The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790202

Identifier: 91790202

GI number: 91790202

Start: 4608661

End: 4609635

Strand: Direct

Name: 91790202

Synonym: Bpro_4367

Alternate gene names: NA

Gene position: 4608661-4609635 (Clockwise)

Preceding gene: 91790201

Following gene: 91790204

Centisome position: 88.62

GC content: 55.08

Gene sequence:

>975_bases
ATGAGGACGCAACCCAGAATTCTCATCATTGGTGCCAACGGACAACTCGGCACCGAACTCTCAACCGCACTCGCTGAGCG
CCACGGCTCATACAACGTAATCACGAGTGATATGGTTCCTAGAGGCCGTCATGCGCACATCGCCCATGAAATGCTGGACG
TCACCGACGCGGGGCAGCTCAAGGACATTGTGAAACGCCATGGCATTACGCAGATTTACCATCTCGCTGCGGCACTATCG
GCCACCGGTGAGACCTCTCCTACGTGGGCATGGAATTTGAACATGGGCGGACTGCTCAACGTTCTGGAAACAGCACGCCA
CCACAAGCTGGACAAGGTGTTCTGGCCAAGCTCGATCGCGGCTTTTGGTCCCACCACACCGGCCGATGCAACGCCGCAGA
GTACGGTCATGGAACCCAGGACCGTGTACGGAATCTCCAAGCTCGCTGGAGAAGGCTGGTGTCGCTGGTATTTTGAAAAG
CACGGCGTGGACGTACGTAGCCTGCGCTACCCCGGCCTGATTTCGTATAAGACAAAGCCAGGCGGCGGCACGACTGACTA
TGCCATTGATATCTTCTATTCTGCACTTAAAGGCGAGCGATACAACTGCTTCCTTGCCGAAGACGAAGCGTTGCCGATGC
TCTATATGGACGATGCGGTGCGCGCAACACTTGAATTGATGGAGGCGCCGGCGGAATCAATTACCGAGCGTGGCAGTTAC
AACCTGGCAGGGATTAGCTTCACGCCCGGTGAAATTGCCGCAGAAATCCGCAAGCATCGCCCGAACTTCGAGGTCGCATA
CGAGCCGGACTTTAGACAGGAGATTGCAAGCAGTTGGCCAAATTCAATCGACAATACACGCGCGGAACGCGACTGGAAGT
GGAAATGCAAGTTTGACCTGCCCGCATTGGTGACAGATATGCTCAAGCATCTCCCTGAGTCCTCGAACATACCCTCCTCT
ATTGCACATGCTTAA

Upstream 100 bases:

>100_bases
CACGCATTCGCGTGCAGATCAGTGCCCAACACACCAAACAACAGCTCAATACCGCTCTCGATGCCTTTGCGCAAGCAGGT
AAAGAATTGGGAGTCACGGC

Downstream 100 bases:

>100_bases
TCGGATTGACTAAACAACGATGCGTGGGTGGTCCGCCATCACGCATTACGAAGCAACCGATCGAGTTAAGGCGTCATCGT
TTGCGCAGTGCGCAGCAGCT

Product: L-threonine 3-dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRTQPRILIIGANGQLGTELSTALAERHGSYNVITSDMVPRGRHAHIAHEMLDVTDAGQLKDIVKRHGITQIYHLAAALS
ATGETSPTWAWNLNMGGLLNVLETARHHKLDKVFWPSSIAAFGPTTPADATPQSTVMEPRTVYGISKLAGEGWCRWYFEK
HGVDVRSLRYPGLISYKTKPGGGTTDYAIDIFYSALKGERYNCFLAEDEALPMLYMDDAVRATLELMEAPAESITERGSY
NLAGISFTPGEIAAEIRKHRPNFEVAYEPDFRQEIASSWPNSIDNTRAERDWKWKCKFDLPALVTDMLKHLPESSNIPSS
IAHA

Sequences:

>Translated_324_residues
MRTQPRILIIGANGQLGTELSTALAERHGSYNVITSDMVPRGRHAHIAHEMLDVTDAGQLKDIVKRHGITQIYHLAAALS
ATGETSPTWAWNLNMGGLLNVLETARHHKLDKVFWPSSIAAFGPTTPADATPQSTVMEPRTVYGISKLAGEGWCRWYFEK
HGVDVRSLRYPGLISYKTKPGGGTTDYAIDIFYSALKGERYNCFLAEDEALPMLYMDDAVRATLELMEAPAESITERGSY
NLAGISFTPGEIAAEIRKHRPNFEVAYEPDFRQEIASSWPNSIDNTRAERDWKWKCKFDLPALVTDMLKHLPESSNIPSS
IAHA
>Mature_324_residues
MRTQPRILIIGANGQLGTELSTALAERHGSYNVITSDMVPRGRHAHIAHEMLDVTDAGQLKDIVKRHGITQIYHLAAALS
ATGETSPTWAWNLNMGGLLNVLETARHHKLDKVFWPSSIAAFGPTTPADATPQSTVMEPRTVYGISKLAGEGWCRWYFEK
HGVDVRSLRYPGLISYKTKPGGGTTDYAIDIFYSALKGERYNCFLAEDEALPMLYMDDAVRATLELMEAPAESITERGSY
NLAGISFTPGEIAAEIRKHRPNFEVAYEPDFRQEIASSWPNSIDNTRAERDWKWKCKFDLPALVTDMLKHLPESSNIPSS
IAHA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=321, Percent_Identity=43.3021806853583, Blast_Score=259, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24667531, Length=312, Percent_Identity=43.9102564102564, Blast_Score=274, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36045; Mature: 36045

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQPRILIIGANGQLGTELSTALAERHGSYNVITSDMVPRGRHAHIAHEMLDVTDAGQL
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHH
KDIVKRHGITQIYHLAAALSATGETSPTWAWNLNMGGLLNVLETARHHKLDKVFWPSSIA
HHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHEECCCCCC
AFGPTTPADATPQSTVMEPRTVYGISKLAGEGWCRWYFEKHGVDVRSLRYPGLISYKTKP
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEEEHHHCCCCHHHCCCCCEEEEECCC
GGGTTDYAIDIFYSALKGERYNCFLAEDEALPMLYMDDAVRATLELMEAPAESITERGSY
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCHHHHHHCCCC
NLAGISFTPGEIAAEIRKHRPNFEVAYEPDFRQEIASSWPNSIDNTRAERDWKWKCKFDL
EEEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCHHCCCCCCCCEEEEECCC
PALVTDMLKHLPESSNIPSSIAHA
HHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MRTQPRILIIGANGQLGTELSTALAERHGSYNVITSDMVPRGRHAHIAHEMLDVTDAGQL
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHH
KDIVKRHGITQIYHLAAALSATGETSPTWAWNLNMGGLLNVLETARHHKLDKVFWPSSIA
HHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHEECCCCCC
AFGPTTPADATPQSTVMEPRTVYGISKLAGEGWCRWYFEKHGVDVRSLRYPGLISYKTKP
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEEEHHHCCCCHHHCCCCCEEEEECCC
GGGTTDYAIDIFYSALKGERYNCFLAEDEALPMLYMDDAVRATLELMEAPAESITERGSY
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCHHHHHHCCCC
NLAGISFTPGEIAAEIRKHRPNFEVAYEPDFRQEIASSWPNSIDNTRAERDWKWKCKFDL
EEEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCHHCCCCCCCCEEEEECCC
PALVTDMLKHLPESSNIPSSIAHA
HHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA