| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790353
Identifier: 91790353
GI number: 91790353
Start: 4779938
End: 4780537
Strand: Direct
Name: 91790353
Synonym: Bpro_4521
Alternate gene names: NA
Gene position: 4779938-4780537 (Clockwise)
Preceding gene: 91790352
Following gene: 91790354
Centisome position: 91.92
GC content: 65.67
Gene sequence:
>600_bases ATGCCCTCCATGCAACACCAGGCCGCAGGCCCAGGCGATGCCTTCCTGCCCGCCATCAACGCCCTGCGGGGACTGTCACG GCGCGACTTTTTGCGTTTCTCCGGCGCCGGCGCCGCCGCTGCGCTGGCGGGCGGTGCCAGCTTCGCGGCACTGCCCGCCG GCGTGAAGTTCATCAACGAAGCAGAAGCCGCCATCTTCACGCGGCTGGCCCAAGTAGTGCTGCCGGTGGCCGGTAGTCCA CTGGTCCCGTGGACGCCTGACGGCTTGCTGCAAACGCTGGACGGCGCGCTGCTGGCCACCATGGCGCCACATATTTTGAC GGGCCTCAAAGGCGGCATGCAGTACTTCAACGACGGCCCCGTGGCCCTGTACAAAAAGCGTTTCACCGCGCTCGACGACG CCGAAGCCACGCAGTTCTGCGATGCCTGGGGCAATTCCAATCTGCCGCCGCAGCGCGGCCTGACGATGGGGCTGAAGAAG TTGATTCAACTGTCGTACTGGGCCAACCCGGCAAGCTGGGAACCCTTGGGTTACGACGGACCAATGACCAAGCGCCTGGG CCTGAAGTCCCTGGGCAACGCACCGCTGCCGACACGCTGA
Upstream 100 bases:
>100_bases CGTCAGCAATGGCTTCAAGGAAGCCTCGCGGGTGAACCTGCGCCTGCTGCAAGTATTCTGAGCATTCCTCACTTCCATAC CCCCTCCAAGGAGACAAGAG
Downstream 100 bases:
>100_bases ACATCACCATTCGAGGACACACCACATGAAAAAATCCATTCCCGTGAAGCTCGCCAAGCAGGGCCTCAAGGTCACGCAGG CCGGTGACATCACGCAGGAA
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPSMQHQAAGPGDAFLPAINALRGLSRRDFLRFSGAGAAAALAGGASFAALPAGVKFINEAEAAIFTRLAQVVLPVAGSP LVPWTPDGLLQTLDGALLATMAPHILTGLKGGMQYFNDGPVALYKKRFTALDDAEATQFCDAWGNSNLPPQRGLTMGLKK LIQLSYWANPASWEPLGYDGPMTKRLGLKSLGNAPLPTR
Sequences:
>Translated_199_residues MPSMQHQAAGPGDAFLPAINALRGLSRRDFLRFSGAGAAAALAGGASFAALPAGVKFINEAEAAIFTRLAQVVLPVAGSP LVPWTPDGLLQTLDGALLATMAPHILTGLKGGMQYFNDGPVALYKKRFTALDDAEATQFCDAWGNSNLPPQRGLTMGLKK LIQLSYWANPASWEPLGYDGPMTKRLGLKSLGNAPLPTR >Mature_198_residues PSMQHQAAGPGDAFLPAINALRGLSRRDFLRFSGAGAAAALAGGASFAALPAGVKFINEAEAAIFTRLAQVVLPVAGSPL VPWTPDGLLQTLDGALLATMAPHILTGLKGGMQYFNDGPVALYKKRFTALDDAEATQFCDAWGNSNLPPQRGLTMGLKKL IQLSYWANPASWEPLGYDGPMTKRLGLKSLGNAPLPTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20945; Mature: 20814
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMQHQAAGPGDAFLPAINALRGLSRRDFLRFSGAGAAAALAGGASFAALPAGVKFINE CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH AEAAIFTRLAQVVLPVAGSPLVPWTPDGLLQTLDGALLATMAPHILTGLKGGMQYFNDGP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VALYKKRFTALDDAEATQFCDAWGNSNLPPQRGLTMGLKKLIQLSYWANPASWEPLGYDG HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PMTKRLGLKSLGNAPLPTR CHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PSMQHQAAGPGDAFLPAINALRGLSRRDFLRFSGAGAAAALAGGASFAALPAGVKFINE CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH AEAAIFTRLAQVVLPVAGSPLVPWTPDGLLQTLDGALLATMAPHILTGLKGGMQYFNDGP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VALYKKRFTALDDAEATQFCDAWGNSNLPPQRGLTMGLKKLIQLSYWANPASWEPLGYDG HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PMTKRLGLKSLGNAPLPTR CHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA