| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is surA [H]
Identifier: 91790420
GI number: 91790420
Start: 4864455
End: 4865324
Strand: Reverse
Name: surA [H]
Synonym: Bpro_4591
Alternate gene names: 91790420
Gene position: 4865324-4864455 (Counterclockwise)
Preceding gene: 91790421
Following gene: 91790419
Centisome position: 93.56
GC content: 66.55
Gene sequence:
>870_bases ATGACTACACAAACGCTTTCTTCACCCGCCGCCGCCCAGGGCTGTGGCAGCGGTTCCTGCCAGTGTGCTTCTACCGCAGC CCAGCCCGCAGTGCCGGAGGCTTTGGTCAATGGCATCGCCCTGCATGCACCCGGGCAGTGTCCGGACACGGCCACGCTGC GCGAGCTGGCTTACGCCGAACTGCTGCGCCAGCAGGCGGTTCGGCAAGGTCTGTTGCCGCGTCATACCGGGCCAGACGCG CTCAGCGCACCGGAGCTGACCGAAGCCGAGCGCACCGTGATCGAAACCATGGTGGACCGCGAAGTGACCACCCCTCAGCC CACTGAAGAAGAGGGCCGGCGTTATTACGAAGCCCACAAGCCGCAGTTTGTCGTGGGCCAGGCGCTGCACGTGCGGCACA TCCTGTTTGCCGTCACCCCCGGCGTGAATGTCCAGGCGCTCACGGTGCATGCCGAGCGCGCCTTGCTGGAGCTCTCGCAT AAGGGCGTGCGCCCGGAGCGCTTTGCGCAACTGGCCGCCGAACTGTCCAACTGTCCCAGCAGCGCGCAGGGCGGCGACCT GGGCTGGATCGGTCCGGACGACTGTGCGCCCGAGCTGGCGACGGAACTGTTTCACCTCCAGCATGCGCAGACCGGCACGG GTGTGCATCCACGCCTGTTTCACACCCGCTTCGGCTTTCACATCATCGACGTGCTGGAGCGCCGCAGCGGCAGGCAGCCC GCCTATGAGGAGGTGCGCGAGCGCATTGCGGCGCTGCTGACCATGCAGTCGCGCGCCAGGGCGCTGCACCAGTACATGTG CCTGCTGGTGGGTGAGGCCGAGGTCGAAGGCATCACGCTGGAAGGGGCTGATTCGCCTCTGGTGCAATGA
Upstream 100 bases:
>100_bases TCGTCCCTACCAGGTGGTGCGTAGCCGGCGCCTGGGCGTTCCCGGGGCCAAGTCGCCCGACGGCCGCTAGGTACGCACTG CAAGAAACGAGGCTCCCTCC
Downstream 100 bases:
>100_bases ATGAAAACGCGGACCCCGCGGACGAACTGCTGTTGCGTCTGCGGCGTTTCCACTCCGACTATTTTCCGCTGCACCAGCAG CGCTTCCAGGACCTGGTGGC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDA LSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSH KGVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ
Sequences:
>Translated_289_residues MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDA LSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSH KGVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ >Mature_288_residues TTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDAL SAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHK GVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQPA YEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 31294; Mature: 31163
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAE CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHH LLRQQAVRQGLLPRHTGPDALSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHK HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHKGVRPERFAQLAAELSNCPS CCEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC SAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAE CCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHH LLRQQAVRQGLLPRHTGPDALSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHK HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHKGVRPERFAQLAAELSNCPS CCEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC SAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]