| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790289
Identifier: 91790289
GI number: 91790289
Start: 4709512
End: 4709829
Strand: Reverse
Name: 91790289
Synonym: Bpro_4456
Alternate gene names: NA
Gene position: 4709829-4709512 (Counterclockwise)
Preceding gene: 91790290
Following gene: 91790288
Centisome position: 90.57
GC content: 64.78
Gene sequence:
>318_bases ATGAGCACGGTAGTCGTCCAACATTGCGACACCATGGCCGACGTGCGCCGGCACATCGATGCGCTCGATGACCGCATCGT GGCCCTGCTGGCCGAGCGCAGCGGCTATGTGGCCCAGGCCGCGCGCATCAAGCAGCGCGCGGATCAGGTTTACGACCAGG CGCGCATCGATTTCATCATCGACCGCGTGCGTGCGCAGGCCAGGCAGGCCGGTGCCCCCGAGGCCGTCATGGAGGCGACC TACCGCGCCATGATTGCCGCATTCATCGAGTTTGAGCAGGGCGAATTCGCACGCCTGAAAGAAGGGGCAGGATCATGA
Upstream 100 bases:
>100_bases GCGTGGTGGCTGACTCGGTGCCCGAGCTGGAATGGAAAGAAACCGAAGCCAAGGCGCGCGCCTTGCTGCGCGCCAGCGAA CTGGTCGAGGAGGGCCTGGA
Downstream 100 bases:
>100_bases AACTCCTGATGATCGACAACTACGACAGCTTCACCTACAACATCGTCCAGTACTTTGGTGAGCTGGGCGCCGAGGTTGAA GTCTTTCGCAACGACGAGAT
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase Family Protein; Phospho-2-Dehydro-3-Deoxyheptonate Aldolase; Chorismate Mutase Type II; Chorismate Mutase Type II Family Protein
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSTVVVQHCDTMADVRRHIDALDDRIVALLAERSGYVAQAARIKQRADQVYDQARIDFIIDRVRAQARQAGAPEAVMEAT YRAMIAAFIEFEQGEFARLKEGAGS
Sequences:
>Translated_105_residues MSTVVVQHCDTMADVRRHIDALDDRIVALLAERSGYVAQAARIKQRADQVYDQARIDFIIDRVRAQARQAGAPEAVMEAT YRAMIAAFIEFEQGEFARLKEGAGS >Mature_104_residues STVVVQHCDTMADVRRHIDALDDRIVALLAERSGYVAQAARIKQRADQVYDQARIDFIIDRVRAQARQAGAPEAVMEATY RAMIAAFIEFEQGEFARLKEGAGS
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11712; Mature: 11581
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVVVQHCDTMADVRRHIDALDDRIVALLAERSGYVAQAARIKQRADQVYDQARIDFII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DRVRAQARQAGAPEAVMEATYRAMIAAFIEFEQGEFARLKEGAGS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure STVVVQHCDTMADVRRHIDALDDRIVALLAERSGYVAQAARIKQRADQVYDQARIDFII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DRVRAQARQAGAPEAVMEATYRAMIAAFIEFEQGEFARLKEGAGS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA