| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dehH2 [H]
Identifier: 91790348
GI number: 91790348
Start: 4772243
End: 4772971
Strand: Direct
Name: dehH2 [H]
Synonym: Bpro_4516
Alternate gene names: 91790348
Gene position: 4772243-4772971 (Clockwise)
Preceding gene: 91790347
Following gene: 91790349
Centisome position: 91.77
GC content: 64.33
Gene sequence:
>729_bases ATGGAAAAACCCCGTGCGCTCGCCCCTGTCCCGATCCGGGGCGTGCTGTTTGATGCCTATGGCACGCTGTTCGACGTCTA CAGCGTGGGCCTGCTCGCGGAGCAGCTCTTTCCGGGCCAGGGGCAAACCTTGGGGCTGCTGTGGCGCGACAAGCAGATCG AGTACACACGCCTGGTCACCACCTGCAATGACGGTGCGCATTACCAGCCTTTCTGGGACCTGACCCGCTCCAGCCTGCGC TATGTCTGCAAGCGCCTGGCGCTGGACCTCACGCCCGAGCGCGAGCAGCGGCTCATGAACCAGTACCGGCACCTGTCGGC CTTTCCGGAAAACAAGGGCGTGCTGCAGGCGCTGAAAAAGCGCGGCATCGTCACCGGCATCCTGTCCAACGGCGATCCGT CGATGCTCGACGTGGCCGTGAAATCCGGCGGACTGGAAGGCCTGCTGGACCACGTGATCAGCGTGGACAGCATCCGCAAA TACAAGACGCACCCCGATGCCTATGCCTTGGGCCCGCAACACACCGGGCTGGACGTGCGGCAGATCGCTTTTGTCAGCTG CAACGGCTGGGACGCGCTGGCCGCCACCTGGTATGGCTACCAGACGCTCTGGATCAACCGCTACCAGTTGCCGTTTGAAG AGCTTGGCACCGCGCCCACGTACACCGGCAGCAGCCTGCGCGACGTGCTGACACTGCCGGGCATGAACCTGCCTGGCGCT GCGGCATGA
Upstream 100 bases:
>100_bases ATTTCTTCAGACACTCCATCAAACTACCCGGATAAAAGTCACAAATAAAACGATATTCAGTTAATTAATAACCAGCCTTG TATCAAATAAAGTAGAGCCT
Downstream 100 bases:
>100_bases CACCGCCTTCATACCCTCCAACGTTTTATTTTTTACAAGGGACGACCCACCATGACCACCACGACCACTGAACGCACGCC CGCCCACCGCCTCCAGGTGG
Product: haloacid dehalogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MEKPRALAPVPIRGVLFDAYGTLFDVYSVGLLAEQLFPGQGQTLGLLWRDKQIEYTRLVTTCNDGAHYQPFWDLTRSSLR YVCKRLALDLTPEREQRLMNQYRHLSAFPENKGVLQALKKRGIVTGILSNGDPSMLDVAVKSGGLEGLLDHVISVDSIRK YKTHPDAYALGPQHTGLDVRQIAFVSCNGWDALAATWYGYQTLWINRYQLPFEELGTAPTYTGSSLRDVLTLPGMNLPGA AA
Sequences:
>Translated_242_residues MEKPRALAPVPIRGVLFDAYGTLFDVYSVGLLAEQLFPGQGQTLGLLWRDKQIEYTRLVTTCNDGAHYQPFWDLTRSSLR YVCKRLALDLTPEREQRLMNQYRHLSAFPENKGVLQALKKRGIVTGILSNGDPSMLDVAVKSGGLEGLLDHVISVDSIRK YKTHPDAYALGPQHTGLDVRQIAFVSCNGWDALAATWYGYQTLWINRYQLPFEELGTAPTYTGSSLRDVLTLPGMNLPGA AA >Mature_242_residues MEKPRALAPVPIRGVLFDAYGTLFDVYSVGLLAEQLFPGQGQTLGLLWRDKQIEYTRLVTTCNDGAHYQPFWDLTRSSLR YVCKRLALDLTPEREQRLMNQYRHLSAFPENKGVLQALKKRGIVTGILSNGDPSMLDVAVKSGGLEGLLDHVISVDSIRK YKTHPDAYALGPQHTGLDVRQIAFVSCNGWDALAATWYGYQTLWINRYQLPFEELGTAPTYTGSSLRDVLTLPGMNLPGA AA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006388 - InterPro: IPR006328 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 26931; Mature: 26931
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPRALAPVPIRGVLFDAYGTLFDVYSVGLLAEQLFPGQGQTLGLLWRDKQIEYTRLVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEE TCNDGAHYQPFWDLTRSSLRYVCKRLALDLTPEREQRLMNQYRHLSAFPENKGVLQALKK ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGIVTGILSNGDPSMLDVAVKSGGLEGLLDHVISVDSIRKYKTHPDAYALGPQHTGLDVR CCCEEEEECCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEE QIAFVSCNGWDALAATWYGYQTLWINRYQLPFEELGTAPTYTGSSLRDVLTLPGMNLPGA EEEEEECCCCHHHHHHHHCEEEEEEEEEECCHHHHCCCCCCCCCHHHHHHHCCCCCCCCC AA CC >Mature Secondary Structure MEKPRALAPVPIRGVLFDAYGTLFDVYSVGLLAEQLFPGQGQTLGLLWRDKQIEYTRLVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEE TCNDGAHYQPFWDLTRSSLRYVCKRLALDLTPEREQRLMNQYRHLSAFPENKGVLQALKK ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGIVTGILSNGDPSMLDVAVKSGGLEGLLDHVISVDSIRKYKTHPDAYALGPQHTGLDVR CCCEEEEECCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEE QIAFVSCNGWDALAATWYGYQTLWINRYQLPFEELGTAPTYTGSSLRDVLTLPGMNLPGA EEEEEECCCCHHHHHHHHCEEEEEEEEEECCHHHHCCCCCCCCCHHHHHHHCCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512562 [H]