| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hyi [H]
Identifier: 91790392
GI number: 91790392
Start: 4827521
End: 4828300
Strand: Direct
Name: hyi [H]
Synonym: Bpro_4562
Alternate gene names: 91790392
Gene position: 4827521-4828300 (Clockwise)
Preceding gene: 91790391
Following gene: 91790393
Centisome position: 92.83
GC content: 64.36
Gene sequence:
>780_bases ATGCCAAGATTTTCCGCCAACCTCAGCATGCTCTTCACCGAGCATGCTTTCCTCGACCGCTTTGAGCCTGCCGCGAAAGC CGGCTTCAAGGCCGTGGAGTTTCTTTTCCCCTATGCCTTCAGCATCGAAGACATCAAGTCCAGGCTGGACCGCCACGGCC TGAAGCTGGTGCTGCACAACCTGCCGGCCGGCAACTGGGAGGCCGGCGAGCGCGGCATCGCCTGCCACCCCGATCGCGTC GAGGAGTTTCGCGCCGGTGTGGCGCAGGCCATCACCTATGCCCAGGCGCTGGGCGTGCGCCAGCTCAACTGCCTGGCGGG CAAGGCGCCCGCGGGTGTCGACAACGCGCTGCTGCGGCAGACCTTTGTGGACAACCTGCGCCATGCGGCGGCGGCGTTGA AGAAGGCAGGTCTCAAGCTGCTGATCGAACCGATCAATACCTTTGACATCCCGGGCTTTTACCTGAACCGCACGGCGCAG GCGCTCGAAATTCTGGACGAAGTGCGGGCCGACAACGCCTTCGTGCAGTACGACATCTACCACGCGCAGCGCATGGAGGG CGAGCTGGCGGCGACCATGCAAAAGCATTTGCCGCGCATTGGCCACATCCAGCTGGCCGACAATCCGGGCCGCAACGAGC CGGGCACGGGCGAGATCAATTACGCGTTTCTGTTCGCGCACCTGGACCGCATCGGCTACGACGGCTGGATTGGCTGCGAA TACAAGCCTGCGGGCACCACGGAAGCCGGCCTCGGCTGGCGCGAACGCCTGGCAGCCTGA
Upstream 100 bases:
>100_bases GGCCGCGAGGGCCTGGAACTGGCCGGCCTGCTGGAGTAAGGCCGCGGCAACGCAGTCATCAACGCCCCCCTACTCACTTA TACCCACCCACAGACAAGAC
Downstream 100 bases:
>100_bases CCTTCATTTTTTTCGACAAGTTTTCGACAAGGACTTTCTGATGACTTCCCAACCCCTGAAAATCGGTTTTATCGGCCTCG GCATCATGGGCGCGCCCATG
Product: hydroxypyruvate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPRFSANLSMLFTEHAFLDRFEPAAKAGFKAVEFLFPYAFSIEDIKSRLDRHGLKLVLHNLPAGNWEAGERGIACHPDRV EEFRAGVAQAITYAQALGVRQLNCLAGKAPAGVDNALLRQTFVDNLRHAAAALKKAGLKLLIEPINTFDIPGFYLNRTAQ ALEILDEVRADNAFVQYDIYHAQRMEGELAATMQKHLPRIGHIQLADNPGRNEPGTGEINYAFLFAHLDRIGYDGWIGCE YKPAGTTEAGLGWRERLAA
Sequences:
>Translated_259_residues MPRFSANLSMLFTEHAFLDRFEPAAKAGFKAVEFLFPYAFSIEDIKSRLDRHGLKLVLHNLPAGNWEAGERGIACHPDRV EEFRAGVAQAITYAQALGVRQLNCLAGKAPAGVDNALLRQTFVDNLRHAAAALKKAGLKLLIEPINTFDIPGFYLNRTAQ ALEILDEVRADNAFVQYDIYHAQRMEGELAATMQKHLPRIGHIQLADNPGRNEPGTGEINYAFLFAHLDRIGYDGWIGCE YKPAGTTEAGLGWRERLAA >Mature_258_residues PRFSANLSMLFTEHAFLDRFEPAAKAGFKAVEFLFPYAFSIEDIKSRLDRHGLKLVLHNLPAGNWEAGERGIACHPDRVE EFRAGVAQAITYAQALGVRQLNCLAGKAPAGVDNALLRQTFVDNLRHAAAALKKAGLKLLIEPINTFDIPGFYLNRTAQA LEILDEVRADNAFVQYDIYHAQRMEGELAATMQKHLPRIGHIQLADNPGRNEPGTGEINYAFLFAHLDRIGYDGWIGCEY KPAGTTEAGLGWRERLAA
Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=258, Percent_Identity=43.7984496124031, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI300068964, Length=243, Percent_Identity=42.798353909465, Blast_Score=179, Evalue=2e-45, Organism=Escherichia coli, GI1786718, Length=255, Percent_Identity=60, Blast_Score=317, Evalue=7e-88, Organism=Escherichia coli, GI1789095, Length=253, Percent_Identity=45.8498023715415, Blast_Score=233, Evalue=9e-63, Organism=Caenorhabditis elegans, GI17552022, Length=257, Percent_Identity=38.9105058365759, Blast_Score=177, Evalue=6e-45, Organism=Drosophila melanogaster, GI17530883, Length=259, Percent_Identity=36.6795366795367, Blast_Score=166, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017643 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =5.3.1.22 [H]
Molecular weight: Translated: 28732; Mature: 28601
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFSANLSMLFTEHAFLDRFEPAAKAGFKAVEFLFPYAFSIEDIKSRLDRHGLKLVLHN CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPAGNWEAGERGIACHPDRVEEFRAGVAQAITYAQALGVRQLNCLAGKAPAGVDNALLRQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHH TFVDNLRHAAAALKKAGLKLLIEPINTFDIPGFYLNRTAQALEILDEVRADNAFVQYDIY HHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHH HAQRMEGELAATMQKHLPRIGHIQLADNPGRNEPGTGEINYAFLFAHLDRIGYDGWIGCE HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCC YKPAGTTEAGLGWRERLAA CCCCCCCCCCCCHHHHHCC >Mature Secondary Structure PRFSANLSMLFTEHAFLDRFEPAAKAGFKAVEFLFPYAFSIEDIKSRLDRHGLKLVLHN CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPAGNWEAGERGIACHPDRVEEFRAGVAQAITYAQALGVRQLNCLAGKAPAGVDNALLRQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHH TFVDNLRHAAAALKKAGLKLLIEPINTFDIPGFYLNRTAQALEILDEVRADNAFVQYDIY HHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHH HAQRMEGELAATMQKHLPRIGHIQLADNPGRNEPGTGEINYAFLFAHLDRIGYDGWIGCE HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCC YKPAGTTEAGLGWRERLAA CCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8440684; 10561547; 9278503 [H]