| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is kbl [C]
Identifier: 91790201
GI number: 91790201
Start: 4607462
End: 4608664
Strand: Direct
Name: kbl [C]
Synonym: Bpro_4366
Alternate gene names: 91790201
Gene position: 4607462-4608664 (Clockwise)
Preceding gene: 91790199
Following gene: 91790202
Centisome position: 88.6
GC content: 58.94
Gene sequence:
>1203_bases ATGCTTACCACCGCTCATTTCTACGCGTCTCTCCGAGAGGAGTTGCAGCAAATCGAGGCCGCTGGCCTATTTAAGGTTGA ACGGCCGATCACCTCCGCCCAAAGCAGCATCGTTTCAACCGCTGACTCAACCGAGGTCATCAACCTCTGTGCGAATAACT ACCTGGGGCTGTCTTCCCACCGCGGAATACTAGAAGCCGCGCATGCAGCCCTAGCCACCCGTGGTTTCGGCCTGAGTTCG GTGCGGTTCATTTGCGGCACTCAGGACATCCACAAAGAGCTAGAGGCACGGCTGTCGAAGTTCCTGGGTACCGAGGACAC GATCCTCTACGGCTCGGCCTTTGATGCCAATGGGGGTCTCTTCGAGACCTTACTAGGCGCGGAGGATGCAATCATCAGCG ACGAGCTCAACCACGCCTCAATCATCGACGGCATCCGCCTGTGCAAAGCTAAGCGCTACCGTTATCGGCACGACGACATA GAGGATCTGCGGCACCAGCTGCGGGAGGCCGACGCCGCGGGCTCGCGACACAAGCTTGTGTTCACAGACGGCGTCTTCTC CATGGACGGCACTATTGCGCGCTTGGACGAGATTCGCGCCGTGTGCGACGAGTTCGGCGCCTTGTTGGGAGTTGACGACT CCCATGCCACCGGTTTTATCGGCAAGACAGGGCGCGGAACGCATGAATACCGAGGCCTGTTCGGCAAGATCGACATTATT ACCGGCACTCTCGGCAAGGCGCTTGGCGGCGCATCCGGTGGATTTACAAGCTCGAAGGCAGAAGTGATCGCATTGCTGCG TCAGCGCTCTCGGCCTTACCTCTTCTCCAACACGCTTGCACCTGTCATCGTCGGCGCGAGCATCAAGGTGCTTGACTTGC TTGAGGCAGACACCTGCTTGCGCGACAACCTCGAAGAAAACACTCGCTACTTCCGCGCCGGCCTCGCGGCGCGCGGATTC GACCTGAAGGCGGGCACTCAGCCCATCATCCCTGTGATGGTGTACGACGCAGAGACGTCGCAGCGCCTTGCGCGTCGTCT GCTGGAGCTGGGTGTCTACGTTACCGGCTTCTTCTACCCGGTAGTTCCGAAAGGGCAGGCACGCATTCGCGTGCAGATCA GTGCCCAACACACCAAACAACAGCTCAATACCGCTCTCGATGCCTTTGCGCAAGCAGGTAAAGAATTGGGAGTCACGGCA TGA
Upstream 100 bases:
>100_bases GATTTGCATATTCACGAATTGTTCGATATAGTGGACATACGGCGTTTATTAGTGGAAATCGCCAAAATGATGAATAACCC GATCCTAGCAGGACTACCCA
Downstream 100 bases:
>100_bases GGACGCAACCCAGAATTCTCATCATTGGTGCCAACGGACAACTCGGCACCGAACTCTCAACCGCACTCGCTGAGCGCCAC GGCTCATACAACGTAATCAC
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MLTTAHFYASLREELQQIEAAGLFKVERPITSAQSSIVSTADSTEVINLCANNYLGLSSHRGILEAAHAALATRGFGLSS VRFICGTQDIHKELEARLSKFLGTEDTILYGSAFDANGGLFETLLGAEDAIISDELNHASIIDGIRLCKAKRYRYRHDDI EDLRHQLREADAAGSRHKLVFTDGVFSMDGTIARLDEIRAVCDEFGALLGVDDSHATGFIGKTGRGTHEYRGLFGKIDII TGTLGKALGGASGGFTSSKAEVIALLRQRSRPYLFSNTLAPVIVGASIKVLDLLEADTCLRDNLEENTRYFRAGLAARGF DLKAGTQPIIPVMVYDAETSQRLARRLLELGVYVTGFFYPVVPKGQARIRVQISAQHTKQQLNTALDAFAQAGKELGVTA
Sequences:
>Translated_400_residues MLTTAHFYASLREELQQIEAAGLFKVERPITSAQSSIVSTADSTEVINLCANNYLGLSSHRGILEAAHAALATRGFGLSS VRFICGTQDIHKELEARLSKFLGTEDTILYGSAFDANGGLFETLLGAEDAIISDELNHASIIDGIRLCKAKRYRYRHDDI EDLRHQLREADAAGSRHKLVFTDGVFSMDGTIARLDEIRAVCDEFGALLGVDDSHATGFIGKTGRGTHEYRGLFGKIDII TGTLGKALGGASGGFTSSKAEVIALLRQRSRPYLFSNTLAPVIVGASIKVLDLLEADTCLRDNLEENTRYFRAGLAARGF DLKAGTQPIIPVMVYDAETSQRLARRLLELGVYVTGFFYPVVPKGQARIRVQISAQHTKQQLNTALDAFAQAGKELGVTA >Mature_400_residues MLTTAHFYASLREELQQIEAAGLFKVERPITSAQSSIVSTADSTEVINLCANNYLGLSSHRGILEAAHAALATRGFGLSS VRFICGTQDIHKELEARLSKFLGTEDTILYGSAFDANGGLFETLLGAEDAIISDELNHASIIDGIRLCKAKRYRYRHDDI EDLRHQLREADAAGSRHKLVFTDGVFSMDGTIARLDEIRAVCDEFGALLGVDDSHATGFIGKTGRGTHEYRGLFGKIDII TGTLGKALGGASGGFTSSKAEVIALLRQRSRPYLFSNTLAPVIVGASIKVLDLLEADTCLRDNLEENTRYFRAGLAARGF DLKAGTQPIIPVMVYDAETSQRLARRLLELGVYVTGFFYPVVPKGQARIRVQISAQHTKQQLNTALDAFAQAGKELGVTA
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=391, Percent_Identity=52.9411764705882, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI284448556, Length=417, Percent_Identity=49.1606714628297, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI4758668, Length=367, Percent_Identity=35.4223433242507, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI83977442, Length=374, Percent_Identity=33.6898395721925, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI83977440, Length=374, Percent_Identity=33.6898395721925, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI83977444, Length=374, Percent_Identity=33.6898395721925, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI119220554, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI4502025, Length=361, Percent_Identity=33.5180055401662, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI40316939, Length=361, Percent_Identity=33.5180055401662, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI5454084, Length=278, Percent_Identity=27.6978417266187, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1790046, Length=394, Percent_Identity=61.9289340101523, Blast_Score=507, Evalue=1e-145, Organism=Escherichia coli, GI1786993, Length=353, Percent_Identity=32.0113314447592, Blast_Score=166, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71994529, Length=398, Percent_Identity=56.78391959799, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI32566772, Length=403, Percent_Identity=31.5136476426799, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17560914, Length=392, Percent_Identity=29.5918367346939, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17560912, Length=394, Percent_Identity=30.2030456852792, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71982617, Length=316, Percent_Identity=23.1012658227848, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71982625, Length=316, Percent_Identity=23.1012658227848, Blast_Score=101, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6320267, Length=370, Percent_Identity=28.3783783783784, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320438, Length=381, Percent_Identity=27.5590551181102, Blast_Score=162, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6323954, Length=265, Percent_Identity=29.811320754717, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI24662918, Length=395, Percent_Identity=54.4303797468354, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI17137420, Length=342, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17136286, Length=377, Percent_Identity=32.0954907161804, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24653280, Length=279, Percent_Identity=27.5985663082437, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653276, Length=279, Percent_Identity=27.5985663082437, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653278, Length=279, Percent_Identity=27.5985663082437, Blast_Score=106, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43429; Mature: 43429
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTAHFYASLREELQQIEAAGLFKVERPITSAQSSIVSTADSTEVINLCANNYLGLSSH CCCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC RGILEAAHAALATRGFGLSSVRFICGTQDIHKELEARLSKFLGTEDTILYGSAFDANGGL CHHHHHHHHHHHHCCCCCCHHHHECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH FETLLGAEDAIISDELNHASIIDGIRLCKAKRYRYRHDDIEDLRHQLREADAAGSRHKLV HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE FTDGVFSMDGTIARLDEIRAVCDEFGALLGVDDSHATGFIGKTGRGTHEYRGLFGKIDII EECCEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHCCCCEEEEEE TGTLGKALGGASGGFTSSKAEVIALLRQRSRPYLFSNTLAPVIVGASIKVLDLLEADTCL ECHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCHHHHHHHHHHHH RDNLEENTRYFRAGLAARGFDLKAGTQPIIPVMVYDAETSQRLARRLLELGVYVTGFFYP HCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE VVPKGQARIRVQISAQHTKQQLNTALDAFAQAGKELGVTA CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCHHCCCCC >Mature Secondary Structure MLTTAHFYASLREELQQIEAAGLFKVERPITSAQSSIVSTADSTEVINLCANNYLGLSSH CCCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC RGILEAAHAALATRGFGLSSVRFICGTQDIHKELEARLSKFLGTEDTILYGSAFDANGGL CHHHHHHHHHHHHCCCCCCHHHHECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH FETLLGAEDAIISDELNHASIIDGIRLCKAKRYRYRHDDIEDLRHQLREADAAGSRHKLV HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE FTDGVFSMDGTIARLDEIRAVCDEFGALLGVDDSHATGFIGKTGRGTHEYRGLFGKIDII EECCEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHCCCCEEEEEE TGTLGKALGGASGGFTSSKAEVIALLRQRSRPYLFSNTLAPVIVGASIKVLDLLEADTCL ECHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCHHHHHHHHHHHH RDNLEENTRYFRAGLAARGFDLKAGTQPIIPVMVYDAETSQRLARRLLELGVYVTGFFYP HCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE VVPKGQARIRVQISAQHTKQQLNTALDAFAQAGKELGVTA CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]