889616

End: 4890128

Strand: Reverse

Name: omlA [H]

Synonym: Bpro_4609

Alternate gene names: 91790438

Gene position: 4890128-4889616 (Counterclockwise)

Preceding gene: 91790440

Following gene: 91790437

Centisome position: 94.04

GC content: 63.35

Gene sequence:

>513_bases
TTGGCATGCGCGGTGCTGGCGTCCTGCAGCAGCGCGATCAATCCGGTCAACTGGGTGACCCCCTACAAGGTGGATGTGAT
CCAGGGCAACTTCATCTCCAGTGAGCAGGTTGAGCAGCTGCGGCCCGGCATGAGCCGCGACCAGGTCCGGGCAGTTCTCG
GTACGCCCCTGATGGCGAGCCTTTTCCATGCCGACCGCTGGGACTATGTCTTCACGCTGAAGCGGCAAGGCGTTGACTCC
CAGACCTACAAATACACCGTGTTCTTCAACGGTGACCAGCTCGAGCGCTTTGCCGGCGACGCCATGCCCAGCGAGGCGGA
GTTCATCGCCAAGCTGGACAACAAGCGCAAACTGGGCAAAGTCCCTCCGCTGGAAGCCACCGAAGAGCAATTGAAGGCCG
CCGAGAAGCCGTCTGCTGCCAAGCCCGCCGCAGGGTCTGCCGCCGCCGTTGCCGCACCGCCGGCAAGCCCGCAAACCACG
GTCTACCCACCGCTCGAAAGCCCGAAACAGTGA

Upstream 100 bases:

>100_bases
GGTCGGGATGCACCCAGCCGCTACAATGATCAATCATATCGCTACACCCAATTCCATGTCTGCAAATCATCATTACAGCA
TCCAAACAGCTTCCATCGTC

Downstream 100 bases:

>100_bases
GCGGGGGCATGATGGACGCTCGCCCCCACCGTATCGCGGTAGCCGGCGCCAGTGGCCGCATGGGCCACATGCTGATTGAA
GCGGTGAGCGCCAGCAGCGA

Product: SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MACAVLASCSSAINPVNWVTPYKVDVIQGNFISSEQVEQLRPGMSRDQVRAVLGTPLMASLFHADRWDYVFTLKRQGVDS
QTYKYTVFFNGDQLERFAGDAMPSEAEFIAKLDNKRKLGKVPPLEATEEQLKAAEKPSAAKPAAGSAAAVAAPPASPQTT
VYPPLESPKQ

Sequences:

>Translated_170_residues
MACAVLASCSSAINPVNWVTPYKVDVIQGNFISSEQVEQLRPGMSRDQVRAVLGTPLMASLFHADRWDYVFTLKRQGVDS
QTYKYTVFFNGDQLERFAGDAMPSEAEFIAKLDNKRKLGKVPPLEATEEQLKAAEKPSAAKPAAGSAAAVAAPPASPQTT
VYPPLESPKQ
>Mature_169_residues
ACAVLASCSSAINPVNWVTPYKVDVIQGNFISSEQVEQLRPGMSRDQVRAVLGTPLMASLFHADRWDYVFTLKRQGVDSQ
TYKYTVFFNGDQLERFAGDAMPSEAEFIAKLDNKRKLGKVPPLEATEEQLKAAEKPSAAKPAAGSAAAVAAPPASPQTTV
YPPLESPKQ

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 18430; Mature: 18299

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACAVLASCSSAINPVNWVTPYKVDVIQGNFISSEQVEQLRPGMSRDQVRAVLGTPLMAS
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHH
LFHADRWDYVFTLKRQGVDSQTYKYTVFFNGDQLERFAGDAMPSEAEFIAKLDNKRKLGK
HHHCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCC
VPPLEATEEQLKAAEKPSAAKPAAGSAAAVAAPPASPQTTVYPPLESPKQ
CCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
ACAVLASCSSAINPVNWVTPYKVDVIQGNFISSEQVEQLRPGMSRDQVRAVLGTPLMAS
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHH
LFHADRWDYVFTLKRQGVDSQTYKYTVFFNGDQLERFAGDAMPSEAEFIAKLDNKRKLGK
HHHCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCC
VPPLEATEEQLKAAEKPSAAKPAAGSAAAVAAPPASPQTTVYPPLESPKQ
CCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]