Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is surA [H]

Identifier: 91790420

GI number: 91790420

Start: 4864455

End: 4865324

Strand: Reverse

Name: surA [H]

Synonym: Bpro_4591

Alternate gene names: 91790420

Gene position: 4865324-4864455 (Counterclockwise)

Preceding gene: 91790421

Following gene: 91790419

Centisome position: 93.56

GC content: 66.55

Gene sequence:

>870_bases
ATGACTACACAAACGCTTTCTTCACCCGCCGCCGCCCAGGGCTGTGGCAGCGGTTCCTGCCAGTGTGCTTCTACCGCAGC
CCAGCCCGCAGTGCCGGAGGCTTTGGTCAATGGCATCGCCCTGCATGCACCCGGGCAGTGTCCGGACACGGCCACGCTGC
GCGAGCTGGCTTACGCCGAACTGCTGCGCCAGCAGGCGGTTCGGCAAGGTCTGTTGCCGCGTCATACCGGGCCAGACGCG
CTCAGCGCACCGGAGCTGACCGAAGCCGAGCGCACCGTGATCGAAACCATGGTGGACCGCGAAGTGACCACCCCTCAGCC
CACTGAAGAAGAGGGCCGGCGTTATTACGAAGCCCACAAGCCGCAGTTTGTCGTGGGCCAGGCGCTGCACGTGCGGCACA
TCCTGTTTGCCGTCACCCCCGGCGTGAATGTCCAGGCGCTCACGGTGCATGCCGAGCGCGCCTTGCTGGAGCTCTCGCAT
AAGGGCGTGCGCCCGGAGCGCTTTGCGCAACTGGCCGCCGAACTGTCCAACTGTCCCAGCAGCGCGCAGGGCGGCGACCT
GGGCTGGATCGGTCCGGACGACTGTGCGCCCGAGCTGGCGACGGAACTGTTTCACCTCCAGCATGCGCAGACCGGCACGG
GTGTGCATCCACGCCTGTTTCACACCCGCTTCGGCTTTCACATCATCGACGTGCTGGAGCGCCGCAGCGGCAGGCAGCCC
GCCTATGAGGAGGTGCGCGAGCGCATTGCGGCGCTGCTGACCATGCAGTCGCGCGCCAGGGCGCTGCACCAGTACATGTG
CCTGCTGGTGGGTGAGGCCGAGGTCGAAGGCATCACGCTGGAAGGGGCTGATTCGCCTCTGGTGCAATGA

Upstream 100 bases:

>100_bases
TCGTCCCTACCAGGTGGTGCGTAGCCGGCGCCTGGGCGTTCCCGGGGCCAAGTCGCCCGACGGCCGCTAGGTACGCACTG
CAAGAAACGAGGCTCCCTCC

Downstream 100 bases:

>100_bases
ATGAAAACGCGGACCCCGCGGACGAACTGCTGTTGCGTCTGCGGCGTTTCCACTCCGACTATTTTCCGCTGCACCAGCAG
CGCTTCCAGGACCTGGTGGC

Product: PpiC-type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDA
LSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSH
KGVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP
AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ

Sequences:

>Translated_289_residues
MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDA
LSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSH
KGVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP
AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ
>Mature_288_residues
TTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAELLRQQAVRQGLLPRHTGPDAL
SAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHK
GVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQPA
YEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ

Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PpiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000297
- InterPro:   IPR023034
- InterPro:   IPR015391
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 31294; Mature: 31163

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAE
CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHH
LLRQQAVRQGLLPRHTGPDALSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHKGVRPERFAQLAAELSNCPS
CCEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
SAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TTQTLSSPAAAQGCGSGSCQCASTAAQPAVPEALVNGIALHAPGQCPDTATLRELAYAE
CCCCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHH
LLRQQAVRQGLLPRHTGPDALSAPELTEAERTVIETMVDREVTTPQPTEEEGRRYYEAHK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHKGVRPERFAQLAAELSNCPS
CCEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
SAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERRSGRQP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AYEEVRERIAALLTMQSRARALHQYMCLLVGEAEVEGITLEGADSPLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]