| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is narI [H]
Identifier: 91790421
GI number: 91790421
Start: 4865355
End: 4866074
Strand: Reverse
Name: narI [H]
Synonym: Bpro_4592
Alternate gene names: 91790421
Gene position: 4866074-4865355 (Counterclockwise)
Preceding gene: 91790422
Following gene: 91790420
Centisome position: 93.57
GC content: 60.0
Gene sequence:
>720_bases ATGACCACGCTGCACGGTTTTCTTTTTGGTGTCTACCCCTACATCTGCCTGACGGTGTTTCTGCTCGGCAGCCTGATCCG CTTTGACCGCGACCAGTACACCTGGAAAAGCGATTCCTCGCAGCTGCTTCGCAGCGGCTTGCTGCGCTGGGGCAGCAACC TGTTCCATGTCGGCATCCTTTTCCTGTTTTTCGGCCATCTGGTGGGTTTGCTGGCACCGCACGCCTTTTACGCGCATTTT CTCGAAGCGTCAGTCAAGCAGAAGATCGCCATTTACTCGGGCGGTGCGTTCGGCATCCTGTGTTTTATCGGCCTGTCGAT GCTGATCTATCGCCGCGTCTTTGATCCGCGCATCCGTTACACCAGCCACAAAACCGACCTGGCCATCCTCCTGATTTTGT GGGTGCAGCTGGTGGTCGGGCTGATTACCCTGCCGTATTCGTGGGCGCATTCGGATGGCAGCGTGATGCTGATCCTGGCC GACTGGGCGCAGCGCATCCTCACGCTGCGGACGGTGGATTCTGCGGCGCTGGCCGGTCTGCCCTGGCCTTACCTTTTTCA CATCGTGTTCGGAATGACGATTTTCCTGCTGTTTCCGTTCAGCCGCCTCGTGCATGTCTGGAGCGGGTTCGCGTCGGTGG GCTATCTGCTTCGTCCCTACCAGGTGGTGCGTAGCCGGCGCCTGGGCGTTCCCGGGGCCAAGTCGCCCGACGGCCGCTAG
Upstream 100 bases:
>100_bases TGGTTTTTGACGGCTGCTCTTCCAAAGGCCAGGCCCGGCCCGACCAGGCGCAACCGATTCACATTGTGCGCAAGGTGCGT CCCACCCAAGGAGTACAAGC
Downstream 100 bases:
>100_bases GTACGCACTGCAAGAAACGAGGCTCCCTCCATGACTACACAAACGCTTTCTTCACCCGCCGCCGCCCAGGGCTGTGGCAG CGGTTCCTGCCAGTGTGCTT
Product: respiratory nitrate reductase subunit gamma
Products: NA
Alternate protein names: Cytochrome B-NR; Nitrate reductase A subunit gamma; Quinol-nitrate oxidoreductase subunit gamma [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTTLHGFLFGVYPYICLTVFLLGSLIRFDRDQYTWKSDSSQLLRSGLLRWGSNLFHVGILFLFFGHLVGLLAPHAFYAHF LEASVKQKIAIYSGGAFGILCFIGLSMLIYRRVFDPRIRYTSHKTDLAILLILWVQLVVGLITLPYSWAHSDGSVMLILA DWAQRILTLRTVDSAALAGLPWPYLFHIVFGMTIFLLFPFSRLVHVWSGFASVGYLLRPYQVVRSRRLGVPGAKSPDGR
Sequences:
>Translated_239_residues MTTLHGFLFGVYPYICLTVFLLGSLIRFDRDQYTWKSDSSQLLRSGLLRWGSNLFHVGILFLFFGHLVGLLAPHAFYAHF LEASVKQKIAIYSGGAFGILCFIGLSMLIYRRVFDPRIRYTSHKTDLAILLILWVQLVVGLITLPYSWAHSDGSVMLILA DWAQRILTLRTVDSAALAGLPWPYLFHIVFGMTIFLLFPFSRLVHVWSGFASVGYLLRPYQVVRSRRLGVPGAKSPDGR >Mature_238_residues TTLHGFLFGVYPYICLTVFLLGSLIRFDRDQYTWKSDSSQLLRSGLLRWGSNLFHVGILFLFFGHLVGLLAPHAFYAHFL EASVKQKIAIYSGGAFGILCFIGLSMLIYRRVFDPRIRYTSHKTDLAILLILWVQLVVGLITLPYSWAHSDGSVMLILAD WAQRILTLRTVDSAALAGLPWPYLFHIVFGMTIFLLFPFSRLVHVWSGFASVGYLLRPYQVVRSRRLGVPGAKSPDGR
Specific function: The nitrate reductase enzyme complex allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The gamma chain is a membrane-embedded heme-iron unit resembling cytochrome b, which transfers electrons from quinones to the beta subunit [
COG id: COG2181
COG function: function code C; Nitrate reductase gamma subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787480, Length=226, Percent_Identity=48.6725663716814, Blast_Score=216, Evalue=9e-58, Organism=Escherichia coli, GI1787738, Length=225, Percent_Identity=51.1111111111111, Blast_Score=215, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003816 [H]
Pfam domain/function: PF02665 Nitrate_red_gam [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 27088; Mature: 26957
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLHGFLFGVYPYICLTVFLLGSLIRFDRDQYTWKSDSSQLLRSGLLRWGSNLFHVGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH FLFFGHLVGLLAPHAFYAHFLEASVKQKIAIYSGGAFGILCFIGLSMLIYRRVFDPRIRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC TSHKTDLAILLILWVQLVVGLITLPYSWAHSDGSVMLILADWAQRILTLRTVDSAALAGL CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC PWPYLFHIVFGMTIFLLFPFSRLVHVWSGFASVGYLLRPYQVVRSRRLGVPGAKSPDGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTLHGFLFGVYPYICLTVFLLGSLIRFDRDQYTWKSDSSQLLRSGLLRWGSNLFHVGIL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH FLFFGHLVGLLAPHAFYAHFLEASVKQKIAIYSGGAFGILCFIGLSMLIYRRVFDPRIRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC TSHKTDLAILLILWVQLVVGLITLPYSWAHSDGSVMLILADWAQRILTLRTVDSAALAGL CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC PWPYLFHIVFGMTIFLLFPFSRLVHVWSGFASVGYLLRPYQVVRSRRLGVPGAKSPDGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2832376; 8905232; 9278503; 3053688; 12910261 [H]