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The map label for this gene is dapB [H]

Identifier: 91790437

GI number: 91790437

Start: 4888792

End: 4889604

Strand: Reverse

Name: dapB [H]

Synonym: Bpro_4608

Alternate gene names: 91790437

Gene position: 4889604-4888792 (Counterclockwise)

Preceding gene: 91790438

Following gene: 91790436

Centisome position: 94.03

GC content: 65.31

Gene sequence:

>813_bases
ATGGACGCTCGCCCCCACCGTATCGCGGTAGCCGGCGCCAGTGGCCGCATGGGCCACATGCTGATTGAAGCGGTGAGCGC
CAGCAGCGACTGCCTGCTGACGGGCGCGCTCGACGTGGCCGCCAGCCCGGCCATCGGTATGGATGCAGCGGCATTTTCCG
GACTGACCAGCGGTGTTCCCATCAGTGCCGATGTCCGCCAGGGTTTGCAAAACGCTGGCGTACTGATCGATTTCACCCGC
CCCGAAGGCACGCTGGCGCACCTGAAGGTGTGCCGTGAACTCGGCGTCAAGCTGGTGATAGGCACCACCGGCTTTTCAGA
AGCGCAGAAGGCCGAGATAGCCGCAGCCGCCAAAGACATTGCCATCGTCATGGCCCCCAACATGAGCGTGGGCGTCAACG
TCACGCTCAAGCTGCTGGAGATGGCCGCCAGGGCGCTGTCCACAGGCTACGACATCGAAATCATTGAGGCCCACCATCGC
CACAAGGTGGATGCGCCCTCGGGCACCGCCCTCAAGATGGGCGAAGTGATTGCCGGCGCGCTGGGCCGCGACCTGAAGGA
TTGCGCCGTCTACGCCCGCGAAGGCGTCACCGGCGAACGCGACCCCTCCAGCATCGGCTTTGCCACCATCCGCGGCGGCG
ACATCGTGGGTGACCACACGGTACTGTTTGCCGGCACCGGCGAGCGCATCGAGATCACCCACAAGTCATCGAGCCGGGCC
ACCTACGCGCAGGGCAGCCTGCGCGCCGCCCGTTTCCTGGCCGGCCAGCCCAGCGGCCTGTTTGACATGTTTGACGTCCT
CAACCTGAAATGA

Upstream 100 bases:

>100_bases
CCGCCGCAGGGTCTGCCGCCGCCGTTGCCGCACCGCCGGCAAGCCCGCAAACCACGGTCTACCCACCGCTCGAAAGCCCG
AAACAGTGAGCGGGGGCATG

Downstream 100 bases:

>100_bases
GCCCCGCCGAACGCCGCGAAGGGCCGCCCCGAGCAAGTTCAGCCCCCCTGGGGGGCAGCGCATTACACGCAGTGAAAAGC
GTGGGGGCCAACGAACGCCG

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MDARPHRIAVAGASGRMGHMLIEAVSASSDCLLTGALDVAASPAIGMDAAAFSGLTSGVPISADVRQGLQNAGVLIDFTR
PEGTLAHLKVCRELGVKLVIGTTGFSEAQKAEIAAAAKDIAIVMAPNMSVGVNVTLKLLEMAARALSTGYDIEIIEAHHR
HKVDAPSGTALKMGEVIAGALGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSSSRA
TYAQGSLRAARFLAGQPSGLFDMFDVLNLK

Sequences:

>Translated_270_residues
MDARPHRIAVAGASGRMGHMLIEAVSASSDCLLTGALDVAASPAIGMDAAAFSGLTSGVPISADVRQGLQNAGVLIDFTR
PEGTLAHLKVCRELGVKLVIGTTGFSEAQKAEIAAAAKDIAIVMAPNMSVGVNVTLKLLEMAARALSTGYDIEIIEAHHR
HKVDAPSGTALKMGEVIAGALGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSSSRA
TYAQGSLRAARFLAGQPSGLFDMFDVLNLK
>Mature_270_residues
MDARPHRIAVAGASGRMGHMLIEAVSASSDCLLTGALDVAASPAIGMDAAAFSGLTSGVPISADVRQGLQNAGVLIDFTR
PEGTLAHLKVCRELGVKLVIGTTGFSEAQKAEIAAAAKDIAIVMAPNMSVGVNVTLKLLEMAARALSTGYDIEIIEAHHR
HKVDAPSGTALKMGEVIAGALGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSSSRA
TYAQGSLRAARFLAGQPSGLFDMFDVLNLK

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=265, Percent_Identity=60, Blast_Score=288, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 27979; Mature: 27979

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARPHRIAVAGASGRMGHMLIEAVSASSDCLLTGALDVAASPAIGMDAAAFSGLTSGVP
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCHHHHCCCCCCCC
ISADVRQGLQNAGVLIDFTRPEGTLAHLKVCRELGVKLVIGTTGFSEAQKAEIAAAAKDI
CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCE
AIVMAPNMSVGVNVTLKLLEMAARALSTGYDIEIIEAHHRHKVDAPSGTALKMGEVIAGA
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHH
LGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSSSRA
HCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCEEEEECCCCEEEEEECCCCCE
TYAQGSLRAARFLAGQPSGLFDMFDVLNLK
EECCCCHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDARPHRIAVAGASGRMGHMLIEAVSASSDCLLTGALDVAASPAIGMDAAAFSGLTSGVP
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCHHHHCCCCCCCC
ISADVRQGLQNAGVLIDFTRPEGTLAHLKVCRELGVKLVIGTTGFSEAQKAEIAAAAKDI
CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCE
AIVMAPNMSVGVNVTLKLLEMAARALSTGYDIEIIEAHHRHKVDAPSGTALKMGEVIAGA
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHH
LGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSSSRA
HCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCEEEEECCCCEEEEEECCCCCE
TYAQGSLRAARFLAGQPSGLFDMFDVLNLK
EECCCCHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA