| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790352
Identifier: 91790352
GI number: 91790352
Start: 4779002
End: 4779898
Strand: Direct
Name: 91790352
Synonym: Bpro_4520
Alternate gene names: NA
Gene position: 4779002-4779898 (Clockwise)
Preceding gene: 91790351
Following gene: 91790353
Centisome position: 91.9
GC content: 62.1
Gene sequence:
>897_bases ATGAATATCCCCAAAATTTCCCATCGCACCCTCGGCACCTTGCTGATCGGCGCCAGCCTCACCATCGTGGCCGGTGCGGC CCGGGCTATTGACATTGACGCTGGCGACTACACCGCCTTGCCAGAGGGCACCAACGTGGGCTTGCTCTACATGCAGCACG CCAAGCGCAACAGCCTGTACGCCAACGGGCAACAAGTCCCCGGCAACAACGGGCTGGACTCGGACATTGGCATCCTGCGC CTGATCCACTTCACCAAAATTGGCGGCTATGTGGTCGATCCCCAACTGCTGCTGCCTTTCGGCCACCTCAAAGCCACGGG TGCGCTTGGCCCGGTGCTGGGCAAGGGTTCAGGCACGGGCGACCTGATCCTGGCCGCCACGGTGTGGACCATCAATGAGC CCGAGAACAAGCGCTATTTGGGCATCACACCTTTCCTGTTTGCCCCCACGGGCACTTATGACGCGGCCAAGGCGCTGAAC CTGGGTGAGAACCGCTGGAAATACGCGCTGCAGGTGGGCTACATCCAGGGAGTCGGCGACAAGCTGACTTTCGATCTGGC CGCCGATGTGACGGCTTATGGCCACAATGACCGCGCCAACCCGGCGGGCCAAACGCTCACGCAGGCACCCAGTTACCAGG TGCAAGGGTTTATGCGCTACGCACTGAGCCCCGGCTGGGACCTGCGGGCCGGTCTCTCGCGAACCCGCACCGGCGAAACC AAGCTCGATGGCAACAGCAGGGCAGACGCCTCGACCATTGACAAACTGCAACTGGGCACGGCAGTCTTCCTGACCCCGAA GACGCAATTGCTGGCCACCTGGGGACGTGACCTGTCCGTCAGCAATGGCTTCAAGGAAGCCTCGCGGGTGAACCTGCGCC TGCTGCAAGTATTCTGA
Upstream 100 bases:
>100_bases AAAGCCAGTGGGTCAGCGTGATGGACAAGCCCATCGTGTACCCGTTCTGATCCCTTTCCTGAGCCCTTTCCCATCGACAA CATACCCCCAGGAGACATAA
Downstream 100 bases:
>100_bases GCATTCCTCACTTCCATACCCCCTCCAAGGAGACAAGAGATGCCCTCCATGCAACACCAGGCCGCAGGCCCAGGCGATGC CTTCCTGCCCGCCATCAACG
Product: putative signal peptide
Products: NA
Alternate protein names: Phenol Degradation; Quinohemoprotein Alcohol Dehydrogenase; Signal Peptide-Containing Protein; QbdB Protein; Meta-Pathway Phenol Degradation-Like Protein; Alcohol Dehydrogenase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNIPKISHRTLGTLLIGASLTIVAGAARAIDIDAGDYTALPEGTNVGLLYMQHAKRNSLYANGQQVPGNNGLDSDIGILR LIHFTKIGGYVVDPQLLLPFGHLKATGALGPVLGKGSGTGDLILAATVWTINEPENKRYLGITPFLFAPTGTYDAAKALN LGENRWKYALQVGYIQGVGDKLTFDLAADVTAYGHNDRANPAGQTLTQAPSYQVQGFMRYALSPGWDLRAGLSRTRTGET KLDGNSRADASTIDKLQLGTAVFLTPKTQLLATWGRDLSVSNGFKEASRVNLRLLQVF
Sequences:
>Translated_298_residues MNIPKISHRTLGTLLIGASLTIVAGAARAIDIDAGDYTALPEGTNVGLLYMQHAKRNSLYANGQQVPGNNGLDSDIGILR LIHFTKIGGYVVDPQLLLPFGHLKATGALGPVLGKGSGTGDLILAATVWTINEPENKRYLGITPFLFAPTGTYDAAKALN LGENRWKYALQVGYIQGVGDKLTFDLAADVTAYGHNDRANPAGQTLTQAPSYQVQGFMRYALSPGWDLRAGLSRTRTGET KLDGNSRADASTIDKLQLGTAVFLTPKTQLLATWGRDLSVSNGFKEASRVNLRLLQVF >Mature_298_residues MNIPKISHRTLGTLLIGASLTIVAGAARAIDIDAGDYTALPEGTNVGLLYMQHAKRNSLYANGQQVPGNNGLDSDIGILR LIHFTKIGGYVVDPQLLLPFGHLKATGALGPVLGKGSGTGDLILAATVWTINEPENKRYLGITPFLFAPTGTYDAAKALN LGENRWKYALQVGYIQGVGDKLTFDLAADVTAYGHNDRANPAGQTLTQAPSYQVQGFMRYALSPGWDLRAGLSRTRTGET KLDGNSRADASTIDKLQLGTAVFLTPKTQLLATWGRDLSVSNGFKEASRVNLRLLQVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31913; Mature: 31913
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPKISHRTLGTLLIGASLTIVAGAARAIDIDAGDYTALPEGTNVGLLYMQHAKRNSLY CCCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCEEECCCCCCEEEEEEECCCCCCEE ANGQQVPGNNGLDSDIGILRLIHFTKIGGYVVDPQLLLPFGHLKATGALGPVLGKGSGTG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCCEEECCCCCCEECCCCCCC DLILAATVWTINEPENKRYLGITPFLFAPTGTYDAAKALNLGENRWKYALQVGYIQGVGD CEEEEEEEEEECCCCCCEEEECCCEEEECCCCCHHHHHHCCCCCCEEEEEEEEEEECCCC KLTFDLAADVTAYGHNDRANPAGQTLTQAPSYQVQGFMRYALSPGWDLRAGLSRTRTGET EEEEEEEECEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC KLDGNSRADASTIDKLQLGTAVFLTPKTQLLATWGRDLSVSNGFKEASRVNLRLLQVF CCCCCCCCCHHHHHHEECCEEEEECCCHHEEEECCCCCCCCCCCCHHHHCEEEEEEEC >Mature Secondary Structure MNIPKISHRTLGTLLIGASLTIVAGAARAIDIDAGDYTALPEGTNVGLLYMQHAKRNSLY CCCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCEEECCCCCCEEEEEEECCCCCCEE ANGQQVPGNNGLDSDIGILRLIHFTKIGGYVVDPQLLLPFGHLKATGALGPVLGKGSGTG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCCEEECCCCCCEECCCCCCC DLILAATVWTINEPENKRYLGITPFLFAPTGTYDAAKALNLGENRWKYALQVGYIQGVGD CEEEEEEEEEECCCCCCEEEECCCEEEECCCCCHHHHHHCCCCCCEEEEEEEEEEECCCC KLTFDLAADVTAYGHNDRANPAGQTLTQAPSYQVQGFMRYALSPGWDLRAGLSRTRTGET EEEEEEEECEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC KLDGNSRADASTIDKLQLGTAVFLTPKTQLLATWGRDLSVSNGFKEASRVNLRLLQVF CCCCCCCCCHHHHHHEECCEEEEECCCHHEEEECCCCCCCCCCCCHHHHCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA